RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 HLFQ16534 295 aa9.78□□□□□ -0.84
RAB3IP-215ENST00000551641 TXNRD1Q16881 649 aa9.78□□□□□ -0.84
RAB3IP-215ENST00000551641 KIF6Q6ZMV9 814 aa9.78□□□□□ -0.84
RAB3IP-215ENST00000551641 DZIP3Q86Y13 1208 aaKnown RBP9.78□□□□□ -0.84
RAB3IP-215ENST00000551641 TRIM44Q96DX7 344 aaPredicted RBP9.78□□□□□ -0.84
RAB3IP-215ENST00000551641 AK7Q96M32 723 aa9.78□□□□□ -0.84
RAB3IP-215ENST00000551641 RNF39Q9H2S5 420 aa9.78□□□□□ -0.84
RAB3IP-215ENST00000551641 SRP68Q9UHB9 627 aaKnown RBP9.78□□□□□ -0.84
RAB3IP-215ENST00000551641 KCPQ6ZWJ8 1503 aa9.77□□□□□ -0.84
RAB3IP-215ENST00000551641 MBD3O95983 291 aa9.77□□□□□ -0.85
RAB3IP-215ENST00000551641 LSG1Q9H089 658 aaKnown RBP9.77□□□□□ -0.85
RAB3IP-215ENST00000551641 C9orf78Q9NZ63 289 aaPredicted RBP9.77□□□□□ -0.85
RAB3IP-215ENST00000551641 C5P01031 1676 aa9.77□□□□□ -0.85
RAB3IP-215ENST00000551641 SIPA1L3O60292 1781 aaPredicted RBP9.77□□□□□ -0.85
RAB3IP-215ENST00000551641 INTS5Q6P9B9 1019 aaKnown RBP9.77□□□□□ -0.85
RAB3IP-215ENST00000551641 KSR2Q6VAB6 950 aa9.77□□□□□ -0.85
RAB3IP-215ENST00000551641 CNTROBQ8N137 903 aa9.77□□□□□ -0.85
RAB3IP-215ENST00000551641 TTC14Q96N46 770 aa9.77□□□□□ -0.85
RAB3IP-215ENST00000551641 TEX13AQ9BXU3 409 aaPredicted RBP9.77□□□□□ -0.85
RAB3IP-215ENST00000551641 NEXNQ0ZGT2 675 aa9.76□□□□□ -0.85
RAB3IP-215ENST00000551641 PDLIM2Q96JY6 352 aa9.76□□□□□ -0.85
RAB3IP-215ENST00000551641 TMEM63CQ9P1W3 806 aa9.76□□□□□ -0.85
RAB3IP-215ENST00000551641 CHMP3Q9Y3E7 222 aa9.76□□□□□ -0.85
RAB3IP-215ENST00000551641 UTYO14607 1347 aa9.76□□□□□ -0.85
RAB3IP-215ENST00000551641 NPHP1O15259 732 aa9.76□□□□□ -0.85
RAB3IP-215ENST00000551641 GLRX3O76003 335 aaKnown RBP9.76□□□□□ -0.85
RAB3IP-215ENST00000551641 HS1BP3Q53T59 392 aa9.76□□□□□ -0.85
RAB3IP-215ENST00000551641 LRSAM1Q6UWE0 723 aa9.76□□□□□ -0.85
RAB3IP-215ENST00000551641 PROM2Q8N271 834 aa9.76□□□□□ -0.85
RAB3IP-215ENST00000551641 RBSNQ9H1K0 784 aa9.76□□□□□ -0.85
RAB3IP-215ENST00000551641 TFCP2L1Q9NZI6 479 aa9.76□□□□□ -0.85
RAB3IP-215ENST00000551641 SYNE4Q8N205 404 aa9.75□□□□□ -0.85
RAB3IP-215ENST00000551641 UPF3BQ9BZI7 483 aaKnown RBP9.75□□□□□ -0.85
RAB3IP-215ENST00000551641 SNX14Q9Y5W7 946 aa9.75□□□□□ -0.85
RAB3IP-215ENST00000551641 NCLP19338 710 aaKnown RBP9.75□□□□□ -0.85
RAB3IP-215ENST00000551641 VSIG10Q8N0Z9 540 aa9.75□□□□□ -0.85
RAB3IP-215ENST00000551641 ANP32BQ92688 251 aaKnown RBP9.75□□□□□ -0.85
RAB3IP-215ENST00000551641 KCNB2Q92953 911 aa9.75□□□□□ -0.85
RAB3IP-215ENST00000551641 NSFL1CQ9UNZ2 370 aaKnown RBP9.75□□□□□ -0.85
RAB3IP-215ENST00000551641 HDAC5Q9UQL6 1122 aa9.75□□□□□ -0.85
RAB3IP-215ENST00000551641 UBE3BQ7Z3V4 1068 aa9.74□□□□□ -0.85
RAB3IP-215ENST00000551641 CHAMP1Q96JM3 812 aa9.74□□□□□ -0.85
RAB3IP-215ENST00000551641 RBM27Q9P2N5 1060 aaKnown RBP9.74□□□□□ -0.85
RAB3IP-215ENST00000551641 RTCBQ9Y3I0 505 aaKnown RBP9.74□□□□□ -0.85
RAB3IP-215ENST00000551641 RPAP1Q9BWH6 1393 aaPredicted RBP9.74□□□□□ -0.85
RAB3IP-215ENST00000551641 PLEKHG2Q9H7P9 1386 aa9.74□□□□□ -0.85
RAB3IP-215ENST00000551641 WDR33Q9C0J8 1336 aaKnown RBP9.74□□□□□ -0.85
RAB3IP-215ENST00000551641 BTAF1O14981 1849 aa9.74□□□□□ -0.85
RAB3IP-215ENST00000551641 USPL1Q5W0Q7 1092 aa9.74□□□□□ -0.85
RAB3IP-215ENST00000551641 MSL1Q68DK7 614 aa9.74□□□□□ -0.85
RAB3IP-215ENST00000551641 ZSCAN30Q86W11 494 aa9.74□□□□□ -0.85
RAB3IP-215ENST00000551641 ERC1Q8IUD2 1116 aa9.74□□□□□ -0.85
RAB3IP-215ENST00000551641 TMEM87AQ8NBN3 555 aa9.74□□□□□ -0.85
RAB3IP-215ENST00000551641 A0A087WZG4 1122 aa9.74□□□□□ -0.85
RAB3IP-215ENST00000551641 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.74□□□□□ -0.85
RAB3IP-215ENST00000551641 MAP4K4O95819 1239 aaPredicted RBP9.74□□□□□ -0.85
RAB3IP-215ENST00000551641 RFC4P35249 363 aa9.74□□□□□ -0.85
RAB3IP-215ENST00000551641 FAM89AQ96GI7 184 aa9.74□□□□□ -0.85
RAB3IP-215ENST00000551641 ZPR1O75312 459 aa9.73□□□□□ -0.85
RAB3IP-215ENST00000551641 IGKV5-2P06315 115 aa9.73□□□□□ -0.85
RAB3IP-215ENST00000551641 LRP10Q7Z4F1 713 aa9.73□□□□□ -0.85
RAB3IP-215ENST00000551641 RASEFQ8IZ41 740 aa9.73□□□□□ -0.85
RAB3IP-215ENST00000551641 CLASRPQ8N2M8 674 aaKnown RBP9.73□□□□□ -0.85
RAB3IP-215ENST00000551641 ECHDC1Q9NTX5 307 aa9.73□□□□□ -0.85
RAB3IP-215ENST00000551641 LINS1Q8NG48 757 aa9.73□□□□□ -0.85
RAB3IP-215ENST00000551641 PLBD2Q8NHP8 589 aa9.73□□□□□ -0.85
RAB3IP-215ENST00000551641 GTF2E1P29083 439 aaPredicted RBP9.72□□□□□ -0.85
RAB3IP-215ENST00000551641 ZNF827Q17R98 1081 aa9.72□□□□□ -0.85
RAB3IP-215ENST00000551641 RUFY3Q7L099 469 aa9.72□□□□□ -0.85
RAB3IP-215ENST00000551641 RUFY2Q8WXA3 655 aa9.72□□□□□ -0.85
RAB3IP-215ENST00000551641 ARHGEF1Q92888 912 aaKnown RBP9.72□□□□□ -0.85
RAB3IP-215ENST00000551641 METTL22Q9BUU2 404 aaPredicted RBP9.72□□□□□ -0.85
RAB3IP-215ENST00000551641 TM6SF1Q9BZW5 370 aa9.72□□□□□ -0.85
RAB3IP-215ENST00000551641 SNRKQ9NRH2 765 aa9.72□□□□□ -0.85
RAB3IP-215ENST00000551641 NIP7Q9Y221 180 aaKnown RBP eCLIP9.72□□□□□ -0.85
RAB3IP-215ENST00000551641 SYCE3A1L190 88 aa9.72□□□□□ -0.85
RAB3IP-215ENST00000551641 IL6STP40189 918 aaPredicted RBP9.72□□□□□ -0.85
RAB3IP-215ENST00000551641 AK2P54819 239 aa9.72□□□□□ -0.85
RAB3IP-215ENST00000551641 TRAPPC3LQ5T215 181 aa9.72□□□□□ -0.85
RAB3IP-215ENST00000551641 FOXD4L5Q5VV16 416 aaPredicted RBP9.72□□□□□ -0.85
RAB3IP-215ENST00000551641 CWC27Q6UX04 472 aaKnown RBP9.72□□□□□ -0.85
RAB3IP-215ENST00000551641 KIAA1211Q6ZU35 1233 aa9.72□□□□□ -0.85
RAB3IP-215ENST00000551641 NOL8Q76FK4 1167 aaKnown RBP9.72□□□□□ -0.85
RAB3IP-215ENST00000551641 FOXD4L4Q8WXT5 416 aaPredicted RBP9.72□□□□□ -0.85
RAB3IP-215ENST00000551641 KAZALD1Q96I82 304 aa9.72□□□□□ -0.85
RAB3IP-215ENST00000551641 LIMCH1Q9UPQ0 1083 aa9.72□□□□□ -0.85
RAB3IP-215ENST00000551641 NEURL1BA8MQ27 555 aa9.71□□□□□ -0.85
RAB3IP-215ENST00000551641 GRM8O00222 908 aa9.71□□□□□ -0.85
RAB3IP-215ENST00000551641 EIF5P55010 431 aaKnown RBP9.71□□□□□ -0.85
RAB3IP-215ENST00000551641 EVI5LQ96CN4 794 aa9.71□□□□□ -0.85
RAB3IP-215ENST00000551641 GPATCH3Q96I76 525 aa9.71□□□□□ -0.85
RAB3IP-215ENST00000551641 COL15A1P39059 1388 aa9.71□□□□□ -0.86
RAB3IP-215ENST00000551641 BAG6P46379 1132 aa9.71□□□□□ -0.86
RAB3IP-215ENST00000551641 OS9Q13438 667 aaPredicted RBP9.71□□□□□ -0.86
RAB3IP-215ENST00000551641 KLHL34Q8N239 644 aa9.71□□□□□ -0.86
RAB3IP-215ENST00000551641 SYAP1Q96A49 352 aaPredicted RBP9.71□□□□□ -0.86
RAB3IP-215ENST00000551641 PDGFDQ9GZP0 370 aaPredicted RBP9.71□□□□□ -0.86
RAB3IP-215ENST00000551641 DIAPH3Q9NSV4 1193 aa9.71□□□□□ -0.86
RAB3IP-215ENST00000551641 TRMT112Q9UI30 125 aaKnown RBP9.71□□□□□ -0.86
RAB3IP-215ENST00000551641 MAP3K15Q6ZN16 1313 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms