RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 TRIM66O15016 1216 aa7.06□□□□□ -1.28
CKAP4-203ENST00000553039 FKTNO75072 461 aa7.06□□□□□ -1.28
CKAP4-203ENST00000553039 TBC1D8O95759 1140 aa7.06□□□□□ -1.28
CKAP4-203ENST00000553039 GMPSP49915 693 aaPredicted RBP7.06□□□□□ -1.28
CKAP4-203ENST00000553039 CXCL9Q07325 125 aa7.06□□□□□ -1.28
CKAP4-203ENST00000553039 SLC39A6Q13433 755 aa7.06□□□□□ -1.28
CKAP4-203ENST00000553039 NEUROD1Q13562 356 aa7.06□□□□□ -1.28
CKAP4-203ENST00000553039 OLFM4Q6UX06 510 aa7.06□□□□□ -1.28
CKAP4-203ENST00000553039 KRT26Q7Z3Y9 468 aa7.06□□□□□ -1.28
CKAP4-203ENST00000553039 GPIHBP1Q8IV16 184 aa7.06□□□□□ -1.28
CKAP4-203ENST00000553039 EFCAB3Q8N7B9 438 aa7.06□□□□□ -1.28
CKAP4-203ENST00000553039 NCAPD2Q15021 1401 aa7.06□□□□□ -1.28
CKAP4-203ENST00000553039 MYH14Q7Z406 1995 aaKnown RBP7.06□□□□□ -1.28
CKAP4-203ENST00000553039 CUL9Q8IWT3 2517 aa7.05□□□□□ -1.28
CKAP4-203ENST00000553039 RGPD2P0DJD1 1756 aa7.05□□□□□ -1.28
CKAP4-203ENST00000553039 CDHR2Q9BYE9 1310 aa7.05□□□□□ -1.28
CKAP4-203ENST00000553039 FER1L6Q2WGJ9 1857 aa7.05□□□□□ -1.28
CKAP4-203ENST00000553039 PPIP5K2O43314 1243 aa7.05□□□□□ -1.28
CKAP4-203ENST00000553039 SLC10A3P09131 477 aa7.05□□□□□ -1.28
CKAP4-203ENST00000553039 TM4SF4P48230 202 aa7.05□□□□□ -1.28
CKAP4-203ENST00000553039 HIRAP54198 1017 aaPredicted RBP7.05□□□□□ -1.28
CKAP4-203ENST00000553039 FKBP1BP68106 108 aa7.05□□□□□ -1.28
CKAP4-203ENST00000553039 PDE4DQ08499 809 aa7.05□□□□□ -1.28
CKAP4-203ENST00000553039 DDX27Q96GQ7 796 aaKnown RBP7.05□□□□□ -1.28
CKAP4-203ENST00000553039 TSPYL2Q9H2G4 693 aaPredicted RBP7.05□□□□□ -1.28
CKAP4-203ENST00000553039 THSD7BQ9C0I4 1608 aa7.05□□□□□ -1.28
CKAP4-203ENST00000553039 CAMTA2O94983 1202 aa7.04□□□□□ -1.28
CKAP4-203ENST00000553039 ALDH1A1P00352 501 aa7.04□□□□□ -1.28
CKAP4-203ENST00000553039 TNNT2P45379 298 aaPredicted RBP7.04□□□□□ -1.28
CKAP4-203ENST00000553039 RBM26Q5T8P6 1007 aaKnown RBP7.04□□□□□ -1.28
CKAP4-203ENST00000553039 NBPF11Q86T75 865 aa7.04□□□□□ -1.28
CKAP4-203ENST00000553039 DZIP3Q86Y13 1208 aaKnown RBP7.04□□□□□ -1.28
CKAP4-203ENST00000553039 SULF1Q8IWU6 871 aa7.04□□□□□ -1.28
CKAP4-203ENST00000553039 KRI1Q8N9T8 703 aaKnown RBP7.04□□□□□ -1.28
CKAP4-203ENST00000553039 DPF2Q92785 391 aa7.04□□□□□ -1.28
CKAP4-203ENST00000553039 RPGRQ92834 1020 aaKnown RBP7.04□□□□□ -1.28
CKAP4-203ENST00000553039 OTUD5Q96G74 571 aa7.04□□□□□ -1.28
CKAP4-203ENST00000553039 RBM17Q96I25 401 aaKnown RBP7.04□□□□□ -1.28
CKAP4-203ENST00000553039 LGR6Q9HBX8 967 aa7.04□□□□□ -1.28
CKAP4-203ENST00000553039 ADAMTSL1Q8N6G6 1762 aa7.04□□□□□ -1.28
CKAP4-203ENST00000553039 LTBP1Q14766 1721 aa7.04□□□□□ -1.28
CKAP4-203ENST00000553039 POTEFA5A3E0 1075 aa7.03□□□□□ -1.28
CKAP4-203ENST00000553039 H0YGN5 161 aa7.03□□□□□ -1.28
CKAP4-203ENST00000553039 RNMTO43148 476 aaKnown RBP7.03□□□□□ -1.28
CKAP4-203ENST00000553039 EN2P19622 333 aaPredicted RBP7.03□□□□□ -1.28
CKAP4-203ENST00000553039 ARHGEF6Q15052 776 aa7.03□□□□□ -1.28
CKAP4-203ENST00000553039 TESK2Q96S53 571 aa7.03□□□□□ -1.28
CKAP4-203ENST00000553039 NYXQ9GZU5 481 aa7.03□□□□□ -1.28
CKAP4-203ENST00000553039 C1orf115Q9H7X2 142 aa7.03□□□□□ -1.28
CKAP4-203ENST00000553039 NIP7Q9Y221 180 aaKnown RBP eCLIP7.03□□□□□ -1.28
CKAP4-203ENST00000553039 NPC1L1Q9UHC9 1359 aa7.03□□□□□ -1.28
CKAP4-203ENST00000553039 A1BGP04217 495 aa7.02□□□□□ -1.29
CKAP4-203ENST00000553039 HOXA10P31260 410 aaPredicted RBP7.02□□□□□ -1.29
CKAP4-203ENST00000553039 INHBEP58166 350 aa7.02□□□□□ -1.29
CKAP4-203ENST00000553039 SREBF2Q12772 1141 aa7.02□□□□□ -1.29
CKAP4-203ENST00000553039 MKRN3Q13064 507 aaKnown RBP7.02□□□□□ -1.29
CKAP4-203ENST00000553039 SULT6B1Q6IMI4 303 aa7.02□□□□□ -1.29
CKAP4-203ENST00000553039 DPF3Q92784 378 aa7.02□□□□□ -1.29
CKAP4-203ENST00000553039 CRAMP1Q96RY5 1269 aa7.02□□□□□ -1.29
CKAP4-203ENST00000553039 TRIM17Q9Y577 477 aa7.02□□□□□ -1.29
CKAP4-203ENST00000553039 NRXN2Q9P2S2 1712 aa7.01□□□□□ -1.29
CKAP4-203ENST00000553039 SLX4Q8IY92 1834 aa7.01□□□□□ -1.29
CKAP4-203ENST00000553039 FAM177BA6PVY3 158 aa7.01□□□□□ -1.29
CKAP4-203ENST00000553039 RAD17O75943 681 aa7.01□□□□□ -1.29
CKAP4-203ENST00000553039 FLIIQ13045 1269 aa7.01□□□□□ -1.29
CKAP4-203ENST00000553039 AOC3Q16853 763 aa7.01□□□□□ -1.29
CKAP4-203ENST00000553039 SLC4A8Q2Y0W8 1093 aa7.01□□□□□ -1.29
CKAP4-203ENST00000553039 CRY2Q49AN0 593 aa7.01□□□□□ -1.29
CKAP4-203ENST00000553039 CHRDL2Q6WN34 429 aa7.01□□□□□ -1.29
CKAP4-203ENST00000553039 MICALL2Q8IY33 904 aa7.01□□□□□ -1.29
CKAP4-203ENST00000553039 FMNL2Q96PY5 1086 aa7.01□□□□□ -1.29
CKAP4-203ENST00000553039 SIN3AQ96ST3 1273 aa7.01□□□□□ -1.29
CKAP4-203ENST00000553039 CARD14Q9BXL6 1004 aa7.01□□□□□ -1.29
CKAP4-203ENST00000553039 CFHR5Q9BXR6 569 aa7.01□□□□□ -1.29
CKAP4-203ENST00000553039 NR2E3Q9Y5X4 410 aa7.01□□□□□ -1.29
CKAP4-203ENST00000553039 TRIOBPQ9H2D6 2365 aa7□□□□□ -1.29
CKAP4-203ENST00000553039 AFDNP55196 1824 aaKnown RBP7□□□□□ -1.29
CKAP4-203ENST00000553039 PITPNM1O00562 1244 aa7□□□□□ -1.29
CKAP4-203ENST00000553039 TCERG1O14776 1098 aaKnown RBP7□□□□□ -1.29
CKAP4-203ENST00000553039 BBOX1O75936 387 aa7□□□□□ -1.29
CKAP4-203ENST00000553039 RPS12P25398 132 aaKnown RBP7□□□□□ -1.29
CKAP4-203ENST00000553039 MLLT3P42568 568 aaPredicted RBP7□□□□□ -1.29
CKAP4-203ENST00000553039 TCIRG1Q13488 830 aa7□□□□□ -1.29
CKAP4-203ENST00000553039 ZNF790Q6PG37 636 aa7□□□□□ -1.29
CKAP4-203ENST00000553039 SAMD7Q7Z3H4 446 aa7□□□□□ -1.29
CKAP4-203ENST00000553039 RASAL3Q86YV0 1011 aa7□□□□□ -1.29
CKAP4-203ENST00000553039 TRPM4Q8TD43 1214 aa7□□□□□ -1.29
CKAP4-203ENST00000553039 ARMC5Q96C12 935 aa7□□□□□ -1.29
CKAP4-203ENST00000553039 ZNF496Q96IT1 587 aaPredicted RBP7□□□□□ -1.29
CKAP4-203ENST00000553039 RBM27Q9P2N5 1060 aaKnown RBP7□□□□□ -1.29
CKAP4-203ENST00000553039 PTPN22Q9Y2R2 807 aa7□□□□□ -1.29
CKAP4-203ENST00000553039 ATP6V0A2Q9Y487 856 aa7□□□□□ -1.29
CKAP4-203ENST00000553039 COL5A3P25940 1745 aaPredicted RBP7□□□□□ -1.29
CKAP4-203ENST00000553039 TRPM7Q96QT4 1865 aa7□□□□□ -1.29
CKAP4-203ENST00000553039 DLEC1Q9Y238 1755 aa7□□□□□ -1.29
CKAP4-203ENST00000553039 KIF7Q2M1P5 1343 aa7□□□□□ -1.29
CKAP4-203ENST00000553039 A0A1W2PPC1 479 aa6.99□□□□□ -1.29
CKAP4-203ENST00000553039 PRAMEF22A3QJZ6 481 aa6.99□□□□□ -1.29
CKAP4-203ENST00000553039 PPEF1O14829 653 aaPredicted RBP6.99□□□□□ -1.29
CKAP4-203ENST00000553039 TEFQ10587 303 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms