RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 GRAPLQ8TC17 118 aaPredicted RBP17.34■□□□□ 0.37
NUP188-211ENST00000550219 HYPKQ9NX55 129 aa17.34■□□□□ 0.37
NUP188-211ENST00000550219 TMEM88BA6NKF7 163 aa17.33■□□□□ 0.36
NUP188-211ENST00000550219 CNTROBQ8N137 903 aa17.33■□□□□ 0.36
NUP188-211ENST00000550219 MPNDQ8N594 471 aa17.33■□□□□ 0.36
NUP188-211ENST00000550219 FAM89AQ96GI7 184 aa17.33■□□□□ 0.36
NUP188-211ENST00000550219 IFT57Q9NWB7 429 aa17.33■□□□□ 0.36
NUP188-211ENST00000550219 TAF1P21675 1872 aa17.33■□□□□ 0.36
NUP188-211ENST00000550219 DUOX1Q9NRD9 1551 aa17.32■□□□□ 0.36
NUP188-211ENST00000550219 BBOX1O75936 387 aa17.32■□□□□ 0.36
NUP188-211ENST00000550219 ITGBL1O95965 494 aaPredicted RBP17.32■□□□□ 0.36
NUP188-211ENST00000550219 EPS15P42566 896 aa17.32■□□□□ 0.36
NUP188-211ENST00000550219 CALD1Q05682 793 aaKnown RBP17.32■□□□□ 0.36
NUP188-211ENST00000550219 GOLGA2Q08379 1002 aa17.32■□□□□ 0.36
NUP188-211ENST00000550219 SP8Q8IXZ3 490 aa17.32■□□□□ 0.36
NUP188-211ENST00000550219 ISCA1Q9BUE6 129 aa17.32■□□□□ 0.36
NUP188-211ENST00000550219 LRRC37AA6NMS7 1700 aa17.32■□□□□ 0.36
NUP188-211ENST00000550219 ZNF853P0CG23 659 aa17.31■□□□□ 0.36
NUP188-211ENST00000550219 GNAI1P63096 354 aa17.31■□□□□ 0.36
NUP188-211ENST00000550219 RIC3Q7Z5B4 369 aa17.31■□□□□ 0.36
NUP188-211ENST00000550219 COL4A1P02462 1669 aa17.3■□□□□ 0.36
NUP188-211ENST00000550219 NCBP3Q53F19 620 aaKnown RBP17.3■□□□□ 0.36
NUP188-211ENST00000550219 TNS4Q8IZW8 715 aa17.3■□□□□ 0.36
NUP188-211ENST00000550219 RTFDC1Q9BY42 306 aaPredicted RBP17.3■□□□□ 0.36
NUP188-211ENST00000550219 PHAXQ9H814 394 aaKnown RBP17.3■□□□□ 0.36
NUP188-211ENST00000550219 ZNRF3Q9ULT6 936 aa17.3■□□□□ 0.36
NUP188-211ENST00000550219 CAPN15O75808 1086 aa17.29■□□□□ 0.36
NUP188-211ENST00000550219 CXCL9Q07325 125 aa17.29■□□□□ 0.36
NUP188-211ENST00000550219 KIAA2012Q0VF49 1180 aa17.29■□□□□ 0.36
NUP188-211ENST00000550219 CELF1Q92879 486 aaKnown RBP17.29■□□□□ 0.36
NUP188-211ENST00000550219 MYD88Q99836 296 aa17.29■□□□□ 0.36
NUP188-211ENST00000550219 ABT1Q9ULW3 272 aaKnown RBP17.29■□□□□ 0.36
NUP188-211ENST00000550219 IRS4O14654 1257 aaPredicted RBP17.28■□□□□ 0.36
NUP188-211ENST00000550219 RAD17O75943 681 aa17.28■□□□□ 0.36
NUP188-211ENST00000550219 GMPSP49915 693 aaPredicted RBP17.28■□□□□ 0.36
NUP188-211ENST00000550219 CIAPIN1Q6FI81 312 aa17.28■□□□□ 0.36
NUP188-211ENST00000550219 BCL2L13Q9BXK5 485 aa17.28■□□□□ 0.36
NUP188-211ENST00000550219 VPS33BQ9H267 617 aa17.28■□□□□ 0.36
NUP188-211ENST00000550219 GPRC5DQ9NZD1 345 aa17.28■□□□□ 0.36
NUP188-211ENST00000550219 VEGFBP49765 207 aa17.27■□□□□ 0.36
NUP188-211ENST00000550219 FMR1Q06787 632 aaKnown RBP eCLIP17.27■□□□□ 0.362e-7■■■□□ 14.9
NUP188-211ENST00000550219 USP50Q70EL3 339 aaPredicted RBP17.27■□□□□ 0.36
NUP188-211ENST00000550219 TMC4Q7Z404 712 aa17.27■□□□□ 0.36
NUP188-211ENST00000550219 C8orf58Q8NAV2 365 aa17.27■□□□□ 0.36
NUP188-211ENST00000550219 SF3B3Q15393 1217 aaKnown RBP17.26■□□□□ 0.35
NUP188-211ENST00000550219 PAXIP1Q6ZW49 1069 aaPredicted RBP17.26■□□□□ 0.35
NUP188-211ENST00000550219 ADARB2Q9NS39 739 aaKnown RBP17.26■□□□□ 0.35
NUP188-211ENST00000550219 NSFL1CQ9UNZ2 370 aaKnown RBP17.26■□□□□ 0.35
NUP188-211ENST00000550219 C6orf229H3BNL8 230 aa17.25■□□□□ 0.35
NUP188-211ENST00000550219 TRAF5O00463 557 aa17.25■□□□□ 0.35
NUP188-211ENST00000550219 RIMBP2O15034 1052 aa17.25■□□□□ 0.35
NUP188-211ENST00000550219 JARID2Q92833 1246 aaPredicted RBP17.25■□□□□ 0.35
NUP188-211ENST00000550219 TSR2Q969E8 191 aaKnown RBP17.25■□□□□ 0.35
NUP188-211ENST00000550219 YDJCA8MPS7 323 aa17.24■□□□□ 0.35
NUP188-211ENST00000550219 FOXN1O15353 648 aa17.24■□□□□ 0.35
NUP188-211ENST00000550219 GPSM2P81274 684 aa17.24■□□□□ 0.35
NUP188-211ENST00000550219 GRM1Q13255 1194 aa17.24■□□□□ 0.35
NUP188-211ENST00000550219 CCDC27Q2M243 656 aa17.24■□□□□ 0.35
NUP188-211ENST00000550219 CCDC30Q5VVM6 783 aa17.24■□□□□ 0.35
NUP188-211ENST00000550219 TSPYL6Q8N831 410 aa17.24■□□□□ 0.35
NUP188-211ENST00000550219 ZBTB38Q8NAP3 1195 aaPredicted RBP17.24■□□□□ 0.35
NUP188-211ENST00000550219 AIDAQ96BJ3 306 aa17.24■□□□□ 0.35
NUP188-211ENST00000550219 GPR101Q96P66 508 aaPredicted RBP17.24■□□□□ 0.35
NUP188-211ENST00000550219 CCDC85AQ96PX6 553 aaPredicted RBP17.24■□□□□ 0.35
NUP188-211ENST00000550219 DBNDD1Q9H9R9 158 aa17.24■□□□□ 0.35
NUP188-211ENST00000550219 RASSF10A6NK89 507 aa17.23■□□□□ 0.35
NUP188-211ENST00000550219 DDX58O95786 925 aaKnown RBP17.23■□□□□ 0.35
NUP188-211ENST00000550219 TRIM28Q13263 835 aaKnown RBP17.23■□□□□ 0.35
NUP188-211ENST00000550219 TNIP1Q15025 636 aa17.23■□□□□ 0.35
NUP188-211ENST00000550219 WASHC4Q2M389 1173 aa17.23■□□□□ 0.35
NUP188-211ENST00000550219 DEFB115Q30KQ5 88 aa17.23■□□□□ 0.35
NUP188-211ENST00000550219 CDHR2Q9BYE9 1310 aa17.22■□□□□ 0.35
NUP188-211ENST00000550219 SHTN1A0MZ66 631 aa17.22■□□□□ 0.35
NUP188-211ENST00000550219 TRPM4Q8TD43 1214 aa17.22■□□□□ 0.35
NUP188-211ENST00000550219 SEC31BQ9NQW1 1179 aa17.22■□□□□ 0.35
NUP188-211ENST00000550219 CWC25Q9NXE8 425 aaPredicted RBP17.22■□□□□ 0.35
NUP188-211ENST00000550219 MAP3K2Q9Y2U5 619 aa17.22■□□□□ 0.35
NUP188-211ENST00000550219 ZBTB12Q9Y330 459 aaPredicted RBP17.22■□□□□ 0.35
NUP188-211ENST00000550219 HNRNPUQ00839 825 aaKnown RBP eCLIP17.21■□□□□ 0.35
NUP188-211ENST00000550219 DOK7Q18PE1 504 aa17.21■□□□□ 0.35
NUP188-211ENST00000550219 CCDC191Q8NCU4 936 aa17.21■□□□□ 0.35
NUP188-211ENST00000550219 EYA3Q99504 573 aa17.21■□□□□ 0.35
NUP188-211ENST00000550219 METTL22Q9BUU2 404 aaPredicted RBP17.21■□□□□ 0.35
NUP188-211ENST00000550219 ZNF408Q9H9D4 720 aa17.21■□□□□ 0.35
NUP188-211ENST00000550219 POLLQ9UGP5 575 aa17.21■□□□□ 0.35
NUP188-211ENST00000550219 WDR33Q9C0J8 1336 aaKnown RBP17.21■□□□□ 0.34
NUP188-211ENST00000550219 PSMD14O00487 310 aa17.2■□□□□ 0.34
NUP188-211ENST00000550219 ECE2O60344 883 aa17.2■□□□□ 0.34
NUP188-211ENST00000550219 PCCAP05165 728 aaPredicted RBP17.2■□□□□ 0.34
NUP188-211ENST00000550219 HSP90B1P14625 803 aaKnown RBP17.2■□□□□ 0.34
NUP188-211ENST00000550219 RPS8P62241 208 aaKnown RBP17.2■□□□□ 0.34
NUP188-211ENST00000550219 CCDC152Q4G0S7 254 aa17.2■□□□□ 0.34
NUP188-211ENST00000550219 MICALL2Q8IY33 904 aa17.2■□□□□ 0.34
NUP188-211ENST00000550219 STK31Q9BXU1 1019 aa17.2■□□□□ 0.34
NUP188-211ENST00000550219 GLIS2Q9BZE0 524 aaPredicted RBP17.2■□□□□ 0.34
NUP188-211ENST00000550219 CNOT7Q9UIV1 285 aaKnown RBP17.2■□□□□ 0.34
NUP188-211ENST00000550219 TRPM7Q96QT4 1865 aa17.2■□□□□ 0.34
NUP188-211ENST00000550219 ZNF521Q96K83 1311 aa17.2■□□□□ 0.34
NUP188-211ENST00000550219 PDE8AO60658 829 aa17.19■□□□□ 0.34
NUP188-211ENST00000550219 UFL1O94874 794 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms