RNA–Protein interactions for RNA: ENST00000552001.1

SLC4A8-216, Transcript of solute carrier family 4 member 8, humanhuman

TSL 3

Gene SLC4A8, Length 585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A8-216ENST00000552001 RTL5Q5HYW3 569 aaPredicted RBP17.76■□□□□ 0.43
SLC4A8-216ENST00000552001 DDX46Q7L014 1031 aaKnown RBP17.76■□□□□ 0.43
SLC4A8-216ENST00000552001 BCL2L13Q9BXK5 485 aa17.76■□□□□ 0.43
SLC4A8-216ENST00000552001 RTL9Q8NET4 1388 aa17.76■□□□□ 0.43
SLC4A8-216ENST00000552001 WDR90Q96KV7 1748 aa17.75■□□□□ 0.43
SLC4A8-216ENST00000552001 KIF16BQ96L93 1317 aa17.75■□□□□ 0.43
SLC4A8-216ENST00000552001 PPEF1O14829 653 aaPredicted RBP17.75■□□□□ 0.43
SLC4A8-216ENST00000552001 ALDH1L1O75891 902 aa17.75■□□□□ 0.43
SLC4A8-216ENST00000552001 CASP7P55210 303 aa17.75■□□□□ 0.43
SLC4A8-216ENST00000552001 RASSF7Q02833 373 aa17.75■□□□□ 0.43
SLC4A8-216ENST00000552001 TMC4Q7Z404 712 aa17.75■□□□□ 0.43
SLC4A8-216ENST00000552001 PLA2G12BQ9BX93 195 aa17.75■□□□□ 0.43
SLC4A8-216ENST00000552001 ZNF646O15015 1829 aaPredicted RBP17.75■□□□□ 0.43
SLC4A8-216ENST00000552001 MYH13Q9UKX3 1938 aa17.74■□□□□ 0.43
SLC4A8-216ENST00000552001 BBOX1O75936 387 aa17.74■□□□□ 0.43
SLC4A8-216ENST00000552001 LMNB1P20700 586 aa17.74■□□□□ 0.43
SLC4A8-216ENST00000552001 GRAPQ13588 217 aa17.74■□□□□ 0.43
SLC4A8-216ENST00000552001 UBE3BQ7Z3V4 1068 aa17.74■□□□□ 0.43
SLC4A8-216ENST00000552001 RTKN2Q8IZC4 609 aa17.74■□□□□ 0.43
SLC4A8-216ENST00000552001 GRAPLQ8TC17 118 aaPredicted RBP17.74■□□□□ 0.43
SLC4A8-216ENST00000552001 SRCIN1Q9C0H9 1055 aa17.74■□□□□ 0.43
SLC4A8-216ENST00000552001 TAOK3Q9H2K8 898 aa17.74■□□□□ 0.43
SLC4A8-216ENST00000552001 CTSWP56202 376 aa17.73■□□□□ 0.43
SLC4A8-216ENST00000552001 CCDC152Q4G0S7 254 aa17.73■□□□□ 0.43
SLC4A8-216ENST00000552001 ZNF219Q9P2Y4 722 aaPredicted RBP17.73■□□□□ 0.43
SLC4A8-216ENST00000552001 ATP6V0A2Q9Y487 856 aa17.73■□□□□ 0.43
SLC4A8-216ENST00000552001 PRELPP51888 382 aa17.72■□□□□ 0.43
SLC4A8-216ENST00000552001 FKBP4Q02790 459 aaKnown RBP eCLIP17.72■□□□□ 0.43
SLC4A8-216ENST00000552001 C9orf131Q5VYM1 1079 aa17.72■□□□□ 0.43
SLC4A8-216ENST00000552001 SLC4A10Q6U841 1118 aa17.72■□□□□ 0.43
SLC4A8-216ENST00000552001 PSMD1Q99460 953 aa17.72■□□□□ 0.43
SLC4A8-216ENST00000552001 SCN9AQ15858 1988 aa17.71■□□□□ 0.43
SLC4A8-216ENST00000552001 GRM8O00222 908 aa17.71■□□□□ 0.43
SLC4A8-216ENST00000552001 ARHGAP45Q92619 1136 aa17.71■□□□□ 0.43
SLC4A8-216ENST00000552001 JARID2Q92833 1246 aaPredicted RBP17.71■□□□□ 0.43
SLC4A8-216ENST00000552001 RNF181Q9P0P0 153 aa17.71■□□□□ 0.43
SLC4A8-216ENST00000552001 UTYO14607 1347 aa17.71■□□□□ 0.42
SLC4A8-216ENST00000552001 OLFM4Q6UX06 510 aa17.7■□□□□ 0.42
SLC4A8-216ENST00000552001 SP8Q8IXZ3 490 aa17.7■□□□□ 0.42
SLC4A8-216ENST00000552001 ZNF784Q8NCA9 323 aaPredicted RBP17.7■□□□□ 0.42
SLC4A8-216ENST00000552001 TTLL11Q8NHH1 800 aa17.7■□□□□ 0.42
SLC4A8-216ENST00000552001 COL4A5P29400 1685 aa17.7■□□□□ 0.42
SLC4A8-216ENST00000552001 CELF1Q92879 486 aaKnown RBP17.69■□□□□ 0.42
SLC4A8-216ENST00000552001 API5Q9BZZ5 524 aaKnown RBP17.69■□□□□ 0.42
SLC4A8-216ENST00000552001 TMX4Q9H1E5 349 aaPredicted RBP17.69■□□□□ 0.42
SLC4A8-216ENST00000552001 NOB1Q9ULX3 412 aaKnown RBP17.69■□□□□ 0.42
SLC4A8-216ENST00000552001 CSF1RP07333 972 aa17.68■□□□□ 0.42
SLC4A8-216ENST00000552001 C9orf78Q9NZ63 289 aaPredicted RBP17.68■□□□□ 0.42
SLC4A8-216ENST00000552001 CCT4P50991 539 aaKnown RBP17.67■□□□□ 0.42
SLC4A8-216ENST00000552001 RPS8P62241 208 aaKnown RBP17.67■□□□□ 0.42
SLC4A8-216ENST00000552001 SEC31BQ9NQW1 1179 aa17.67■□□□□ 0.42
SLC4A8-216ENST00000552001 IPO8O15397 1037 aaKnown RBP17.66■□□□□ 0.42
SLC4A8-216ENST00000552001 FOXO4P98177 505 aa17.66■□□□□ 0.42
SLC4A8-216ENST00000552001 CDC5LQ99459 802 aaKnown RBP17.66■□□□□ 0.42
SLC4A8-216ENST00000552001 RTFDC1Q9BY42 306 aaPredicted RBP17.66■□□□□ 0.42
SLC4A8-216ENST00000552001 VPS33BQ9H267 617 aa17.66■□□□□ 0.42
SLC4A8-216ENST00000552001 GREM2Q9H772 168 aa17.66■□□□□ 0.42
SLC4A8-216ENST00000552001 BCAR3O75815 825 aa17.65■□□□□ 0.42
SLC4A8-216ENST00000552001 IARSP41252 1262 aaKnown RBP17.65■□□□□ 0.42
SLC4A8-216ENST00000552001 SLC51AQ86UW1 340 aa17.65■□□□□ 0.42
SLC4A8-216ENST00000552001 ARAP2Q8WZ64 1704 aa17.64■□□□□ 0.41
SLC4A8-216ENST00000552001 ATF7IPQ6VMQ6 1270 aa17.64■□□□□ 0.41
SLC4A8-216ENST00000552001 ANKRD18AQ8IVF6 992 aa17.64■□□□□ 0.41
SLC4A8-216ENST00000552001 SUPT20HQ8NEM7 779 aa17.64■□□□□ 0.41
SLC4A8-216ENST00000552001 ZNF277Q9NRM2 450 aaPredicted RBP17.64■□□□□ 0.41
SLC4A8-216ENST00000552001 NBPF7P0C2Y1 421 aaPredicted RBP17.63■□□□□ 0.41
SLC4A8-216ENST00000552001 TRIM27P14373 513 aa17.63■□□□□ 0.41
SLC4A8-216ENST00000552001 FAM161AQ3B820 660 aa17.63■□□□□ 0.41
SLC4A8-216ENST00000552001 INTS3Q68E01 1043 aaKnown RBP17.63■□□□□ 0.41
SLC4A8-216ENST00000552001 DPP8Q6V1X1 898 aaPredicted RBP17.63■□□□□ 0.41
SLC4A8-216ENST00000552001 MPNDQ8N594 471 aa17.63■□□□□ 0.41
SLC4A8-216ENST00000552001 CCDC85AQ96PX6 553 aaPredicted RBP17.63■□□□□ 0.41
SLC4A8-216ENST00000552001 USP44Q9H0E7 712 aa17.63■□□□□ 0.41
SLC4A8-216ENST00000552001 PODXL2Q9NZ53 605 aa17.63■□□□□ 0.41
SLC4A8-216ENST00000552001 ITGA6P23229 1130 aa17.62■□□□□ 0.41
SLC4A8-216ENST00000552001 KAZALD1Q96I82 304 aa17.62■□□□□ 0.41
SLC4A8-216ENST00000552001 BSDC1Q9NW68 430 aaPredicted RBP17.62■□□□□ 0.41
SLC4A8-216ENST00000552001 ECM29Q5VYK3 1845 aa17.62■□□□□ 0.41
SLC4A8-216ENST00000552001 KDM2BQ8NHM5 1336 aa17.62■□□□□ 0.41
SLC4A8-216ENST00000552001 ADAMTSL1Q8N6G6 1762 aa17.61■□□□□ 0.41
SLC4A8-216ENST00000552001 RABL6Q3YEC7 729 aaPredicted RBP17.61■□□□□ 0.41
SLC4A8-216ENST00000552001 EPHA10Q5JZY3 1008 aa17.61■□□□□ 0.41
SLC4A8-216ENST00000552001 ZKSCAN2Q63HK3 967 aa17.61■□□□□ 0.41
SLC4A8-216ENST00000552001 SUCLG2Q96I99 432 aa17.61■□□□□ 0.41
SLC4A8-216ENST00000552001 GPBP1L1Q9HC44 474 aaPredicted RBP17.61■□□□□ 0.41
SLC4A8-216ENST00000552001 POLR2AP24928 1970 aaKnown RBP17.6■□□□□ 0.41
SLC4A8-216ENST00000552001 ANKRD18BA2A2Z9 1011 aa17.6■□□□□ 0.41
SLC4A8-216ENST00000552001 GLTPD2A6NH11 291 aa17.6■□□□□ 0.41
SLC4A8-216ENST00000552001 LMBR1LQ6UX01 489 aa17.6■□□□□ 0.41
SLC4A8-216ENST00000552001 FRAT1Q92837 279 aaPredicted RBP17.6■□□□□ 0.41
SLC4A8-216ENST00000552001 XDHP47989 1333 aa17.59■□□□□ 0.41
SLC4A8-216ENST00000552001 FZD9O00144 591 aa17.59■□□□□ 0.41
SLC4A8-216ENST00000552001 IGHMBP2P38935 993 aaKnown RBP17.59■□□□□ 0.41
SLC4A8-216ENST00000552001 KIAA2012Q0VF49 1180 aa17.59■□□□□ 0.41
SLC4A8-216ENST00000552001 IFIT5Q13325 482 aaKnown RBP17.59■□□□□ 0.41
SLC4A8-216ENST00000552001 BICC1Q9H694 974 aaKnown RBP17.59■□□□□ 0.41
SLC4A8-216ENST00000552001 PPIP5K2O43314 1243 aa17.58■□□□□ 0.4
SLC4A8-216ENST00000552001 GPSM2P81274 684 aa17.58■□□□□ 0.4
SLC4A8-216ENST00000552001 LARGE2Q8N3Y3 721 aa17.58■□□□□ 0.4
SLC4A8-216ENST00000552001 JDP2Q8WYK2 163 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms