RNA–Protein interactions for RNA: ENST00000552483.5

CNOT2-239, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-239ENST00000552483 ALDH1B1P30837 517 aa13.82□□□□□ -0.2
CNOT2-239ENST00000552483 CELF1Q92879 486 aaKnown RBP13.82□□□□□ -0.2
CNOT2-239ENST00000552483 SEC31BQ9NQW1 1179 aa13.82□□□□□ -0.2
CNOT2-239ENST00000552483 NOB1Q9ULX3 412 aaKnown RBP13.82□□□□□ -0.2
CNOT2-239ENST00000552483 DUOX1Q9NRD9 1551 aa13.82□□□□□ -0.2
CNOT2-239ENST00000552483 PTPRCP08575 1304 aa13.82□□□□□ -0.2
CNOT2-239ENST00000552483 COL4A5P29400 1685 aa13.82□□□□□ -0.2
CNOT2-239ENST00000552483 PPEF1O14829 653 aaPredicted RBP13.81□□□□□ -0.2
CNOT2-239ENST00000552483 BRPF1P55201 1214 aaPredicted RBP13.81□□□□□ -0.2
CNOT2-239ENST00000552483 GRAPQ13588 217 aa13.81□□□□□ -0.2
CNOT2-239ENST00000552483 C9orf131Q5VYM1 1079 aa13.81□□□□□ -0.2
CNOT2-239ENST00000552483 GRAPLQ8TC17 118 aaPredicted RBP13.81□□□□□ -0.2
CNOT2-239ENST00000552483 CCDC93Q567U6 631 aa13.8□□□□□ -0.2
CNOT2-239ENST00000552483 EPHA10Q5JZY3 1008 aa13.8□□□□□ -0.2
CNOT2-239ENST00000552483 DDX46Q7L014 1031 aaKnown RBP13.8□□□□□ -0.2
CNOT2-239ENST00000552483 SRCIN1Q9C0H9 1055 aa13.8□□□□□ -0.2
CNOT2-239ENST00000552483 A0A1B0GUL6 1792 aa13.8□□□□□ -0.2
CNOT2-239ENST00000552483 ALDH1L1O75891 902 aa13.79□□□□□ -0.2
CNOT2-239ENST00000552483 CTSWP56202 376 aa13.79□□□□□ -0.2
CNOT2-239ENST00000552483 TTLL11Q8NHH1 800 aa13.79□□□□□ -0.2
CNOT2-239ENST00000552483 PLA2G12BQ9BX93 195 aa13.79□□□□□ -0.2
CNOT2-239ENST00000552483 RNF181Q9P0P0 153 aa13.79□□□□□ -0.2
CNOT2-239ENST00000552483 LTBP3Q9NS15 1303 aa13.79□□□□□ -0.2
CNOT2-239ENST00000552483 GRM8O00222 908 aa13.78□□□□□ -0.2
CNOT2-239ENST00000552483 ZNF784Q8NCA9 323 aaPredicted RBP13.78□□□□□ -0.2
CNOT2-239ENST00000552483 KAZALD1Q96I82 304 aa13.78□□□□□ -0.2
CNOT2-239ENST00000552483 TAOK3Q9H2K8 898 aa13.78□□□□□ -0.2
CNOT2-239ENST00000552483 GREM2Q9H772 168 aa13.78□□□□□ -0.2
CNOT2-239ENST00000552483 ATP6V0A2Q9Y487 856 aa13.78□□□□□ -0.2
CNOT2-239ENST00000552483 NBPF7P0C2Y1 421 aaPredicted RBP13.77□□□□□ -0.21
CNOT2-239ENST00000552483 FOXO4P98177 505 aa13.77□□□□□ -0.21
CNOT2-239ENST00000552483 FKBP4Q02790 459 aaKnown RBP eCLIP13.77□□□□□ -0.21
CNOT2-239ENST00000552483 GOLGB1Q14789 3259 aaKnown RBP13.77□□□□□ -0.21
CNOT2-239ENST00000552483 SOGA3Q5TF21 947 aa13.77□□□□□ -0.21
CNOT2-239ENST00000552483 SUCLG2Q96I99 432 aa13.77□□□□□ -0.21
CNOT2-239ENST00000552483 RTL9Q8NET4 1388 aa13.76□□□□□ -0.21
CNOT2-239ENST00000552483 UTYO14607 1347 aa13.76□□□□□ -0.21
CNOT2-239ENST00000552483 KIF16BQ96L93 1317 aa13.76□□□□□ -0.21
CNOT2-239ENST00000552483 BBOX1O75936 387 aa13.76□□□□□ -0.21
CNOT2-239ENST00000552483 CSF1RP07333 972 aa13.76□□□□□ -0.21
CNOT2-239ENST00000552483 LMNB1P20700 586 aa13.76□□□□□ -0.21
CNOT2-239ENST00000552483 FAM161AQ3B820 660 aa13.76□□□□□ -0.21
CNOT2-239ENST00000552483 CCDC152Q4G0S7 254 aa13.76□□□□□ -0.21
CNOT2-239ENST00000552483 SP8Q8IXZ3 490 aa13.76□□□□□ -0.21
CNOT2-239ENST00000552483 ZNF277Q9NRM2 450 aaPredicted RBP13.76□□□□□ -0.21
CNOT2-239ENST00000552483 UTRNP46939 3433 aa13.76□□□□□ -0.21
CNOT2-239ENST00000552483 TRIM27P14373 513 aa13.75□□□□□ -0.21
CNOT2-239ENST00000552483 RPS8P62241 208 aaKnown RBP13.75□□□□□ -0.21
CNOT2-239ENST00000552483 ZNF526Q8TF50 670 aaPredicted RBP13.75□□□□□ -0.21
CNOT2-239ENST00000552483 YTHDC1Q96MU7 727 aaKnown RBP13.75□□□□□ -0.21
CNOT2-239ENST00000552483 API5Q9BZZ5 524 aaKnown RBP13.75□□□□□ -0.21
CNOT2-239ENST00000552483 USP44Q9H0E7 712 aa13.75□□□□□ -0.21
CNOT2-239ENST00000552483 C9orf78Q9NZ63 289 aaPredicted RBP13.75□□□□□ -0.21
CNOT2-239ENST00000552483 CC2D2BQ6DHV5 1058 aa13.74□□□□□ -0.21
CNOT2-239ENST00000552483 RTKN2Q8IZC4 609 aa13.74□□□□□ -0.21
CNOT2-239ENST00000552483 ARHGAP45Q92619 1136 aa13.74□□□□□ -0.21
CNOT2-239ENST00000552483 FRAT1Q92837 279 aaPredicted RBP13.74□□□□□ -0.21
CNOT2-239ENST00000552483 PSMD1Q99460 953 aa13.74□□□□□ -0.21
CNOT2-239ENST00000552483 HSP90B1P14625 803 aaKnown RBP13.73□□□□□ -0.21
CNOT2-239ENST00000552483 ITGA6P23229 1130 aa13.73□□□□□ -0.21
CNOT2-239ENST00000552483 IARSP41252 1262 aaKnown RBP13.73□□□□□ -0.21
CNOT2-239ENST00000552483 GPSM2P81274 684 aa13.73□□□□□ -0.21
CNOT2-239ENST00000552483 LMBR1LQ6UX01 489 aa13.73□□□□□ -0.21
CNOT2-239ENST00000552483 ANKRD44Q8N8A2 993 aa13.73□□□□□ -0.21
CNOT2-239ENST00000552483 CLUAP1Q96AJ1 413 aa13.73□□□□□ -0.21
CNOT2-239ENST00000552483 GPR101Q96P66 508 aaPredicted RBP13.73□□□□□ -0.21
CNOT2-239ENST00000552483 CCT4P50991 539 aaKnown RBP13.72□□□□□ -0.21
CNOT2-239ENST00000552483 ATF7IPQ6VMQ6 1270 aa13.72□□□□□ -0.21
CNOT2-239ENST00000552483 ANKRD18AQ8IVF6 992 aa13.72□□□□□ -0.21
CNOT2-239ENST00000552483 MPNDQ8N594 471 aa13.72□□□□□ -0.21
CNOT2-239ENST00000552483 RTFDC1Q9BY42 306 aaPredicted RBP13.72□□□□□ -0.21
CNOT2-239ENST00000552483 BICC1Q9H694 974 aaKnown RBP13.72□□□□□ -0.21
CNOT2-239ENST00000552483 ZNF541Q9H0D2 1346 aa13.71□□□□□ -0.21
CNOT2-239ENST00000552483 WTIPA6NIX2 430 aaPredicted RBP13.71□□□□□ -0.21
CNOT2-239ENST00000552483 RLBP1P12271 317 aa13.71□□□□□ -0.21
CNOT2-239ENST00000552483 ZKSCAN2Q63HK3 967 aa13.71□□□□□ -0.21
CNOT2-239ENST00000552483 INTS3Q68E01 1043 aaKnown RBP13.71□□□□□ -0.21
CNOT2-239ENST00000552483 DPP8Q6V1X1 898 aaPredicted RBP13.71□□□□□ -0.21
CNOT2-239ENST00000552483 TMC4Q7Z404 712 aa13.71□□□□□ -0.21
CNOT2-239ENST00000552483 ZNF594Q96JF6 807 aaPredicted RBP13.71□□□□□ -0.21
CNOT2-239ENST00000552483 MEIS3Q99687 375 aa13.71□□□□□ -0.21
CNOT2-239ENST00000552483 POLLQ9UGP5 575 aa13.71□□□□□ -0.21
CNOT2-239ENST00000552483 CHMP3Q9Y3E7 222 aa13.71□□□□□ -0.21
CNOT2-239ENST00000552483 SCN9AQ15858 1988 aa13.71□□□□□ -0.22
CNOT2-239ENST00000552483 WDR90Q96KV7 1748 aa13.7□□□□□ -0.22
CNOT2-239ENST00000552483 ZNF646O15015 1829 aaPredicted RBP13.7□□□□□ -0.22
CNOT2-239ENST00000552483 AOC3Q16853 763 aa13.7□□□□□ -0.22
CNOT2-239ENST00000552483 RABL6Q3YEC7 729 aaPredicted RBP13.7□□□□□ -0.22
CNOT2-239ENST00000552483 TMEM57Q8N5G2 664 aa13.7□□□□□ -0.22
CNOT2-239ENST00000552483 CDC5LQ99459 802 aaKnown RBP13.7□□□□□ -0.22
CNOT2-239ENST00000552483 NMRK2Q9NPI5 230 aa13.7□□□□□ -0.22
CNOT2-239ENST00000552483 NSFL1CQ9UNZ2 370 aaKnown RBP13.7□□□□□ -0.22
CNOT2-239ENST00000552483 ZC3H4Q9UPT8 1303 aaKnown RBP13.69□□□□□ -0.22
CNOT2-239ENST00000552483 ANKRD18BA2A2Z9 1011 aa13.69□□□□□ -0.22
CNOT2-239ENST00000552483 IPO8O15397 1037 aaKnown RBP13.69□□□□□ -0.22
CNOT2-239ENST00000552483 PPIP5K2O43314 1243 aa13.69□□□□□ -0.22
CNOT2-239ENST00000552483 BSDC1Q9NW68 430 aaPredicted RBP13.69□□□□□ -0.22
CNOT2-239ENST00000552483 MINPP1Q9UNW1 487 aa13.69□□□□□ -0.22
CNOT2-239ENST00000552483 FZD9O00144 591 aa13.68□□□□□ -0.22
CNOT2-239ENST00000552483 GRIPAP1Q4V328 841 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms