RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 ELOA3Q8NG57 546 aa11.38□□□□□ -0.59
CHPT1-209ENST00000552329 DNAJB12Q9NXW2 375 aaKnown RBP11.38□□□□□ -0.59
CHPT1-209ENST00000552329 CNTNAP5Q8WYK1 1306 aa11.37□□□□□ -0.59
CHPT1-209ENST00000552329 ICMTO60725 284 aa11.37□□□□□ -0.59
CHPT1-209ENST00000552329 FAM13AO94988 1023 aa11.37□□□□□ -0.59
CHPT1-209ENST00000552329 ALAS2P22557 587 aa11.37□□□□□ -0.59
CHPT1-209ENST00000552329 SF3B2Q13435 895 aaKnown RBP11.37□□□□□ -0.59
CHPT1-209ENST00000552329 CCER1Q8TC90 406 aaPredicted RBP11.37□□□□□ -0.59
CHPT1-209ENST00000552329 CCDC87Q9NVE4 849 aa11.37□□□□□ -0.59
CHPT1-209ENST00000552329 FAM13BQ9NYF5 915 aa11.37□□□□□ -0.59
CHPT1-209ENST00000552329 POLIQ9UNA4 740 aa11.37□□□□□ -0.59
CHPT1-209ENST00000552329 HFE2Q6ZVN8 426 aa11.36□□□□□ -0.59
CHPT1-209ENST00000552329 MMP20O60882 483 aa11.35□□□□□ -0.59
CHPT1-209ENST00000552329 PDGFAP04085 211 aa11.35□□□□□ -0.59
CHPT1-209ENST00000552329 DHX32Q7L7V1 743 aaKnown RBP11.35□□□□□ -0.59
CHPT1-209ENST00000552329 TNFRSF25Q93038 417 aa11.35□□□□□ -0.59
CHPT1-209ENST00000552329 GGNBP2Q9H3C7 697 aa11.35□□□□□ -0.59
CHPT1-209ENST00000552329 PDIA4P13667 645 aaKnown RBP11.34□□□□□ -0.59
CHPT1-209ENST00000552329 C8orf86Q6ZUL3 223 aa11.34□□□□□ -0.59
CHPT1-209ENST00000552329 TRAIPQ9BWF2 469 aa11.34□□□□□ -0.59
CHPT1-209ENST00000552329 LRRC4BQ9NT99 713 aa11.34□□□□□ -0.59
CHPT1-209ENST00000552329 EGFL7Q9UHF1 273 aa11.34□□□□□ -0.59
CHPT1-209ENST00000552329 SLC6A14Q9UN76 642 aa11.34□□□□□ -0.59
CHPT1-209ENST00000552329 IVNS1ABPQ9Y6Y0 642 aa11.34□□□□□ -0.59
CHPT1-209ENST00000552329 EGFRP00533 1210 aa11.33□□□□□ -0.6
CHPT1-209ENST00000552329 CPB1P15086 417 aa11.33□□□□□ -0.6
CHPT1-209ENST00000552329 ALKBH2Q6NS38 261 aa11.33□□□□□ -0.6
CHPT1-209ENST00000552329 NLRP13Q86W25 1043 aa11.33□□□□□ -0.6
CHPT1-209ENST00000552329 AEBP1Q8IUX7 1158 aa11.33□□□□□ -0.6
CHPT1-209ENST00000552329 NSUN5Q96P11 429 aaKnown RBP11.33□□□□□ -0.6
CHPT1-209ENST00000552329 FNDC3AQ9Y2H6 1198 aaKnown RBP11.33□□□□□ -0.6
CHPT1-209ENST00000552329 ADARB2-AS1A8MUL3 147 aa11.32□□□□□ -0.6
CHPT1-209ENST00000552329 ZBTB42B2RXF5 422 aa11.32□□□□□ -0.6
CHPT1-209ENST00000552329 FZD6O60353 706 aa11.32□□□□□ -0.6
CHPT1-209ENST00000552329 NPR3P17342 541 aa11.32□□□□□ -0.6
CHPT1-209ENST00000552329 MZF1P28698 734 aaPredicted RBP11.32□□□□□ -0.6
CHPT1-209ENST00000552329 ZNF438Q7Z4V0 828 aa11.32□□□□□ -0.6
CHPT1-209ENST00000552329 FAM35AQ86V20 835 aa11.32□□□□□ -0.6
CHPT1-209ENST00000552329 TTC16Q8NEE8 873 aa11.32□□□□□ -0.6
CHPT1-209ENST00000552329 NUDT8Q8WV74 236 aa11.32□□□□□ -0.6
CHPT1-209ENST00000552329 MDFIQ99750 246 aa11.32□□□□□ -0.6
CHPT1-209ENST00000552329 TMEM63CQ9P1W3 806 aa11.32□□□□□ -0.6
CHPT1-209ENST00000552329 BIN2Q9UBW5 565 aaPredicted RBP11.32□□□□□ -0.6
CHPT1-209ENST00000552329 NAGPAQ9UK23 515 aa11.32□□□□□ -0.6
CHPT1-209ENST00000552329 STARD13Q9Y3M8 1113 aa11.32□□□□□ -0.6
CHPT1-209ENST00000552329 MAP3K6O95382 1288 aa11.31□□□□□ -0.6
CHPT1-209ENST00000552329 PCSK2P16519 638 aa11.31□□□□□ -0.6
CHPT1-209ENST00000552329 ECM1Q16610 540 aa11.31□□□□□ -0.6
CHPT1-209ENST00000552329 J3QW42 95 aa11.3□□□□□ -0.6
CHPT1-209ENST00000552329 M0R082 166 aa11.3□□□□□ -0.6
CHPT1-209ENST00000552329 ALBP02768 609 aa11.3□□□□□ -0.6
CHPT1-209ENST00000552329 PSAPP07602 524 aa11.3□□□□□ -0.6
CHPT1-209ENST00000552329 IRS1P35568 1242 aa11.3□□□□□ -0.6
CHPT1-209ENST00000552329 TTC39BQ5VTQ0 682 aaPredicted RBP11.3□□□□□ -0.6
CHPT1-209ENST00000552329 PODNQ7Z5L7 613 aa11.3□□□□□ -0.6
CHPT1-209ENST00000552329 ZNF417Q8TAU3 575 aa11.3□□□□□ -0.6
CHPT1-209ENST00000552329 ZNF587Q96SQ5 575 aaPredicted RBP11.3□□□□□ -0.6
CHPT1-209ENST00000552329 ELP3Q9H9T3 547 aa11.3□□□□□ -0.6
CHPT1-209ENST00000552329 EFCC1Q9HA90 598 aa11.3□□□□□ -0.6
CHPT1-209ENST00000552329 TLR7Q9NYK1 1049 aaKnown RBP11.3□□□□□ -0.6
CHPT1-209ENST00000552329 SOWAHDA6NJG2 315 aa11.29□□□□□ -0.6
CHPT1-209ENST00000552329 CYP2E1P05181 493 aaPredicted RBP11.29□□□□□ -0.6
CHPT1-209ENST00000552329 HOXB4P17483 251 aaPredicted RBP11.29□□□□□ -0.6
CHPT1-209ENST00000552329 ARHGAP4P98171 946 aa11.29□□□□□ -0.6
CHPT1-209ENST00000552329 PSAPL1Q6NUJ1 521 aa11.28□□□□□ -0.6
CHPT1-209ENST00000552329 C11orf16Q9NQ32 467 aa11.28□□□□□ -0.6
CHPT1-209ENST00000552329 BRPF3Q9ULD4 1205 aa11.28□□□□□ -0.6
CHPT1-209ENST00000552329 DGKGP49619 791 aa11.27□□□□□ -0.61
CHPT1-209ENST00000552329 BEND7Q8N7W2 519 aaPredicted RBP11.27□□□□□ -0.61
CHPT1-209ENST00000552329 JPH1Q9HDC5 661 aaPredicted RBP11.27□□□□□ -0.61
CHPT1-209ENST00000552329 ABI2Q9NYB9 513 aaPredicted RBP11.27□□□□□ -0.61
CHPT1-209ENST00000552329 CNTN3Q9P232 1028 aa11.27□□□□□ -0.61
CHPT1-209ENST00000552329 KANSL3Q9P2N6 904 aa11.27□□□□□ -0.61
CHPT1-209ENST00000552329 GNEQ9Y223 722 aaKnown RBP11.27□□□□□ -0.61
CHPT1-209ENST00000552329 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.27□□□□□ -0.61
CHPT1-209ENST00000552329 EIF2AK2P19525 551 aaKnown RBP11.26□□□□□ -0.61
CHPT1-209ENST00000552329 PLAURQ03405 335 aa11.26□□□□□ -0.61
CHPT1-209ENST00000552329 COL13A1Q5TAT6 717 aaPredicted RBP11.26□□□□□ -0.61
CHPT1-209ENST00000552329 MICALL1Q8N3F8 863 aa11.26□□□□□ -0.61
CHPT1-209ENST00000552329 TRPM4Q8TD43 1214 aa11.26□□□□□ -0.61
CHPT1-209ENST00000552329 SCARF2Q96GP6 870 aaPredicted RBP11.26□□□□□ -0.61
CHPT1-209ENST00000552329 KCNA1Q09470 495 aa11.25□□□□□ -0.61
CHPT1-209ENST00000552329 PERM1Q5SV97 790 aa11.25□□□□□ -0.61
CHPT1-209ENST00000552329 LINC00114Q6XXX2 140 aa11.25□□□□□ -0.61
CHPT1-209ENST00000552329 TMC1Q8TDI8 760 aa11.25□□□□□ -0.61
CHPT1-209ENST00000552329 SUV39H2Q9H5I1 410 aa11.25□□□□□ -0.61
CHPT1-209ENST00000552329 MKL2Q9ULH7 1088 aa11.25□□□□□ -0.61
CHPT1-209ENST00000552329 GPLD1P80108 840 aa11.24□□□□□ -0.61
CHPT1-209ENST00000552329 PDE12Q6L8Q7 609 aaKnown RBP11.24□□□□□ -0.61
CHPT1-209ENST00000552329 ELMSAN1Q6PJG2 1045 aa11.24□□□□□ -0.61
CHPT1-209ENST00000552329 C1orf127Q8N9H9 656 aa11.24□□□□□ -0.61
CHPT1-209ENST00000552329 OR13H1Q8NG92 308 aa11.24□□□□□ -0.61
CHPT1-209ENST00000552329 FOXD3Q9UJU5 478 aaPredicted RBP11.24□□□□□ -0.61
CHPT1-209ENST00000552329 LOC102724428A0A0B4J2F2 783 aa11.23□□□□□ -0.61
CHPT1-209ENST00000552329 RGS9O75916 674 aaPredicted RBP11.23□□□□□ -0.61
CHPT1-209ENST00000552329 NRLP54845 237 aa11.23□□□□□ -0.61
CHPT1-209ENST00000552329 SIK1P57059 783 aa11.23□□□□□ -0.61
CHPT1-209ENST00000552329 SMG9Q9H0W8 520 aaKnown RBP11.23□□□□□ -0.61
CHPT1-209ENST00000552329 PHF20L1A8MW92 1017 aa11.22□□□□□ -0.61
CHPT1-209ENST00000552329 NDUFB5O43674 189 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms