RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 CDHR2Q9BYE9 1310 aa13.92□□□□□ -0.18
CACNB3-224ENST00000552812 SMARCA5O60264 1052 aaPredicted RBP13.92□□□□□ -0.18
CACNB3-224ENST00000552812 CAMTA2O94983 1202 aa13.92□□□□□ -0.18
CACNB3-224ENST00000552812 HMGB2P26583 209 aaKnown RBP13.92□□□□□ -0.18
CACNB3-224ENST00000552812 ZNF34Q8IZ26 560 aa13.92□□□□□ -0.18
CACNB3-224ENST00000552812 RHPN1Q8TCX5 695 aa13.92□□□□□ -0.18
CACNB3-224ENST00000552812 PLA2G12BQ9BX93 195 aa13.92□□□□□ -0.18
CACNB3-224ENST00000552812 RPS6KA4O75676 772 aa13.91□□□□□ -0.18
CACNB3-224ENST00000552812 FOXO4P98177 505 aa13.91□□□□□ -0.18
CACNB3-224ENST00000552812 CLEC4GQ6UXB4 293 aa13.91□□□□□ -0.18
CACNB3-224ENST00000552812 OSBPL3Q9H4L5 887 aa13.91□□□□□ -0.18
CACNB3-224ENST00000552812 COPRSQ9NQ92 184 aa13.91□□□□□ -0.18
CACNB3-224ENST00000552812 ZNF652Q9Y2D9 606 aa13.91□□□□□ -0.18
CACNB3-224ENST00000552812 SALL3Q9BXA9 1300 aa13.9□□□□□ -0.18
CACNB3-224ENST00000552812 C4BP0C0L5 1744 aa13.9□□□□□ -0.18
CACNB3-224ENST00000552812 C16orf71Q8IYS4 520 aaPredicted RBP13.9□□□□□ -0.18
CACNB3-224ENST00000552812 JARID2Q92833 1246 aaPredicted RBP13.9□□□□□ -0.18
CACNB3-224ENST00000552812 SCN7AQ01118 1682 aa13.9□□□□□ -0.18
CACNB3-224ENST00000552812 GPTP24298 496 aa13.9□□□□□ -0.18
CACNB3-224ENST00000552812 RFX5P48382 616 aaPredicted RBP13.9□□□□□ -0.18
CACNB3-224ENST00000552812 KCNQ4P56696 695 aa13.9□□□□□ -0.18
CACNB3-224ENST00000552812 OS9Q13438 667 aaPredicted RBP13.9□□□□□ -0.18
CACNB3-224ENST00000552812 PARP10Q53GL7 1025 aa13.9□□□□□ -0.18
CACNB3-224ENST00000552812 SLC27A3Q5K4L6 730 aa13.9□□□□□ -0.18
CACNB3-224ENST00000552812 LMBR1LQ6UX01 489 aa13.9□□□□□ -0.18
CACNB3-224ENST00000552812 PCDHB13Q9Y5F0 798 aa13.9□□□□□ -0.18
CACNB3-224ENST00000552812 UBN2Q6ZU65 1347 aa13.89□□□□□ -0.19
CACNB3-224ENST00000552812 TRIM37O94972 964 aa13.89□□□□□ -0.19
CACNB3-224ENST00000552812 G3BP1Q13283 466 aaKnown RBP eCLIP13.89□□□□□ -0.19
CACNB3-224ENST00000552812 TTC22Q5TAA0 569 aa13.89□□□□□ -0.19
CACNB3-224ENST00000552812 PA2G4Q9UQ80 394 aaKnown RBP13.89□□□□□ -0.19
CACNB3-224ENST00000552812 AOX1Q06278 1338 aa13.88□□□□□ -0.19
CACNB3-224ENST00000552812 MX1P20591 662 aa13.88□□□□□ -0.19
CACNB3-224ENST00000552812 PDE1AP54750 535 aa13.88□□□□□ -0.19
CACNB3-224ENST00000552812 RTL5Q5HYW3 569 aaPredicted RBP13.88□□□□□ -0.19
CACNB3-224ENST00000552812 OTUD7AQ8TE49 926 aaPredicted RBP13.88□□□□□ -0.19
CACNB3-224ENST00000552812 FAM89AQ96GI7 184 aa13.88□□□□□ -0.19
CACNB3-224ENST00000552812 AK7Q96M32 723 aa13.88□□□□□ -0.19
CACNB3-224ENST00000552812 RGS17Q9UGC6 210 aaPredicted RBP13.88□□□□□ -0.19
CACNB3-224ENST00000552812 STAP2Q9UGK3 403 aa13.88□□□□□ -0.19
CACNB3-224ENST00000552812 RTCBQ9Y3I0 505 aaKnown RBP13.88□□□□□ -0.19
CACNB3-224ENST00000552812 GNPATO15228 680 aa13.87□□□□□ -0.19
CACNB3-224ENST00000552812 NUBP1P53384 320 aa13.87□□□□□ -0.19
CACNB3-224ENST00000552812 PTPN12Q05209 780 aaKnown RBP13.87□□□□□ -0.19
CACNB3-224ENST00000552812 CLASRPQ8N2M8 674 aaKnown RBP13.87□□□□□ -0.19
CACNB3-224ENST00000552812 IL1RAPL2Q9NP60 686 aa13.87□□□□□ -0.19
CACNB3-224ENST00000552812 TRMT112Q9UI30 125 aaKnown RBP13.87□□□□□ -0.19
CACNB3-224ENST00000552812 NARFQ9UHQ1 456 aa13.87□□□□□ -0.19
CACNB3-224ENST00000552812 MYH3P11055 1940 aa13.86□□□□□ -0.19
CACNB3-224ENST00000552812 CSF1RP07333 972 aa13.86□□□□□ -0.19
CACNB3-224ENST00000552812 HSP90B1P14625 803 aaKnown RBP13.86□□□□□ -0.19
CACNB3-224ENST00000552812 GSPT1P15170 499 aaKnown RBP13.86□□□□□ -0.19
CACNB3-224ENST00000552812 UTP14AQ9BVJ6 771 aaKnown RBP13.86□□□□□ -0.19
CACNB3-224ENST00000552812 LRRC4BQ9NT99 713 aa13.86□□□□□ -0.19
CACNB3-224ENST00000552812 FBXO3Q9UK99 471 aa13.86□□□□□ -0.19
CACNB3-224ENST00000552812 SH3TC1Q8TE82 1336 aa13.85□□□□□ -0.19
CACNB3-224ENST00000552812 IRS4O14654 1257 aaPredicted RBP13.85□□□□□ -0.19
CACNB3-224ENST00000552812 SASH1O94885 1247 aa13.85□□□□□ -0.19
CACNB3-224ENST00000552812 NIP7Q9Y221 180 aaKnown RBP eCLIP13.85□□□□□ -0.19
CACNB3-224ENST00000552812 CHMP3Q9Y3E7 222 aa13.85□□□□□ -0.19
CACNB3-224ENST00000552812 USP42Q9H9J4 1324 aaKnown RBP13.85□□□□□ -0.19
CACNB3-224ENST00000552812 EP400Q96L91 3159 aa13.85□□□□□ -0.19
CACNB3-224ENST00000552812 PLSCR1O15162 318 aa13.84□□□□□ -0.19
CACNB3-224ENST00000552812 PDE8AO60658 829 aa13.84□□□□□ -0.19
CACNB3-224ENST00000552812 CTSWP56202 376 aa13.84□□□□□ -0.19
CACNB3-224ENST00000552812 SUSD4Q5VX71 490 aa13.84□□□□□ -0.19
CACNB3-224ENST00000552812 KLHDC4Q8TBB5 520 aa13.84□□□□□ -0.19
CACNB3-224ENST00000552812 BCL11AQ9H165 835 aa13.84□□□□□ -0.19
CACNB3-224ENST00000552812 SIL1Q9H173 461 aa13.84□□□□□ -0.19
CACNB3-224ENST00000552812 LAMB2P55268 1798 aa13.84□□□□□ -0.19
CACNB3-224ENST00000552812 C4AP0C0L4 1744 aa13.84□□□□□ -0.19
CACNB3-224ENST00000552812 ZPR1O75312 459 aa13.84□□□□□ -0.19
CACNB3-224ENST00000552812 CIAO1O76071 339 aa13.84□□□□□ -0.19
CACNB3-224ENST00000552812 CCDC57Q2TAC2 916 aa13.84□□□□□ -0.19
CACNB3-224ENST00000552812 POTEAQ6S8J7 498 aa13.84□□□□□ -0.19
CACNB3-224ENST00000552812 TUBGCP6Q96RT7 1819 aa13.83□□□□□ -0.19
CACNB3-224ENST00000552812 TTC41PQ6P2S7 1318 aa13.83□□□□□ -0.19
CACNB3-224ENST00000552812 UBR3Q6ZT12 1888 aa13.83□□□□□ -0.2
CACNB3-224ENST00000552812 EIF5BO60841 1220 aaKnown RBP13.83□□□□□ -0.2
CACNB3-224ENST00000552812 NTSR2O95665 410 aa13.83□□□□□ -0.2
CACNB3-224ENST00000552812 TRAPPC3LQ5T215 181 aa13.83□□□□□ -0.2
CACNB3-224ENST00000552812 TTLL11Q8NHH1 800 aa13.83□□□□□ -0.2
CACNB3-224ENST00000552812 GPATCH3Q96I76 525 aa13.83□□□□□ -0.2
CACNB3-224ENST00000552812 RGPD3A6NKT7 1758 aaPredicted RBP13.83□□□□□ -0.2
CACNB3-224ENST00000552812 RGPD4Q7Z3J3 1758 aa13.83□□□□□ -0.2
CACNB3-224ENST00000552812 CDC45O75419 566 aa13.82□□□□□ -0.2
CACNB3-224ENST00000552812 IFIT2P09913 472 aaKnown RBP13.82□□□□□ -0.2
CACNB3-224ENST00000552812 IL15P40933 162 aaPredicted RBP13.82□□□□□ -0.2
CACNB3-224ENST00000552812 IFIT5Q13325 482 aaKnown RBP13.82□□□□□ -0.2
CACNB3-224ENST00000552812 TXNRD1Q16881 649 aa13.82□□□□□ -0.2
CACNB3-224ENST00000552812 COL24A1Q17RW2 1714 aa13.82□□□□□ -0.2
CACNB3-224ENST00000552812 USPL1Q5W0Q7 1092 aa13.82□□□□□ -0.2
CACNB3-224ENST00000552812 NUTM1Q86Y26 1132 aa13.82□□□□□ -0.2
CACNB3-224ENST00000552812 SYNE4Q8N205 404 aa13.82□□□□□ -0.2
CACNB3-224ENST00000552812 ARHGEF1Q92888 912 aaKnown RBP13.82□□□□□ -0.2
CACNB3-224ENST00000552812 UPF2Q9HAU5 1272 aaKnown RBP13.82□□□□□ -0.2
CACNB3-224ENST00000552812 BCL2L12Q9HB09 334 aa13.82□□□□□ -0.2
CACNB3-224ENST00000552812 EYA2O00167 538 aa13.81□□□□□ -0.2
CACNB3-224ENST00000552812 PLCG2P16885 1265 aa13.81□□□□□ -0.2
CACNB3-224ENST00000552812 SDSP20132 328 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms