RNA–Protein interactions for RNA: ENST00000551424.5

CNTN1-209, Transcript of contactin 1, humanhuman

TSL 3

Gene CNTN1, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1-209ENST00000551424 RTFDC1Q9BY42 306 aaPredicted RBP29.77■■■□□ 2.36
CNTN1-209ENST00000551424 VPS33BQ9H267 617 aa29.77■■■□□ 2.36
CNTN1-209ENST00000551424 DDX60Q8IY21 1712 aaKnown RBP29.76■■■□□ 2.36
CNTN1-209ENST00000551424 RASSF10A6NK89 507 aa29.76■■■□□ 2.35
CNTN1-209ENST00000551424 ATP5J2-PTCD1G3V325 749 aa29.75■■■□□ 2.35
CNTN1-209ENST00000551424 ANKRD13DQ6ZTN6 518 aa29.75■■■□□ 2.35
CNTN1-209ENST00000551424 GPRC5DQ9NZD1 345 aa29.75■■■□□ 2.35
CNTN1-209ENST00000551424 DBF4Q9UBU7 674 aaPredicted RBP29.75■■■□□ 2.35
CNTN1-209ENST00000551424 TRAF5O00463 557 aa29.74■■■□□ 2.35
CNTN1-209ENST00000551424 HOXB7P09629 217 aa29.74■■■□□ 2.35
CNTN1-209ENST00000551424 GMPSP49915 693 aaPredicted RBP29.74■■■□□ 2.35
CNTN1-209ENST00000551424 DUSP27Q5VZP5 1158 aa29.74■■■□□ 2.35
CNTN1-209ENST00000551424 PAXIP1Q6ZW49 1069 aaPredicted RBP29.74■■■□□ 2.35
CNTN1-209ENST00000551424 ADARB2Q9NS39 739 aaKnown RBP29.74■■■□□ 2.35
CNTN1-209ENST00000551424 RAD17O75943 681 aa29.73■■■□□ 2.35
CNTN1-209ENST00000551424 KIAA2012Q0VF49 1180 aa29.73■■■□□ 2.35
CNTN1-209ENST00000551424 RTL5Q5HYW3 569 aaPredicted RBP29.73■■■□□ 2.35
CNTN1-209ENST00000551424 CIAPIN1Q6FI81 312 aa29.73■■■□□ 2.35
CNTN1-209ENST00000551424 FAM89AQ96GI7 184 aa29.73■■■□□ 2.35
CNTN1-209ENST00000551424 CTCFP49711 727 aaPredicted RBP29.72■■■□□ 2.35
CNTN1-209ENST00000551424 CFAP44Q96MT7 982 aa29.72■■■□□ 2.35
CNTN1-209ENST00000551424 ISCA1Q9BUE6 129 aa29.72■■■□□ 2.35
CNTN1-209ENST00000551424 TRPM7Q96QT4 1865 aa29.72■■■□□ 2.35
CNTN1-209ENST00000551424 WDR33Q9C0J8 1336 aaKnown RBP29.71■■■□□ 2.35
CNTN1-209ENST00000551424 BCL2L13Q9BXK5 485 aa29.71■■■□□ 2.35
CNTN1-209ENST00000551424 MBIPQ9NS73 344 aa29.71■■■□□ 2.35
CNTN1-209ENST00000551424 DUOX1Q9NRD9 1551 aa29.7■■■□□ 2.35
CNTN1-209ENST00000551424 GRM1Q13255 1194 aa29.7■■■□□ 2.35
CNTN1-209ENST00000551424 HYPKQ9NX55 129 aa29.7■■■□□ 2.35
CNTN1-209ENST00000551424 WBP1LQ9NX94 342 aa29.7■■■□□ 2.35
CNTN1-209ENST00000551424 LRRC37AA6NMS7 1700 aa29.7■■■□□ 2.34
CNTN1-209ENST00000551424 TMC4Q7Z404 712 aa29.69■■■□□ 2.34
CNTN1-209ENST00000551424 CELF1Q92879 486 aaKnown RBP29.68■■■□□ 2.34
CNTN1-209ENST00000551424 PRKRIP1Q9H875 184 aaPredicted RBP29.68■■■□□ 2.34
CNTN1-209ENST00000551424 PRDM10Q9NQV6 1147 aa29.68■■■□□ 2.34
CNTN1-209ENST00000551424 TNIP1Q15025 636 aa29.67■■■□□ 2.34
CNTN1-209ENST00000551424 APAF1O14727 1248 aa29.66■■■□□ 2.34
CNTN1-209ENST00000551424 LBX1P52954 281 aa29.66■■■□□ 2.34
CNTN1-209ENST00000551424 CAPNS2Q96L46 248 aa29.66■■■□□ 2.34
CNTN1-209ENST00000551424 NSFL1CQ9UNZ2 370 aaKnown RBP29.66■■■□□ 2.34
CNTN1-209ENST00000551424 YDJCA8MPS7 323 aa29.65■■■□□ 2.34
CNTN1-209ENST00000551424 ELL2O00472 640 aaPredicted RBP29.65■■■□□ 2.34
CNTN1-209ENST00000551424 SF3B3Q15393 1217 aaKnown RBP29.65■■■□□ 2.34
CNTN1-209ENST00000551424 CST9Q5W186 159 aa29.65■■■□□ 2.34
CNTN1-209ENST00000551424 RIC3Q7Z5B4 369 aa29.65■■■□□ 2.34
CNTN1-209ENST00000551424 COL4A1P02462 1669 aa29.65■■■□□ 2.34
CNTN1-209ENST00000551424 IRS4O14654 1257 aaPredicted RBP29.64■■■□□ 2.34
CNTN1-209ENST00000551424 GOLGA2Q08379 1002 aa29.64■■■□□ 2.34
CNTN1-209ENST00000551424 CYP4F22Q6NT55 531 aa29.64■■■□□ 2.34
CNTN1-209ENST00000551424 GLIS2Q9BZE0 524 aaPredicted RBP29.64■■■□□ 2.34
CNTN1-209ENST00000551424 CDHR2Q9BYE9 1310 aa29.64■■■□□ 2.34
CNTN1-209ENST00000551424 C6orf229H3BNL8 230 aa29.63■■■□□ 2.33
CNTN1-209ENST00000551424 RIMBP2O15034 1052 aa29.63■■■□□ 2.33
CNTN1-209ENST00000551424 MAP2K1Q02750 393 aaPredicted RBP29.63■■■□□ 2.33
CNTN1-209ENST00000551424 TRPM4Q8TD43 1214 aa29.63■■■□□ 2.33
CNTN1-209ENST00000551424 SHTN1A0MZ66 631 aa29.62■■■□□ 2.33
CNTN1-209ENST00000551424 ZNF853P0CG23 659 aa29.62■■■□□ 2.33
CNTN1-209ENST00000551424 ECE1P42892 770 aa29.62■■■□□ 2.33
CNTN1-209ENST00000551424 WASHC4Q2M389 1173 aa29.62■■■□□ 2.33
CNTN1-209ENST00000551424 PHAXQ9H814 394 aaKnown RBP29.62■■■□□ 2.33
CNTN1-209ENST00000551424 DBNDD1Q9H9R9 158 aa29.62■■■□□ 2.33
CNTN1-209ENST00000551424 IFT57Q9NWB7 429 aa29.62■■■□□ 2.33
CNTN1-209ENST00000551424 CELF2O95319 508 aaKnown RBP29.61■■■□□ 2.33
CNTN1-209ENST00000551424 HSPA8P11142 646 aaKnown RBP29.61■■■□□ 2.33
CNTN1-209ENST00000551424 GPSM2P81274 684 aa29.61■■■□□ 2.33
CNTN1-209ENST00000551424 CNOT7Q9UIV1 285 aaKnown RBP29.61■■■□□ 2.33
CNTN1-209ENST00000551424 TLL2Q9Y6L7 1015 aa29.61■■■□□ 2.33
CNTN1-209ENST00000551424 THSD7BQ9C0I4 1608 aa29.6■■■□□ 2.33
CNTN1-209ENST00000551424 HIRAP54198 1017 aaPredicted RBP29.6■■■□□ 2.33
CNTN1-209ENST00000551424 GNAI1P63096 354 aa29.6■■■□□ 2.33
CNTN1-209ENST00000551424 CALD1Q05682 793 aaKnown RBP29.6■■■□□ 2.33
CNTN1-209ENST00000551424 TRIM28Q13263 835 aaKnown RBP29.6■■■□□ 2.33
CNTN1-209ENST00000551424 MYD88Q99836 296 aa29.6■■■□□ 2.33
CNTN1-209ENST00000551424 ZNF408Q9H9D4 720 aa29.6■■■□□ 2.33
CNTN1-209ENST00000551424 ZBTB12Q9Y330 459 aaPredicted RBP29.6■■■□□ 2.33
CNTN1-209ENST00000551424 MICALL2Q8IY33 904 aa29.59■■■□□ 2.33
CNTN1-209ENST00000551424 GPR101Q96P66 508 aaPredicted RBP29.59■■■□□ 2.33
CNTN1-209ENST00000551424 H7C1D1 291 aa29.58■■■□□ 2.33
CNTN1-209ENST00000551424 POLLQ9UGP5 575 aa29.58■■■□□ 2.33
CNTN1-209ENST00000551424 PSMD14O00487 310 aa29.57■■■□□ 2.32
CNTN1-209ENST00000551424 DOK7Q18PE1 504 aa29.57■■■□□ 2.32
CNTN1-209ENST00000551424 RPS8P62241 208 aaKnown RBP29.56■■■□□ 2.32
CNTN1-209ENST00000551424 ZBTB38Q8NAP3 1195 aaPredicted RBP29.56■■■□□ 2.32
CNTN1-209ENST00000551424 C8orf58Q8NAV2 365 aa29.56■■■□□ 2.32
CNTN1-209ENST00000551424 JARID2Q92833 1246 aaPredicted RBP29.56■■■□□ 2.32
CNTN1-209ENST00000551424 BEGAINQ9BUH8 593 aa29.56■■■□□ 2.32
CNTN1-209ENST00000551424 PGAP2Q9UHJ9 254 aa29.56■■■□□ 2.32
CNTN1-209ENST00000551424 ECE2O60344 883 aa29.55■■■□□ 2.32
CNTN1-209ENST00000551424 AOC2O75106 756 aa29.55■■■□□ 2.32
CNTN1-209ENST00000551424 ZC3H15Q8WU90 426 aaKnown RBP29.55■■■□□ 2.32
CNTN1-209ENST00000551424 EYA3Q99504 573 aa29.55■■■□□ 2.32
CNTN1-209ENST00000551424 SEC31BQ9NQW1 1179 aa29.55■■■□□ 2.32
CNTN1-209ENST00000551424 CDC37L1Q7L3B6 337 aa29.54■■■□□ 2.32
CNTN1-209ENST00000551424 SAMD7Q7Z3H4 446 aa29.53■■■□□ 2.32
CNTN1-209ENST00000551424 SAPCD2Q86UD0 394 aa29.53■■■□□ 2.32
CNTN1-209ENST00000551424 TBC1D16Q8TBP0 767 aa29.53■■■□□ 2.32
CNTN1-209ENST00000551424 CCDC85AQ96PX6 553 aaPredicted RBP29.53■■■□□ 2.32
CNTN1-209ENST00000551424 TBC1D10BQ4KMP7 808 aaPredicted RBP29.52■■■□□ 2.32
CNTN1-209ENST00000551424 USP48Q86UV5 1035 aa29.52■■■□□ 2.32
CNTN1-209ENST00000551424 KCNQ5Q9NR82 932 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms