RNA–Protein interactions for RNA: ENST00000551206.5

USP15-217, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-217ENST00000551206 NEURL1BA8MQ27 555 aa16.64■□□□□ 0.25
USP15-217ENST00000551206 F6X3S4 739 aa16.64■□□□□ 0.25
USP15-217ENST00000551206 PCCAP05165 728 aaPredicted RBP16.64■□□□□ 0.25
USP15-217ENST00000551206 SF3B3Q15393 1217 aaKnown RBP16.64■□□□□ 0.25
USP15-217ENST00000551206 CC2D2BQ6DHV5 1058 aa16.64■□□□□ 0.25
USP15-217ENST00000551206 REM2Q8IYK8 340 aaPredicted RBP16.64■□□□□ 0.25
USP15-217ENST00000551206 DNAAF4Q8WXU2 420 aa16.64■□□□□ 0.25
USP15-217ENST00000551206 ARFGEF2Q9Y6D5 1785 aa16.64■□□□□ 0.25
USP15-217ENST00000551206 SBF1O95248 1867 aa16.63■□□□□ 0.25
USP15-217ENST00000551206 CCDC85AQ96PX6 553 aaPredicted RBP16.63■□□□□ 0.25
USP15-217ENST00000551206 RRAGCQ9HB90 399 aa16.63■□□□□ 0.25
USP15-217ENST00000551206 ATP6V0A2Q9Y487 856 aa16.63■□□□□ 0.25
USP15-217ENST00000551206 KDM2BQ8NHM5 1336 aa16.63■□□□□ 0.25
USP15-217ENST00000551206 HSP90B1P14625 803 aaKnown RBP16.62■□□□□ 0.25
USP15-217ENST00000551206 C1QTNF8P60827 252 aa16.62■□□□□ 0.25
USP15-217ENST00000551206 GRAPQ13588 217 aa16.62■□□□□ 0.25
USP15-217ENST00000551206 GRAPLQ8TC17 118 aaPredicted RBP16.62■□□□□ 0.25
USP15-217ENST00000551206 GLTPD2A6NH11 291 aa16.61■□□□□ 0.25
USP15-217ENST00000551206 KIF3CO14782 793 aa16.61■□□□□ 0.25
USP15-217ENST00000551206 PDE8AO60658 829 aa16.61■□□□□ 0.25
USP15-217ENST00000551206 GCKRQ14397 625 aa16.61■□□□□ 0.25
USP15-217ENST00000551206 DPY19L2Q6NUT2 758 aa16.61■□□□□ 0.25
USP15-217ENST00000551206 UBE3BQ7Z3V4 1068 aa16.61■□□□□ 0.25
USP15-217ENST00000551206 SP8Q8IXZ3 490 aa16.61■□□□□ 0.25
USP15-217ENST00000551206 CELF1Q92879 486 aaKnown RBP16.61■□□□□ 0.25
USP15-217ENST00000551206 IARSP41252 1262 aaKnown RBP16.6■□□□□ 0.25
USP15-217ENST00000551206 GRIPAP1Q4V328 841 aa16.6■□□□□ 0.25
USP15-217ENST00000551206 SLC4A10Q6U841 1118 aa16.6■□□□□ 0.25
USP15-217ENST00000551206 TRMT2AQ8IZ69 625 aaKnown RBP16.6■□□□□ 0.25
USP15-217ENST00000551206 LINS1Q8NG48 757 aa16.6■□□□□ 0.25
USP15-217ENST00000551206 PSMD1Q99460 953 aa16.6■□□□□ 0.25
USP15-217ENST00000551206 BCL2L13Q9BXK5 485 aa16.6■□□□□ 0.25
USP15-217ENST00000551206 SEC31BQ9NQW1 1179 aa16.6■□□□□ 0.25
USP15-217ENST00000551206 ZC3H4Q9UPT8 1303 aaKnown RBP16.6■□□□□ 0.25
USP15-217ENST00000551206 FER1L6Q2WGJ9 1857 aa16.6■□□□□ 0.25
USP15-217ENST00000551206 H7C1W4 665 aa16.59■□□□□ 0.25
USP15-217ENST00000551206 RPS8P62241 208 aaKnown RBP16.59■□□□□ 0.25
USP15-217ENST00000551206 HNRNPUQ00839 825 aaKnown RBP eCLIP16.59■□□□□ 0.25
USP15-217ENST00000551206 CCDC152Q4G0S7 254 aa16.59■□□□□ 0.25
USP15-217ENST00000551206 MPNDQ8N594 471 aa16.59■□□□□ 0.25
USP15-217ENST00000551206 MRPL50Q8N5N7 158 aaKnown RBP16.59■□□□□ 0.25
USP15-217ENST00000551206 SSH1Q8WYL5 1049 aa16.59■□□□□ 0.25
USP15-217ENST00000551206 CCDC88AQ3V6T2 1871 aa16.59■□□□□ 0.25
USP15-217ENST00000551206 BEND3Q5T5X7 828 aa16.58■□□□□ 0.24
USP15-217ENST00000551206 DPP8Q6V1X1 898 aaPredicted RBP16.58■□□□□ 0.24
USP15-217ENST00000551206 CDHR2Q9BYE9 1310 aa16.57■□□□□ 0.24
USP15-217ENST00000551206 HAX1O00165 279 aa16.57■□□□□ 0.24
USP15-217ENST00000551206 DDNO94850 711 aaPredicted RBP16.57■□□□□ 0.24
USP15-217ENST00000551206 C16orf71Q8IYS4 520 aaPredicted RBP16.57■□□□□ 0.24
USP15-217ENST00000551206 LARGE2Q8N3Y3 721 aa16.57■□□□□ 0.24
USP15-217ENST00000551206 JDP2Q8WYK2 163 aa16.57■□□□□ 0.24
USP15-217ENST00000551206 NSFL1CQ9UNZ2 370 aaKnown RBP16.57■□□□□ 0.24
USP15-217ENST00000551206 CTSWP56202 376 aa16.56■□□□□ 0.24
USP15-217ENST00000551206 TMC4Q7Z404 712 aa16.56■□□□□ 0.24
USP15-217ENST00000551206 TTLL11Q8NHH1 800 aa16.56■□□□□ 0.24
USP15-217ENST00000551206 LAMB2P55268 1798 aa16.56■□□□□ 0.24
USP15-217ENST00000551206 DDX60Q8IY21 1712 aaKnown RBP16.56■□□□□ 0.24
USP15-217ENST00000551206 SNED1Q8TER0 1413 aa16.55■□□□□ 0.24
USP15-217ENST00000551206 TAF1P21675 1872 aa16.55■□□□□ 0.24
USP15-217ENST00000551206 PPIP5K2O43314 1243 aa16.55■□□□□ 0.24
USP15-217ENST00000551206 VEGFAP15692 232 aaPredicted RBP16.55■□□□□ 0.24
USP15-217ENST00000551206 AOC3Q16853 763 aa16.55■□□□□ 0.24
USP15-217ENST00000551206 SUPT20HQ8NEM7 779 aa16.55■□□□□ 0.24
USP15-217ENST00000551206 GREM2Q9H772 168 aa16.55■□□□□ 0.24
USP15-217ENST00000551206 SMC4Q9NTJ3 1288 aa16.55■□□□□ 0.24
USP15-217ENST00000551206 ZNF541Q9H0D2 1346 aa16.54■□□□□ 0.24
USP15-217ENST00000551206 TOMM70O94826 608 aa16.54■□□□□ 0.24
USP15-217ENST00000551206 CASP7P55210 303 aa16.54■□□□□ 0.24
USP15-217ENST00000551206 GPSM2P81274 684 aa16.54■□□□□ 0.24
USP15-217ENST00000551206 ANKRD18AQ8IVF6 992 aa16.54■□□□□ 0.24
USP15-217ENST00000551206 CACNA1FO60840 1977 aa16.54■□□□□ 0.24
USP15-217ENST00000551206 POTECB2RU33 542 aa16.53■□□□□ 0.24
USP15-217ENST00000551206 C6orf229H3BNL8 230 aa16.53■□□□□ 0.24
USP15-217ENST00000551206 FZD9O00144 591 aa16.53■□□□□ 0.24
USP15-217ENST00000551206 ALDH1L2Q3SY69 923 aa16.53■□□□□ 0.24
USP15-217ENST00000551206 NIM1KQ8IY84 436 aa16.53■□□□□ 0.24
USP15-217ENST00000551206 RTFDC1Q9BY42 306 aaPredicted RBP16.53■□□□□ 0.24
USP15-217ENST00000551206 SRCIN1Q9C0H9 1055 aa16.53■□□□□ 0.24
USP15-217ENST00000551206 C9orf78Q9NZ63 289 aaPredicted RBP16.53■□□□□ 0.24
USP15-217ENST00000551206 GRM8O00222 908 aa16.52■□□□□ 0.24
USP15-217ENST00000551206 EIF6P56537 245 aaKnown RBP16.52■□□□□ 0.24
USP15-217ENST00000551206 CDC5LQ99459 802 aaKnown RBP16.52■□□□□ 0.24
USP15-217ENST00000551206 ANKIB1Q9P2G1 1089 aa16.52■□□□□ 0.24
USP15-217ENST00000551206 GJA3Q9Y6H8 435 aa16.52■□□□□ 0.24
USP15-217ENST00000551206 PTPRCP08575 1304 aa16.51■□□□□ 0.23
USP15-217ENST00000551206 RIMBP2O15034 1052 aa16.51■□□□□ 0.23
USP15-217ENST00000551206 ALDH1L1O75891 902 aa16.51■□□□□ 0.23
USP15-217ENST00000551206 CT47B1P0C2W7 299 aaPredicted RBP16.51■□□□□ 0.23
USP15-217ENST00000551206 PLA2G12BQ9BX93 195 aa16.51■□□□□ 0.23
USP15-217ENST00000551206 POLLQ9UGP5 575 aa16.51■□□□□ 0.23
USP15-217ENST00000551206 NOB1Q9ULX3 412 aaKnown RBP16.51■□□□□ 0.23
USP15-217ENST00000551206 CHMP3Q9Y3E7 222 aa16.51■□□□□ 0.23
USP15-217ENST00000551206 TIAM2Q8IVF5 1701 aa16.5■□□□□ 0.23
USP15-217ENST00000551206 COL4A1P02462 1669 aa16.5■□□□□ 0.23
USP15-217ENST00000551206 WASHC4Q2M389 1173 aa16.5■□□□□ 0.23
USP15-217ENST00000551206 FAM161AQ3B820 660 aa16.5■□□□□ 0.23
USP15-217ENST00000551206 GPR101Q96P66 508 aaPredicted RBP16.5■□□□□ 0.23
USP15-217ENST00000551206 VPS33BQ9H267 617 aa16.5■□□□□ 0.23
USP15-217ENST00000551206 ZNRF3Q9ULT6 936 aa16.5■□□□□ 0.23
USP15-217ENST00000551206 DICER1Q9UPY3 1922 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms