RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 UBE3BQ7Z3V4 1068 aa14.31□□□□□ -0.12
RAB5B-208ENST00000550283 LINS1Q8NG48 757 aa14.31□□□□□ -0.12
RAB5B-208ENST00000550283 CRAMP1Q96RY5 1269 aa14.31□□□□□ -0.12
RAB5B-208ENST00000550283 CHMP4AQ9BY43 222 aa14.31□□□□□ -0.12
RAB5B-208ENST00000550283 SMC4Q9NTJ3 1288 aa14.31□□□□□ -0.12
RAB5B-208ENST00000550283 SLC4A10Q6U841 1118 aa14.3□□□□□ -0.12
RAB5B-208ENST00000550283 NOB1Q9ULX3 412 aaKnown RBP14.3□□□□□ -0.12
RAB5B-208ENST00000550283 PPEF1O14829 653 aaPredicted RBP14.29□□□□□ -0.12
RAB5B-208ENST00000550283 ALDH1L2Q3SY69 923 aa14.29□□□□□ -0.12
RAB5B-208ENST00000550283 RBM17Q96I25 401 aaKnown RBP14.29□□□□□ -0.12
RAB5B-208ENST00000550283 RNF181Q9P0P0 153 aa14.29□□□□□ -0.12
RAB5B-208ENST00000550283 CDHR2Q9BYE9 1310 aa14.29□□□□□ -0.12
RAB5B-208ENST00000550283 WTIPA6NIX2 430 aaPredicted RBP14.28□□□□□ -0.12
RAB5B-208ENST00000550283 ALDH1B1P30837 517 aa14.28□□□□□ -0.12
RAB5B-208ENST00000550283 NEXNQ0ZGT2 675 aa14.28□□□□□ -0.12
RAB5B-208ENST00000550283 ZNF526Q8TF50 670 aaPredicted RBP14.28□□□□□ -0.12
RAB5B-208ENST00000550283 KAZALD1Q96I82 304 aa14.28□□□□□ -0.12
RAB5B-208ENST00000550283 DUOX1Q9NRD9 1551 aa14.28□□□□□ -0.12
RAB5B-208ENST00000550283 ZNF277Q9NRM2 450 aaPredicted RBP14.28□□□□□ -0.12
RAB5B-208ENST00000550283 PDE8AO60658 829 aa14.27□□□□□ -0.13
RAB5B-208ENST00000550283 CTSWP56202 376 aa14.27□□□□□ -0.13
RAB5B-208ENST00000550283 FOXO4P98177 505 aa14.27□□□□□ -0.13
RAB5B-208ENST00000550283 GRAPQ13588 217 aa14.27□□□□□ -0.13
RAB5B-208ENST00000550283 CCDC93Q567U6 631 aa14.27□□□□□ -0.13
RAB5B-208ENST00000550283 TTLL11Q8NHH1 800 aa14.27□□□□□ -0.13
RAB5B-208ENST00000550283 GRAPLQ8TC17 118 aaPredicted RBP14.27□□□□□ -0.13
RAB5B-208ENST00000550283 GREM2Q9H772 168 aa14.27□□□□□ -0.13
RAB5B-208ENST00000550283 CCDC88AQ3V6T2 1871 aa14.27□□□□□ -0.13
RAB5B-208ENST00000550283 LTBP3Q9NS15 1303 aa14.26□□□□□ -0.13
RAB5B-208ENST00000550283 NBPF7P0C2Y1 421 aaPredicted RBP14.26□□□□□ -0.13
RAB5B-208ENST00000550283 LMNB1P20700 586 aa14.26□□□□□ -0.13
RAB5B-208ENST00000550283 DDX46Q7L014 1031 aaKnown RBP14.26□□□□□ -0.13
RAB5B-208ENST00000550283 ATP6V0A2Q9Y487 856 aa14.26□□□□□ -0.13
RAB5B-208ENST00000550283 LRRC37AA6NMS7 1700 aa14.26□□□□□ -0.13
RAB5B-208ENST00000550283 TIAM2Q8IVF5 1701 aa14.26□□□□□ -0.13
RAB5B-208ENST00000550283 PTPRCP08575 1304 aa14.25□□□□□ -0.13
RAB5B-208ENST00000550283 CT47B1P0C2W7 299 aaPredicted RBP14.25□□□□□ -0.13
RAB5B-208ENST00000550283 BRPF1P55201 1214 aaPredicted RBP14.25□□□□□ -0.13
RAB5B-208ENST00000550283 FKBP4Q02790 459 aaKnown RBP eCLIP14.25□□□□□ -0.13
RAB5B-208ENST00000550283 FAM161AQ3B820 660 aa14.25□□□□□ -0.13
RAB5B-208ENST00000550283 SUCLG2Q96I99 432 aa14.25□□□□□ -0.13
RAB5B-208ENST00000550283 GPR101Q96P66 508 aaPredicted RBP14.25□□□□□ -0.13
RAB5B-208ENST00000550283 SRCIN1Q9C0H9 1055 aa14.25□□□□□ -0.13
RAB5B-208ENST00000550283 TAOK3Q9H2K8 898 aa14.25□□□□□ -0.13
RAB5B-208ENST00000550283 LTBP1Q14766 1721 aa14.24□□□□□ -0.13
RAB5B-208ENST00000550283 GRM8O00222 908 aa14.24□□□□□ -0.13
RAB5B-208ENST00000550283 CSF1RP07333 972 aa14.24□□□□□ -0.13
RAB5B-208ENST00000550283 PLA2G12BQ9BX93 195 aa14.24□□□□□ -0.13
RAB5B-208ENST00000550283 ALDH1L1O75891 902 aa14.23□□□□□ -0.13
RAB5B-208ENST00000550283 BBOX1O75936 387 aa14.23□□□□□ -0.13
RAB5B-208ENST00000550283 GPSM2P81274 684 aa14.23□□□□□ -0.13
RAB5B-208ENST00000550283 SP8Q8IXZ3 490 aa14.23□□□□□ -0.13
RAB5B-208ENST00000550283 USP44Q9H0E7 712 aa14.23□□□□□ -0.13
RAB5B-208ENST00000550283 NMRK2Q9NPI5 230 aa14.23□□□□□ -0.13
RAB5B-208ENST00000550283 SPEF2Q9C093 1822 aa14.22□□□□□ -0.13
RAB5B-208ENST00000550283 UTYO14607 1347 aa14.22□□□□□ -0.13
RAB5B-208ENST00000550283 TRIM27P14373 513 aa14.22□□□□□ -0.13
RAB5B-208ENST00000550283 RPS8P62241 208 aaKnown RBP14.22□□□□□ -0.13
RAB5B-208ENST00000550283 ANKRD44Q8N8A2 993 aa14.22□□□□□ -0.13
RAB5B-208ENST00000550283 MYH3P11055 1940 aa14.21□□□□□ -0.13
RAB5B-208ENST00000550283 ZNF541Q9H0D2 1346 aa14.21□□□□□ -0.13
RAB5B-208ENST00000550283 IARSP41252 1262 aaKnown RBP14.21□□□□□ -0.13
RAB5B-208ENST00000550283 CCDC152Q4G0S7 254 aa14.21□□□□□ -0.13
RAB5B-208ENST00000550283 LMBR1LQ6UX01 489 aa14.21□□□□□ -0.13
RAB5B-208ENST00000550283 RTKN2Q8IZC4 609 aa14.21□□□□□ -0.13
RAB5B-208ENST00000550283 FRAT1Q92837 279 aaPredicted RBP14.21□□□□□ -0.13
RAB5B-208ENST00000550283 ZNF594Q96JF6 807 aaPredicted RBP14.21□□□□□ -0.13
RAB5B-208ENST00000550283 YTHDC1Q96MU7 727 aaKnown RBP14.21□□□□□ -0.13
RAB5B-208ENST00000550283 PSMD1Q99460 953 aa14.21□□□□□ -0.13
RAB5B-208ENST00000550283 POLLQ9UGP5 575 aa14.21□□□□□ -0.13
RAB5B-208ENST00000550283 DICER1Q9UPY3 1922 aaKnown RBP14.21□□□□□ -0.14
RAB5B-208ENST00000550283 RTL9Q8NET4 1388 aa14.21□□□□□ -0.14
RAB5B-208ENST00000550283 POTECB2RU33 542 aa14.2□□□□□ -0.14
RAB5B-208ENST00000550283 RLBP1P12271 317 aa14.2□□□□□ -0.14
RAB5B-208ENST00000550283 ITGA6P23229 1130 aa14.2□□□□□ -0.14
RAB5B-208ENST00000550283 AOC3Q16853 763 aa14.2□□□□□ -0.14
RAB5B-208ENST00000550283 SOGA3Q5TF21 947 aa14.2□□□□□ -0.14
RAB5B-208ENST00000550283 CLUAP1Q96AJ1 413 aa14.2□□□□□ -0.14
RAB5B-208ENST00000550283 RTFDC1Q9BY42 306 aaPredicted RBP14.2□□□□□ -0.14
RAB5B-208ENST00000550283 BICC1Q9H694 974 aaKnown RBP14.2□□□□□ -0.14
RAB5B-208ENST00000550283 C9orf78Q9NZ63 289 aaPredicted RBP14.2□□□□□ -0.14
RAB5B-208ENST00000550283 SNAP23O00161 211 aa14.19□□□□□ -0.14
RAB5B-208ENST00000550283 KIF3CO14782 793 aa14.19□□□□□ -0.14
RAB5B-208ENST00000550283 HSPA6P17066 643 aa14.19□□□□□ -0.14
RAB5B-208ENST00000550283 MPNDQ8N594 471 aa14.19□□□□□ -0.14
RAB5B-208ENST00000550283 MEIS3Q99687 375 aa14.19□□□□□ -0.14
RAB5B-208ENST00000550283 DDNO94850 711 aaPredicted RBP14.18□□□□□ -0.14
RAB5B-208ENST00000550283 CC2D2BQ6DHV5 1058 aa14.18□□□□□ -0.14
RAB5B-208ENST00000550283 DPP8Q6V1X1 898 aaPredicted RBP14.18□□□□□ -0.14
RAB5B-208ENST00000550283 API5Q9BZZ5 524 aaKnown RBP14.18□□□□□ -0.14
RAB5B-208ENST00000550283 MINPP1Q9UNW1 487 aa14.18□□□□□ -0.14
RAB5B-208ENST00000550283 NSFL1CQ9UNZ2 370 aaKnown RBP14.18□□□□□ -0.14
RAB5B-208ENST00000550283 KIF16BQ96L93 1317 aa14.17□□□□□ -0.14
RAB5B-208ENST00000550283 SLC34A2O95436 690 aa14.17□□□□□ -0.14
RAB5B-208ENST00000550283 KLRK1P26718 216 aa14.17□□□□□ -0.14
RAB5B-208ENST00000550283 INTS3Q68E01 1043 aaKnown RBP14.17□□□□□ -0.14
RAB5B-208ENST00000550283 ATF7IPQ6VMQ6 1270 aa14.17□□□□□ -0.14
RAB5B-208ENST00000550283 ANKRD18AQ8IVF6 992 aa14.17□□□□□ -0.14
RAB5B-208ENST00000550283 TMEM57Q8N5G2 664 aa14.17□□□□□ -0.14
RAB5B-208ENST00000550283 TBC1D16Q8TBP0 767 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms