RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 LAS1LQ9Y4W2 734 aaKnown RBP20.16■□□□□ 0.82
RAB5C-205ENST00000550013 SH3TC1Q8TE82 1336 aa20.16■□□□□ 0.82
RAB5C-205ENST00000550013 HSPA8P11142 646 aaKnown RBP20.15■□□□□ 0.82
RAB5C-205ENST00000550013 CST9Q5W186 159 aa20.15■□□□□ 0.82
RAB5C-205ENST00000550013 DDX46Q7L014 1031 aaKnown RBP20.15■□□□□ 0.82
RAB5C-205ENST00000550013 ADARB2Q9NS39 739 aaKnown RBP20.15■□□□□ 0.82
RAB5C-205ENST00000550013 TRIM35Q9UPQ4 493 aa20.15■□□□□ 0.82
RAB5C-205ENST00000550013 THSD7BQ9C0I4 1608 aa20.15■□□□□ 0.82
RAB5C-205ENST00000550013 DUOX1Q9NRD9 1551 aa20.14■□□□□ 0.81
RAB5C-205ENST00000550013 MYBBP1AQ9BQG0 1328 aaKnown RBP20.14■□□□□ 0.81
RAB5C-205ENST00000550013 KIAA2012Q0VF49 1180 aa20.14■□□□□ 0.81
RAB5C-205ENST00000550013 GRAPQ13588 217 aa20.14■□□□□ 0.81
RAB5C-205ENST00000550013 PAXIP1Q6ZW49 1069 aaPredicted RBP20.14■□□□□ 0.81
RAB5C-205ENST00000550013 GRAPLQ8TC17 118 aaPredicted RBP20.14■□□□□ 0.81
RAB5C-205ENST00000550013 LRRC37AA6NMS7 1700 aa20.13■□□□□ 0.81
RAB5C-205ENST00000550013 RAD17O75943 681 aa20.13■□□□□ 0.81
RAB5C-205ENST00000550013 DDX10Q13206 875 aaKnown RBP20.13■□□□□ 0.81
RAB5C-205ENST00000550013 GRM1Q13255 1194 aa20.13■□□□□ 0.81
RAB5C-205ENST00000550013 CIAPIN1Q6FI81 312 aa20.13■□□□□ 0.81
RAB5C-205ENST00000550013 CYP4F22Q6NT55 531 aa20.13■□□□□ 0.81
RAB5C-205ENST00000550013 CAPNS2Q96L46 248 aa20.13■□□□□ 0.81
RAB5C-205ENST00000550013 MAP2K1Q02750 393 aaPredicted RBP20.12■□□□□ 0.81
RAB5C-205ENST00000550013 HDGFL1Q5TGJ6 251 aa20.12■□□□□ 0.81
RAB5C-205ENST00000550013 RUNDC1Q96C34 613 aa20.12■□□□□ 0.81
RAB5C-205ENST00000550013 COL4A1P02462 1669 aa20.11■□□□□ 0.81
RAB5C-205ENST00000550013 PLBD2Q8NHP8 589 aa20.11■□□□□ 0.81
RAB5C-205ENST00000550013 YDJCA8MPS7 323 aa20.1■□□□□ 0.81
RAB5C-205ENST00000550013 ATP5J2-PTCD1G3V325 749 aa20.1■□□□□ 0.81
RAB5C-205ENST00000550013 WDR43Q15061 677 aaKnown RBP eCLIP20.1■□□□□ 0.81
RAB5C-205ENST00000550013 ISCA1Q9BUE6 129 aa20.1■□□□□ 0.81
RAB5C-205ENST00000550013 BCL2L13Q9BXK5 485 aa20.1■□□□□ 0.81
RAB5C-205ENST00000550013 GLIS2Q9BZE0 524 aaPredicted RBP20.1■□□□□ 0.81
RAB5C-205ENST00000550013 TLL2Q9Y6L7 1015 aa20.1■□□□□ 0.81
RAB5C-205ENST00000550013 SHTN1A0MZ66 631 aa20.09■□□□□ 0.81
RAB5C-205ENST00000550013 ECE1P42892 770 aa20.09■□□□□ 0.81
RAB5C-205ENST00000550013 HIRAP54198 1017 aaPredicted RBP20.09■□□□□ 0.81
RAB5C-205ENST00000550013 TNIP1Q15025 636 aa20.09■□□□□ 0.81
RAB5C-205ENST00000550013 ANKRD13DQ6ZTN6 518 aa20.09■□□□□ 0.81
RAB5C-205ENST00000550013 TRPM4Q8TD43 1214 aa20.09■□□□□ 0.81
RAB5C-205ENST00000550013 FAM89AQ96GI7 184 aa20.09■□□□□ 0.81
RAB5C-205ENST00000550013 GPR101Q96P66 508 aaPredicted RBP20.09■□□□□ 0.81
RAB5C-205ENST00000550013 ADAMTS8Q9UP79 889 aa20.09■□□□□ 0.81
RAB5C-205ENST00000550013 CDHR2Q9BYE9 1310 aa20.08■□□□□ 0.81
RAB5C-205ENST00000550013 AOC2O75106 756 aa20.08■□□□□ 0.81
RAB5C-205ENST00000550013 CELF2O95319 508 aaKnown RBP20.08■□□□□ 0.81
RAB5C-205ENST00000550013 TMC4Q7Z404 712 aa20.08■□□□□ 0.81
RAB5C-205ENST00000550013 CELF1Q92879 486 aaKnown RBP20.08■□□□□ 0.81
RAB5C-205ENST00000550013 DBF4Q9UBU7 674 aaPredicted RBP20.08■□□□□ 0.81
RAB5C-205ENST00000550013 PGAP2Q9UHJ9 254 aa20.08■□□□□ 0.81
RAB5C-205ENST00000550013 HOXB7P09629 217 aa20.07■□□□□ 0.8
RAB5C-205ENST00000550013 RTL5Q5HYW3 569 aaPredicted RBP20.07■□□□□ 0.8
RAB5C-205ENST00000550013 SF3B3Q15393 1217 aaKnown RBP20.06■□□□□ 0.8
RAB5C-205ENST00000550013 DUSP27Q5VZP5 1158 aa20.06■□□□□ 0.8
RAB5C-205ENST00000550013 CNOT7Q9UIV1 285 aaKnown RBP20.06■□□□□ 0.8
RAB5C-205ENST00000550013 ZBTB12Q9Y330 459 aaPredicted RBP20.06■□□□□ 0.8
RAB5C-205ENST00000550013 SAPCD2Q86UD0 394 aa20.05■□□□□ 0.8
RAB5C-205ENST00000550013 CFAP44Q96MT7 982 aa20.05■□□□□ 0.8
RAB5C-205ENST00000550013 ZNF408Q9H9D4 720 aa20.05■□□□□ 0.8
RAB5C-205ENST00000550013 DBNDD1Q9H9R9 158 aa20.05■□□□□ 0.8
RAB5C-205ENST00000550013 MBIPQ9NS73 344 aa20.05■□□□□ 0.8
RAB5C-205ENST00000550013 NSFL1CQ9UNZ2 370 aaKnown RBP20.05■□□□□ 0.8
RAB5C-205ENST00000550013 RIMBP2O15034 1052 aa20.04■□□□□ 0.8
RAB5C-205ENST00000550013 GPSM2P81274 684 aa20.04■□□□□ 0.8
RAB5C-205ENST00000550013 WASHC4Q2M389 1173 aa20.04■□□□□ 0.8
RAB5C-205ENST00000550013 MICALL2Q8IY33 904 aa20.04■□□□□ 0.8
RAB5C-205ENST00000550013 ZC3H15Q8WU90 426 aaKnown RBP20.04■□□□□ 0.8
RAB5C-205ENST00000550013 BEGAINQ9BUH8 593 aa20.04■□□□□ 0.8
RAB5C-205ENST00000550013 HYPKQ9NX55 129 aa20.04■□□□□ 0.8
RAB5C-205ENST00000550013 POLLQ9UGP5 575 aa20.04■□□□□ 0.8
RAB5C-205ENST00000550013 TSKSQ9UJT2 592 aa20.04■□□□□ 0.8
RAB5C-205ENST00000550013 POLR2AP24928 1970 aaKnown RBP20.03■□□□□ 0.8
RAB5C-205ENST00000550013 C6orf229H3BNL8 230 aa20.03■□□□□ 0.8
RAB5C-205ENST00000550013 PSMD14O00487 310 aa20.03■□□□□ 0.8
RAB5C-205ENST00000550013 IRS4O14654 1257 aaPredicted RBP20.03■□□□□ 0.8
RAB5C-205ENST00000550013 ABHD8Q96I13 439 aa20.03■□□□□ 0.8
RAB5C-205ENST00000550013 H7C1D1 291 aa20.02■□□□□ 0.8
RAB5C-205ENST00000550013 MAP2K2P36507 400 aa20.02■□□□□ 0.8
RAB5C-205ENST00000550013 DLK2Q6UY11 383 aa20.02■□□□□ 0.8
RAB5C-205ENST00000550013 CDC37L1Q7L3B6 337 aa20.02■□□□□ 0.8
RAB5C-205ENST00000550013 USP48Q86UV5 1035 aa20.02■□□□□ 0.8
RAB5C-205ENST00000550013 SCN9AQ15858 1988 aa20.01■□□□□ 0.79
RAB5C-205ENST00000550013 ZNF853P0CG23 659 aa20.01■□□□□ 0.79
RAB5C-205ENST00000550013 TRIM28Q13263 835 aaKnown RBP20.01■□□□□ 0.79
RAB5C-205ENST00000550013 DOK7Q18PE1 504 aa20.01■□□□□ 0.79
RAB5C-205ENST00000550013 SAMD7Q7Z3H4 446 aa20.01■□□□□ 0.79
RAB5C-205ENST00000550013 KCNQ5Q9NR82 932 aa20.01■□□□□ 0.79
RAB5C-205ENST00000550013 ECE2O60344 883 aa20■□□□□ 0.79
RAB5C-205ENST00000550013 EGFRP00533 1210 aa20■□□□□ 0.79
RAB5C-205ENST00000550013 TBC1D10BQ4KMP7 808 aaPredicted RBP20■□□□□ 0.79
RAB5C-205ENST00000550013 DPF2Q92785 391 aa20■□□□□ 0.79
RAB5C-205ENST00000550013 HHIPL1Q96JK4 782 aa20■□□□□ 0.79
RAB5C-205ENST00000550013 PHAXQ9H814 394 aaKnown RBP20■□□□□ 0.79
RAB5C-205ENST00000550013 RTL9Q8NET4 1388 aa19.99■□□□□ 0.79
RAB5C-205ENST00000550013 ELL2O00472 640 aaPredicted RBP19.99■□□□□ 0.79
RAB5C-205ENST00000550013 RPS8P62241 208 aaKnown RBP19.99■□□□□ 0.79
RAB5C-205ENST00000550013 RIC3Q7Z5B4 369 aa19.99■□□□□ 0.79
RAB5C-205ENST00000550013 TBC1D16Q8TBP0 767 aa19.99■□□□□ 0.79
RAB5C-205ENST00000550013 SEC31BQ9NQW1 1179 aa19.99■□□□□ 0.79
RAB5C-205ENST00000550013 CASP8AP2Q9UKL3 1982 aa19.99■□□□□ 0.79
RAB5C-205ENST00000550013 APAF1O14727 1248 aa19.98■□□□□ 0.79
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