RNA–Protein interactions for RNA: ENST00000551594.1

CTDSP2-207, Transcript of CTD small phosphatase 2, humanhuman

TSL 3

Gene CTDSP2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-207ENST00000551594 EPHA10Q5JZY3 1008 aa23.68■■□□□ 1.38
CTDSP2-207ENST00000551594 RBM17Q96I25 401 aaKnown RBP23.68■■□□□ 1.38
CTDSP2-207ENST00000551594 SUCLG2Q96I99 432 aa23.68■■□□□ 1.38
CTDSP2-207ENST00000551594 PLA2G12BQ9BX93 195 aa23.68■■□□□ 1.38
CTDSP2-207ENST00000551594 ZNF219Q9P2Y4 722 aaPredicted RBP23.68■■□□□ 1.38
CTDSP2-207ENST00000551594 CTSWP56202 376 aa23.67■■□□□ 1.38
CTDSP2-207ENST00000551594 FOXO4P98177 505 aa23.67■■□□□ 1.38
CTDSP2-207ENST00000551594 GPR162Q16538 588 aa23.67■■□□□ 1.38
CTDSP2-207ENST00000551594 TTLL11Q8NHH1 800 aa23.67■■□□□ 1.38
CTDSP2-207ENST00000551594 CNKSR1Q969H4 720 aa23.67■■□□□ 1.38
CTDSP2-207ENST00000551594 MEIS3Q99687 375 aa23.67■■□□□ 1.38
CTDSP2-207ENST00000551594 C20orf194Q5TEA3 1177 aa23.66■■□□□ 1.38
CTDSP2-207ENST00000551594 KAZALD1Q96I82 304 aa23.66■■□□□ 1.38
CTDSP2-207ENST00000551594 COL4A1P02462 1669 aa23.65■■□□□ 1.38
CTDSP2-207ENST00000551594 ALDH1B1P30837 517 aa23.65■■□□□ 1.38
CTDSP2-207ENST00000551594 PRPF40BQ6NWY9 871 aaKnown RBP23.65■■□□□ 1.38
CTDSP2-207ENST00000551594 DDX46Q7L014 1031 aaKnown RBP23.65■■□□□ 1.38
CTDSP2-207ENST00000551594 ITPRIPQ8IWB1 547 aa23.65■■□□□ 1.38
CTDSP2-207ENST00000551594 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.65■■□□□ 1.38
CTDSP2-207ENST00000551594 CRAMP1Q96RY5 1269 aa23.65■■□□□ 1.38
CTDSP2-207ENST00000551594 SEC31BQ9NQW1 1179 aa23.65■■□□□ 1.38
CTDSP2-207ENST00000551594 CCDC152Q4G0S7 254 aa23.64■■□□□ 1.37
CTDSP2-207ENST00000551594 SLC51AQ86UW1 340 aa23.64■■□□□ 1.37
CTDSP2-207ENST00000551594 GREM2Q9H772 168 aa23.64■■□□□ 1.37
CTDSP2-207ENST00000551594 CSF1RP07333 972 aa23.63■■□□□ 1.37
CTDSP2-207ENST00000551594 MS4A1P11836 297 aa23.63■■□□□ 1.37
CTDSP2-207ENST00000551594 RRP1P56182 461 aaKnown RBP23.63■■□□□ 1.37
CTDSP2-207ENST00000551594 ARFGEF1Q9Y6D6 1849 aa23.63■■□□□ 1.37
CTDSP2-207ENST00000551594 UTRNP46939 3433 aa23.62■■□□□ 1.37
CTDSP2-207ENST00000551594 C21orf2O43822 256 aa23.62■■□□□ 1.37
CTDSP2-207ENST00000551594 UBTFL1P0CB47 393 aaPredicted RBP23.62■■□□□ 1.37
CTDSP2-207ENST00000551594 LMBR1LQ6UX01 489 aa23.62■■□□□ 1.37
CTDSP2-207ENST00000551594 OLFM4Q6UX06 510 aa23.62■■□□□ 1.37
CTDSP2-207ENST00000551594 CELF1Q92879 486 aaKnown RBP23.62■■□□□ 1.37
CTDSP2-207ENST00000551594 BICC1Q9H694 974 aaKnown RBP23.62■■□□□ 1.37
CTDSP2-207ENST00000551594 FAM161AQ3B820 660 aa23.61■■□□□ 1.37
CTDSP2-207ENST00000551594 COG6Q9Y2V7 657 aa23.61■■□□□ 1.37
CTDSP2-207ENST00000551594 CHMP3Q9Y3E7 222 aa23.61■■□□□ 1.37
CTDSP2-207ENST00000551594 LRRFIP2Q9Y608 721 aaKnown RBP23.61■■□□□ 1.37
CTDSP2-207ENST00000551594 GRAPQ13588 217 aa23.6■■□□□ 1.37
CTDSP2-207ENST00000551594 ANKRD44Q8N8A2 993 aa23.6■■□□□ 1.37
CTDSP2-207ENST00000551594 GRAPLQ8TC17 118 aaPredicted RBP23.6■■□□□ 1.37
CTDSP2-207ENST00000551594 PPEF1O14829 653 aaPredicted RBP23.59■■□□□ 1.37
CTDSP2-207ENST00000551594 GNAI3P08754 354 aa23.59■■□□□ 1.37
CTDSP2-207ENST00000551594 PDE3AQ14432 1141 aa23.59■■□□□ 1.37
CTDSP2-207ENST00000551594 C7orf43Q8WVR3 580 aa23.59■■□□□ 1.37
CTDSP2-207ENST00000551594 DCAF8L1A6NGE4 600 aa23.58■■□□□ 1.37
CTDSP2-207ENST00000551594 ZBTB7BO15156 539 aaPredicted RBP23.58■■□□□ 1.37
CTDSP2-207ENST00000551594 ITGA6P23229 1130 aa23.58■■□□□ 1.37
CTDSP2-207ENST00000551594 RTL9Q8NET4 1388 aa23.57■■□□□ 1.36
CTDSP2-207ENST00000551594 BBOX1O75936 387 aa23.57■■□□□ 1.36
CTDSP2-207ENST00000551594 RPS8P62241 208 aaKnown RBP23.57■■□□□ 1.36
CTDSP2-207ENST00000551594 MVPQ14764 893 aaKnown RBP23.57■■□□□ 1.36
CTDSP2-207ENST00000551594 SUPT16HQ9Y5B9 1047 aaKnown RBP23.57■■□□□ 1.36
CTDSP2-207ENST00000551594 SPEF2Q9C093 1822 aa23.56■■□□□ 1.36
CTDSP2-207ENST00000551594 RABL6Q3YEC7 729 aaPredicted RBP23.56■■□□□ 1.36
CTDSP2-207ENST00000551594 ARHGAP27Q6ZUM4 889 aa23.56■■□□□ 1.36
CTDSP2-207ENST00000551594 GRIN3BO60391 1043 aa23.55■■□□□ 1.36
CTDSP2-207ENST00000551594 ZNF594Q96JF6 807 aaPredicted RBP23.55■■□□□ 1.36
CTDSP2-207ENST00000551594 C1orf115Q9H7X2 142 aa23.55■■□□□ 1.36
CTDSP2-207ENST00000551594 ANKRD18BA2A2Z9 1011 aa23.54■■□□□ 1.36
CTDSP2-207ENST00000551594 GNAI2P04899 355 aa23.54■■□□□ 1.36
CTDSP2-207ENST00000551594 IFIT5Q13325 482 aaKnown RBP23.54■■□□□ 1.36
CTDSP2-207ENST00000551594 ANKRD18AQ8IVF6 992 aa23.54■■□□□ 1.36
CTDSP2-207ENST00000551594 CDC5LQ99459 802 aaKnown RBP23.54■■□□□ 1.36
CTDSP2-207ENST00000551594 ATP6V0A2Q9Y487 856 aa23.54■■□□□ 1.36
CTDSP2-207ENST00000551594 SP8Q8IXZ3 490 aa23.53■■□□□ 1.36
CTDSP2-207ENST00000551594 CCDC57Q2TAC2 916 aa23.52■■□□□ 1.36
CTDSP2-207ENST00000551594 DDX19BQ9UMR2 479 aa23.52■■□□□ 1.36
CTDSP2-207ENST00000551594 HDAC5Q9UQL6 1122 aa23.52■■□□□ 1.36
CTDSP2-207ENST00000551594 FER1L6Q2WGJ9 1857 aa23.51■■□□□ 1.35
CTDSP2-207ENST00000551594 RASSF7Q02833 373 aa23.51■■□□□ 1.35
CTDSP2-207ENST00000551594 CCDC93Q567U6 631 aa23.51■■□□□ 1.35
CTDSP2-207ENST00000551594 NFKBIEO00221 500 aa23.5■■□□□ 1.35
CTDSP2-207ENST00000551594 IGHMBP2P38935 993 aaKnown RBP23.5■■□□□ 1.35
CTDSP2-207ENST00000551594 SOGA3Q5TF21 947 aa23.5■■□□□ 1.35
CTDSP2-207ENST00000551594 KLHDC4Q8TBB5 520 aa23.5■■□□□ 1.35
CTDSP2-207ENST00000551594 TAF7LQ5H9L4 462 aa23.49■■□□□ 1.35
CTDSP2-207ENST00000551594 TMC4Q7Z404 712 aa23.49■■□□□ 1.35
CTDSP2-207ENST00000551594 BSDC1Q9NW68 430 aaPredicted RBP23.49■■□□□ 1.35
CTDSP2-207ENST00000551594 LRRC37AA6NMS7 1700 aa23.48■■□□□ 1.35
CTDSP2-207ENST00000551594 RFX5P48382 616 aaPredicted RBP23.48■■□□□ 1.35
CTDSP2-207ENST00000551594 CC2D2BQ6DHV5 1058 aa23.48■■□□□ 1.35
CTDSP2-207ENST00000551594 CRBNQ96SW2 442 aa23.48■■□□□ 1.35
CTDSP2-207ENST00000551594 MPHOSPH8Q99549 860 aa23.48■■□□□ 1.35
CTDSP2-207ENST00000551594 TMX4Q9H1E5 349 aaPredicted RBP23.48■■□□□ 1.35
CTDSP2-207ENST00000551594 ZBTB40Q9NUA8 1239 aa23.48■■□□□ 1.35
CTDSP2-207ENST00000551594 SNED1Q8TER0 1413 aa23.48■■□□□ 1.35
CTDSP2-207ENST00000551594 GPSM2P81274 684 aa23.47■■□□□ 1.35
CTDSP2-207ENST00000551594 RTKN2Q8IZC4 609 aa23.47■■□□□ 1.35
CTDSP2-207ENST00000551594 PUS3Q9BZE2 481 aaKnown RBP23.47■■□□□ 1.35
CTDSP2-207ENST00000551594 CCDC88AQ3V6T2 1871 aa23.47■■□□□ 1.35
CTDSP2-207ENST00000551594 PRELPP51888 382 aa23.46■■□□□ 1.35
CTDSP2-207ENST00000551594 MPNDQ8N594 471 aa23.46■■□□□ 1.35
CTDSP2-207ENST00000551594 MINPP1Q9UNW1 487 aa23.46■■□□□ 1.35
CTDSP2-207ENST00000551594 NSFL1CQ9UNZ2 370 aaKnown RBP23.46■■□□□ 1.35
CTDSP2-207ENST00000551594 SBF1O95248 1867 aa23.45■■□□□ 1.35
CTDSP2-207ENST00000551594 PNMA6EA0A0J9YXQ4 647 aa23.45■■□□□ 1.34
CTDSP2-207ENST00000551594 SRGAP3O43295 1099 aa23.45■■□□□ 1.34
CTDSP2-207ENST00000551594 DPP8Q6V1X1 898 aaPredicted RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms