RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 EPHA10Q5JZY3 1008 aa17.61■□□□□ 0.41
CACNB3-216ENST00000550391 PLA2G12BQ9BX93 195 aa17.61■□□□□ 0.41
CACNB3-216ENST00000550391 BICC1Q9H694 974 aaKnown RBP17.61■□□□□ 0.41
CACNB3-216ENST00000550391 KDM2BQ8NHM5 1336 aa17.61■□□□□ 0.41
CACNB3-216ENST00000550391 LAMB2P55268 1798 aa17.61■□□□□ 0.41
CACNB3-216ENST00000550391 FAM177BA6PVY3 158 aa17.6■□□□□ 0.41
CACNB3-216ENST00000550391 HMMRO75330 724 aa17.6■□□□□ 0.41
CACNB3-216ENST00000550391 TM4SF1P30408 202 aa17.6■□□□□ 0.41
CACNB3-216ENST00000550391 FOXO4P98177 505 aa17.6■□□□□ 0.41
CACNB3-216ENST00000550391 RABL6Q3YEC7 729 aaPredicted RBP17.6■□□□□ 0.41
CACNB3-216ENST00000550391 CENPQQ7L2Z9 268 aaPredicted RBP17.6■□□□□ 0.41
CACNB3-216ENST00000550391 SYNE4Q8N205 404 aa17.6■□□□□ 0.41
CACNB3-216ENST00000550391 SH3TC1Q8TE82 1336 aa17.6■□□□□ 0.41
CACNB3-216ENST00000550391 CARMIL3Q8ND23 1372 aa17.6■□□□□ 0.41
CACNB3-216ENST00000550391 DDX60Q8IY21 1712 aaKnown RBP17.6■□□□□ 0.41
CACNB3-216ENST00000550391 PNMA6EA0A0J9YXQ4 647 aa17.59■□□□□ 0.41
CACNB3-216ENST00000550391 C16orf71Q8IYS4 520 aaPredicted RBP17.59■□□□□ 0.41
CACNB3-216ENST00000550391 NLGN1Q8N2Q7 840 aa17.59■□□□□ 0.41
CACNB3-216ENST00000550391 IRS4O14654 1257 aaPredicted RBP17.58■□□□□ 0.4
CACNB3-216ENST00000550391 HTRA3P83110 453 aa17.58■□□□□ 0.4
CACNB3-216ENST00000550391 POLA2Q14181 598 aa17.58■□□□□ 0.4
CACNB3-216ENST00000550391 SSH3Q8TE77 659 aa17.58■□□□□ 0.4
CACNB3-216ENST00000550391 NYXQ9GZU5 481 aa17.58■□□□□ 0.4
CACNB3-216ENST00000550391 MYH3P11055 1940 aa17.57■□□□□ 0.4
CACNB3-216ENST00000550391 HSP90B1P14625 803 aaKnown RBP17.57■□□□□ 0.4
CACNB3-216ENST00000550391 NBPF5PQ86XG9 351 aaPredicted RBP17.57■□□□□ 0.4
CACNB3-216ENST00000550391 NUTM1Q86Y26 1132 aa17.57■□□□□ 0.4
CACNB3-216ENST00000550391 SRGAP3O43295 1099 aa17.56■□□□□ 0.4
CACNB3-216ENST00000550391 PDE8AO60658 829 aa17.56■□□□□ 0.4
CACNB3-216ENST00000550391 ERFEQ4G0M1 354 aa17.56■□□□□ 0.4
CACNB3-216ENST00000550391 SLC10A5Q5PT55 438 aa17.56■□□□□ 0.4
CACNB3-216ENST00000550391 LMBR1LQ6UX01 489 aa17.56■□□□□ 0.4
CACNB3-216ENST00000550391 TPTE2Q6XPS3 522 aa17.56■□□□□ 0.4
CACNB3-216ENST00000550391 NRXN2Q9P2S2 1712 aa17.55■□□□□ 0.4
CACNB3-216ENST00000550391 POLRMTO00411 1230 aaKnown RBP17.55■□□□□ 0.4
CACNB3-216ENST00000550391 CSF1RP07333 972 aa17.55■□□□□ 0.4
CACNB3-216ENST00000550391 HSPA1AP0DMV8 641 aaKnown RBP17.55■□□□□ 0.4
CACNB3-216ENST00000550391 HSPA1BP0DMV9 641 aaKnown RBP17.55■□□□□ 0.4
CACNB3-216ENST00000550391 DDR1Q08345 913 aa17.55■□□□□ 0.4
CACNB3-216ENST00000550391 SMC5Q8IY18 1101 aa17.55■□□□□ 0.4
CACNB3-216ENST00000550391 GCC1Q96CN9 775 aa17.55■□□□□ 0.4
CACNB3-216ENST00000550391 DCTPP1Q9H773 170 aa17.55■□□□□ 0.4
CACNB3-216ENST00000550391 SERPINB2P05120 415 aa17.54■□□□□ 0.4
CACNB3-216ENST00000550391 HCLS1P14317 486 aaPredicted RBP17.54■□□□□ 0.4
CACNB3-216ENST00000550391 GTF2E1P29083 439 aaPredicted RBP17.54■□□□□ 0.4
CACNB3-216ENST00000550391 CTSWP56202 376 aa17.54■□□□□ 0.4
CACNB3-216ENST00000550391 ABCC12Q96J65 1359 aa17.53■□□□□ 0.4
CACNB3-216ENST00000550391 RFX5P48382 616 aaPredicted RBP17.53■□□□□ 0.4
CACNB3-216ENST00000550391 TTLL11Q8NHH1 800 aa17.53■□□□□ 0.4
CACNB3-216ENST00000550391 NMRK2Q9NPI5 230 aa17.53■□□□□ 0.4
CACNB3-216ENST00000550391 RIC1Q4ADV7 1423 aa17.53■□□□□ 0.4
CACNB3-216ENST00000550391 MSL1Q68DK7 614 aa17.52■□□□□ 0.4
CACNB3-216ENST00000550391 PRR5LQ6MZQ0 368 aa17.52■□□□□ 0.4
CACNB3-216ENST00000550391 CNBD1Q8NA66 436 aa17.52■□□□□ 0.4
CACNB3-216ENST00000550391 MMP10P09238 476 aa17.51■□□□□ 0.39
CACNB3-216ENST00000550391 NOP58Q9Y2X3 529 aaKnown RBP17.51■□□□□ 0.39
CACNB3-216ENST00000550391 CHMP3Q9Y3E7 222 aa17.51■□□□□ 0.39
CACNB3-216ENST00000550391 TNRC6CQ9HCJ0 1690 aaKnown RBP17.51■□□□□ 0.39
CACNB3-216ENST00000550391 NPHP1O15259 732 aa17.5■□□□□ 0.39
CACNB3-216ENST00000550391 SF3B3Q15393 1217 aaKnown RBP17.5■□□□□ 0.39
CACNB3-216ENST00000550391 COPRSQ9NQ92 184 aa17.5■□□□□ 0.39
CACNB3-216ENST00000550391 PARP3Q9Y6F1 533 aa17.5■□□□□ 0.39
CACNB3-216ENST00000550391 SURF6O75683 361 aaKnown RBP17.49■□□□□ 0.39
CACNB3-216ENST00000550391 ST5P78524 1137 aa17.49■□□□□ 0.39
CACNB3-216ENST00000550391 PTPN12Q05209 780 aaKnown RBP17.49■□□□□ 0.39
CACNB3-216ENST00000550391 FAM161AQ3B820 660 aa17.49■□□□□ 0.39
CACNB3-216ENST00000550391 HSP90AB4PQ58FF6 505 aa17.49■□□□□ 0.39
CACNB3-216ENST00000550391 C3orf67Q6ZVT6 689 aa17.49■□□□□ 0.39
CACNB3-216ENST00000550391 CCDC24Q8N4L8 307 aa17.49■□□□□ 0.39
CACNB3-216ENST00000550391 CCDC85AQ96PX6 553 aaPredicted RBP17.49■□□□□ 0.39
CACNB3-216ENST00000550391 GREM2Q9H772 168 aa17.49■□□□□ 0.39
CACNB3-216ENST00000550391 PA2G4Q9UQ80 394 aaKnown RBP17.49■□□□□ 0.39
CACNB3-216ENST00000550391 EXOC6BQ9Y2D4 811 aa17.49■□□□□ 0.39
CACNB3-216ENST00000550391 RTL9Q8NET4 1388 aa17.49■□□□□ 0.39
CACNB3-216ENST00000550391 RAB11FIP3O75154 756 aa17.48■□□□□ 0.39
CACNB3-216ENST00000550391 IFIT5Q13325 482 aaKnown RBP17.48■□□□□ 0.39
CACNB3-216ENST00000550391 CCDC57Q2TAC2 916 aa17.48■□□□□ 0.39
CACNB3-216ENST00000550391 CCDC152Q4G0S7 254 aa17.48■□□□□ 0.39
CACNB3-216ENST00000550391 KLHDC4Q8TBB5 520 aa17.48■□□□□ 0.39
CACNB3-216ENST00000550391 NLRP3Q96P20 1036 aa17.48■□□□□ 0.39
CACNB3-216ENST00000550391 ANKRD18BA2A2Z9 1011 aa17.47■□□□□ 0.39
CACNB3-216ENST00000550391 ITGA6P23229 1130 aa17.47■□□□□ 0.39
CACNB3-216ENST00000550391 NUCB1Q02818 461 aa17.47■□□□□ 0.39
CACNB3-216ENST00000550391 PDZRN3Q9UPQ7 1066 aa17.47■□□□□ 0.39
CACNB3-216ENST00000550391 ANKRD31Q8N7Z5 1873 aa17.47■□□□□ 0.39
CACNB3-216ENST00000550391 ANKRD45Q5TZF3 282 aa17.46■□□□□ 0.39
CACNB3-216ENST00000550391 ZBTB47Q9UFB7 747 aaPredicted RBP17.46■□□□□ 0.39
CACNB3-216ENST00000550391 G3BP1Q13283 466 aaKnown RBP eCLIP17.45■□□□□ 0.38
CACNB3-216ENST00000550391 TAF7LQ5H9L4 462 aa17.45■□□□□ 0.38
CACNB3-216ENST00000550391 CHD1LQ86WJ1 897 aa17.45■□□□□ 0.38
CACNB3-216ENST00000550391 ERC1Q8IUD2 1116 aa17.45■□□□□ 0.38
CACNB3-216ENST00000550391 SMC1BQ8NDV3 1235 aa17.45■□□□□ 0.38
CACNB3-216ENST00000550391 ZNF594Q96JF6 807 aaPredicted RBP17.45■□□□□ 0.38
CACNB3-216ENST00000550391 FBXO3Q9UK99 471 aa17.45■□□□□ 0.38
CACNB3-216ENST00000550391 KLRG2A4D1S0 409 aaPredicted RBP17.44■□□□□ 0.38
CACNB3-216ENST00000550391 APBB1O00213 710 aa17.44■□□□□ 0.38
CACNB3-216ENST00000550391 OS9Q13438 667 aaPredicted RBP17.44■□□□□ 0.38
CACNB3-216ENST00000550391 BRIP1Q9BX63 1249 aa17.44■□□□□ 0.38
CACNB3-216ENST00000550391 LRRCC1Q9C099 1032 aa17.44■□□□□ 0.38
CACNB3-216ENST00000550391 SIL1Q9H173 461 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms