RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 ZNRF3Q9ULT6 936 aa14.92□□□□□ -0.02
NEK3-204ENST00000552973 ABT1Q9ULW3 272 aaKnown RBP14.92□□□□□ -0.02
NEK3-204ENST00000552973 RAD17O75943 681 aa14.91□□□□□ -0.02
NEK3-204ENST00000552973 HOXB7P09629 217 aa14.91□□□□□ -0.02
NEK3-204ENST00000552973 DEFB115Q30KQ5 88 aa14.91□□□□□ -0.02
NEK3-204ENST00000552973 SCN4AP35499 1836 aa14.91□□□□□ -0.02
NEK3-204ENST00000552973 TRAF5O00463 557 aa14.9□□□□□ -0.02
NEK3-204ENST00000552973 FOXN1O15353 648 aa14.9□□□□□ -0.02
NEK3-204ENST00000552973 GMPSP49915 693 aaPredicted RBP14.9□□□□□ -0.02
NEK3-204ENST00000552973 KIAA2012Q0VF49 1180 aa14.9□□□□□ -0.02
NEK3-204ENST00000552973 USP50Q70EL3 339 aaPredicted RBP14.9□□□□□ -0.02
NEK3-204ENST00000552973 CELF1Q92879 486 aaKnown RBP14.9□□□□□ -0.02
NEK3-204ENST00000552973 VPS33BQ9H267 617 aa14.9□□□□□ -0.02
NEK3-204ENST00000552973 PHAXQ9H814 394 aaKnown RBP14.9□□□□□ -0.02
NEK3-204ENST00000552973 HYPKQ9NX55 129 aa14.9□□□□□ -0.02
NEK3-204ENST00000552973 ZNF853P0CG23 659 aa14.89□□□□□ -0.03
NEK3-204ENST00000552973 CIAPIN1Q6FI81 312 aa14.89□□□□□ -0.03
NEK3-204ENST00000552973 RIC3Q7Z5B4 369 aa14.89□□□□□ -0.03
NEK3-204ENST00000552973 BCL2L13Q9BXK5 485 aa14.89□□□□□ -0.03
NEK3-204ENST00000552973 GPRC5DQ9NZD1 345 aa14.89□□□□□ -0.03
NEK3-204ENST00000552973 NSFL1CQ9UNZ2 370 aaKnown RBP14.89□□□□□ -0.03
NEK3-204ENST00000552973 RASSF10A6NK89 507 aa14.88□□□□□ -0.03
NEK3-204ENST00000552973 IRS4O14654 1257 aaPredicted RBP14.88□□□□□ -0.03
NEK3-204ENST00000552973 RIMBP2O15034 1052 aa14.88□□□□□ -0.03
NEK3-204ENST00000552973 GRM1Q13255 1194 aa14.88□□□□□ -0.03
NEK3-204ENST00000552973 PAXIP1Q6ZW49 1069 aaPredicted RBP14.88□□□□□ -0.03
NEK3-204ENST00000552973 JARID2Q92833 1246 aaPredicted RBP14.88□□□□□ -0.03
NEK3-204ENST00000552973 ADARB2Q9NS39 739 aaKnown RBP14.88□□□□□ -0.03
NEK3-204ENST00000552973 LTBP1Q14766 1721 aa14.88□□□□□ -0.03
NEK3-204ENST00000552973 SHTN1A0MZ66 631 aa14.87□□□□□ -0.03
NEK3-204ENST00000552973 YDJCA8MPS7 323 aa14.87□□□□□ -0.03
NEK3-204ENST00000552973 GNAI1P63096 354 aa14.87□□□□□ -0.03
NEK3-204ENST00000552973 SF3B3Q15393 1217 aaKnown RBP14.87□□□□□ -0.03
NEK3-204ENST00000552973 C8orf58Q8NAV2 365 aa14.87□□□□□ -0.03
NEK3-204ENST00000552973 AIDAQ96BJ3 306 aa14.87□□□□□ -0.03
NEK3-204ENST00000552973 MYD88Q99836 296 aa14.87□□□□□ -0.03
NEK3-204ENST00000552973 IFT57Q9NWB7 429 aa14.87□□□□□ -0.03
NEK3-204ENST00000552973 WDR33Q9C0J8 1336 aaKnown RBP14.87□□□□□ -0.03
NEK3-204ENST00000552973 ADAMTSL1Q8N6G6 1762 aa14.86□□□□□ -0.03
NEK3-204ENST00000552973 C6orf229H3BNL8 230 aa14.86□□□□□ -0.03
NEK3-204ENST00000552973 GPSM2P81274 684 aa14.86□□□□□ -0.03
NEK3-204ENST00000552973 GOLGA2Q08379 1002 aa14.86□□□□□ -0.03
NEK3-204ENST00000552973 WASHC4Q2M389 1173 aa14.86□□□□□ -0.03
NEK3-204ENST00000552973 CST9Q5W186 159 aa14.86□□□□□ -0.03
NEK3-204ENST00000552973 GPR101Q96P66 508 aaPredicted RBP14.86□□□□□ -0.03
NEK3-204ENST00000552973 DBNDD1Q9H9R9 158 aa14.86□□□□□ -0.03
NEK3-204ENST00000552973 WBP1LQ9NX94 342 aa14.86□□□□□ -0.03
NEK3-204ENST00000552973 ZBTB12Q9Y330 459 aaPredicted RBP14.86□□□□□ -0.03
NEK3-204ENST00000552973 CTCFP49711 727 aaPredicted RBP14.85□□□□□ -0.03
NEK3-204ENST00000552973 HIRAP54198 1017 aaPredicted RBP14.85□□□□□ -0.03
NEK3-204ENST00000552973 TRIM28Q13263 835 aaKnown RBP14.85□□□□□ -0.03
NEK3-204ENST00000552973 TNIP1Q15025 636 aa14.85□□□□□ -0.03
NEK3-204ENST00000552973 DOK7Q18PE1 504 aa14.85□□□□□ -0.03
NEK3-204ENST00000552973 CCDC184Q52MB2 194 aa14.85□□□□□ -0.03
NEK3-204ENST00000552973 CYP4F22Q6NT55 531 aa14.85□□□□□ -0.03
NEK3-204ENST00000552973 TMC4Q7Z404 712 aa14.85□□□□□ -0.03
NEK3-204ENST00000552973 TRPM4Q8TD43 1214 aa14.85□□□□□ -0.03
NEK3-204ENST00000552973 CCDC85AQ96PX6 553 aaPredicted RBP14.85□□□□□ -0.03
NEK3-204ENST00000552973 GLIS2Q9BZE0 524 aaPredicted RBP14.85□□□□□ -0.03
NEK3-204ENST00000552973 POLLQ9UGP5 575 aa14.85□□□□□ -0.03
NEK3-204ENST00000552973 CNOT7Q9UIV1 285 aaKnown RBP14.85□□□□□ -0.03
NEK3-204ENST00000552973 LBX1P52954 281 aa14.84□□□□□ -0.03
NEK3-204ENST00000552973 CALD1Q05682 793 aaKnown RBP14.84□□□□□ -0.03
NEK3-204ENST00000552973 ZBTB38Q8NAP3 1195 aaPredicted RBP14.84□□□□□ -0.03
NEK3-204ENST00000552973 SEC31BQ9NQW1 1179 aa14.84□□□□□ -0.03
NEK3-204ENST00000552973 KCNQ5Q9NR82 932 aa14.84□□□□□ -0.03
NEK3-204ENST00000552973 CELF2O95319 508 aaKnown RBP14.83□□□□□ -0.04
NEK3-204ENST00000552973 RPS8P62241 208 aaKnown RBP14.83□□□□□ -0.04
NEK3-204ENST00000552973 TSPYL6Q8N831 410 aa14.83□□□□□ -0.04
NEK3-204ENST00000552973 CAPNS2Q96L46 248 aa14.83□□□□□ -0.04
NEK3-204ENST00000552973 ZNF408Q9H9D4 720 aa14.83□□□□□ -0.04
NEK3-204ENST00000552973 H7C1D1 291 aa14.82□□□□□ -0.04
NEK3-204ENST00000552973 PSMD14O00487 310 aa14.82□□□□□ -0.04
NEK3-204ENST00000552973 RBM26Q5T8P6 1007 aaKnown RBP14.82□□□□□ -0.04
NEK3-204ENST00000552973 DLK2Q6UY11 383 aa14.82□□□□□ -0.04
NEK3-204ENST00000552973 SAMD7Q7Z3H4 446 aa14.82□□□□□ -0.04
NEK3-204ENST00000552973 MICALL2Q8IY33 904 aa14.82□□□□□ -0.04
NEK3-204ENST00000552973 TBC1D16Q8TBP0 767 aa14.82□□□□□ -0.04
NEK3-204ENST00000552973 TSR2Q969E8 191 aaKnown RBP14.82□□□□□ -0.04
NEK3-204ENST00000552973 PRDM10Q9NQV6 1147 aa14.82□□□□□ -0.04
NEK3-204ENST00000552973 ECE2O60344 883 aa14.81□□□□□ -0.04
NEK3-204ENST00000552973 MAP2K1Q02750 393 aaPredicted RBP14.81□□□□□ -0.04
NEK3-204ENST00000552973 CCDC30Q5VVM6 783 aa14.81□□□□□ -0.04
NEK3-204ENST00000552973 PGAP2Q9UHJ9 254 aa14.81□□□□□ -0.04
NEK3-204ENST00000552973 TLL2Q9Y6L7 1015 aa14.81□□□□□ -0.04
NEK3-204ENST00000552973 AOC2O75106 756 aa14.8□□□□□ -0.04
NEK3-204ENST00000552973 PCCAP05165 728 aaPredicted RBP14.8□□□□□ -0.04
NEK3-204ENST00000552973 HSPA8P11142 646 aaKnown RBP14.8□□□□□ -0.04
NEK3-204ENST00000552973 ECE1P42892 770 aa14.8□□□□□ -0.04
NEK3-204ENST00000552973 TBC1D10BQ4KMP7 808 aaPredicted RBP14.8□□□□□ -0.04
NEK3-204ENST00000552973 CDC37L1Q7L3B6 337 aa14.8□□□□□ -0.04
NEK3-204ENST00000552973 USP48Q86UV5 1035 aa14.8□□□□□ -0.04
NEK3-204ENST00000552973 CCDC191Q8NCU4 936 aa14.8□□□□□ -0.04
NEK3-204ENST00000552973 EYA3Q99504 573 aa14.8□□□□□ -0.04
NEK3-204ENST00000552973 METTL22Q9BUU2 404 aaPredicted RBP14.8□□□□□ -0.04
NEK3-204ENST00000552973 ZC3H12CQ9C0D7 883 aaKnown RBP14.8□□□□□ -0.04
NEK3-204ENST00000552973 CWC25Q9NXE8 425 aaPredicted RBP14.8□□□□□ -0.04
NEK3-204ENST00000552973 MAP3K2Q9Y2U5 619 aa14.8□□□□□ -0.04
NEK3-204ENST00000552973 DUOX1Q9NRD9 1551 aa14.8□□□□□ -0.04
NEK3-204ENST00000552973 COL4A1P02462 1669 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms