RNA–Protein interactions for RNA: ENST00000549678.1

PTCH1-219, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-219ENST00000549678 FZD9O00144 591 aa9.25□□□□□ -0.93
PTCH1-219ENST00000549678 IRS4O14654 1257 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-219ENST00000549678 DDNO94850 711 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-219ENST00000549678 HCLS1P14317 486 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-219ENST00000549678 SLFN5Q08AF3 891 aa9.25□□□□□ -0.93
PTCH1-219ENST00000549678 CHADLQ6NUI6 762 aa9.25□□□□□ -0.93
PTCH1-219ENST00000549678 SLC4A10Q6U841 1118 aa9.25□□□□□ -0.93
PTCH1-219ENST00000549678 DDX46Q7L014 1031 aaKnown RBP9.25□□□□□ -0.93
PTCH1-219ENST00000549678 LDHDQ86WU2 507 aa9.25□□□□□ -0.93
PTCH1-219ENST00000549678 SYNE4Q8N205 404 aa9.25□□□□□ -0.93
PTCH1-219ENST00000549678 CCDC191Q8NCU4 936 aa9.25□□□□□ -0.93
PTCH1-219ENST00000549678 FAM89AQ96GI7 184 aa9.25□□□□□ -0.93
PTCH1-219ENST00000549678 CDCA7LQ96GN5 454 aa9.25□□□□□ -0.93
PTCH1-219ENST00000549678 ZNF277Q9NRM2 450 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-219ENST00000549678 PPEF1O14829 653 aaPredicted RBP9.24□□□□□ -0.93
PTCH1-219ENST00000549678 BBOX1O75936 387 aa9.24□□□□□ -0.93
PTCH1-219ENST00000549678 HTRA3P83110 453 aa9.24□□□□□ -0.93
PTCH1-219ENST00000549678 IFFO2Q5TF58 517 aa9.24□□□□□ -0.93
PTCH1-219ENST00000549678 TMC4Q7Z404 712 aa9.24□□□□□ -0.93
PTCH1-219ENST00000549678 PNMA8AQ86V59 439 aaPredicted RBP9.24□□□□□ -0.93
PTCH1-219ENST00000549678 GPC2Q8N158 579 aa9.24□□□□□ -0.93
PTCH1-219ENST00000549678 DNAAF4Q8WXU2 420 aa9.24□□□□□ -0.93
PTCH1-219ENST00000549678 TAF1DQ9H5J8 278 aaPredicted RBP9.24□□□□□ -0.93
PTCH1-219ENST00000549678 SMC4Q9NTJ3 1288 aa9.24□□□□□ -0.93
PTCH1-219ENST00000549678 HACL1Q9UJ83 578 aa9.24□□□□□ -0.93
PTCH1-219ENST00000549678 EIF6P56537 245 aaKnown RBP9.23□□□□□ -0.93
PTCH1-219ENST00000549678 CWF19L2Q2TBE0 894 aaKnown RBP9.23□□□□□ -0.93
PTCH1-219ENST00000549678 ZBTB38Q8NAP3 1195 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-219ENST00000549678 SUPT20HQ8NEM7 779 aa9.23□□□□□ -0.93
PTCH1-219ENST00000549678 BCL2L13Q9BXK5 485 aa9.23□□□□□ -0.93
PTCH1-219ENST00000549678 CREBZFQ9NS37 354 aa9.23□□□□□ -0.93
PTCH1-219ENST00000549678 ATP6V0A2Q9Y487 856 aa9.23□□□□□ -0.93
PTCH1-219ENST00000549678 SPEF2Q9C093 1822 aa9.23□□□□□ -0.93
PTCH1-219ENST00000549678 TAF1P21675 1872 aa9.22□□□□□ -0.93
PTCH1-219ENST00000549678 F6X3S4 739 aa9.22□□□□□ -0.93
PTCH1-219ENST00000549678 PDE8AO60658 829 aa9.22□□□□□ -0.93
PTCH1-219ENST00000549678 PCCAP05165 728 aaPredicted RBP9.22□□□□□ -0.93
PTCH1-219ENST00000549678 TRIM28Q13263 835 aaKnown RBP9.22□□□□□ -0.93
PTCH1-219ENST00000549678 OLFM4Q6UX06 510 aa9.22□□□□□ -0.93
PTCH1-219ENST00000549678 LARGE2Q8N3Y3 721 aa9.22□□□□□ -0.93
PTCH1-219ENST00000549678 JARID2Q92833 1246 aaPredicted RBP9.22□□□□□ -0.93
PTCH1-219ENST00000549678 CCDC85AQ96PX6 553 aaPredicted RBP9.22□□□□□ -0.93
PTCH1-219ENST00000549678 RTFDC1Q9BY42 306 aaPredicted RBP9.22□□□□□ -0.93
PTCH1-219ENST00000549678 ABCC4O15439 1325 aa9.22□□□□□ -0.93
PTCH1-219ENST00000549678 ZNF541Q9H0D2 1346 aa9.22□□□□□ -0.93
PTCH1-219ENST00000549678 NEURL1BA8MQ27 555 aa9.21□□□□□ -0.94
PTCH1-219ENST00000549678 CT47B1P0C2W7 299 aaPredicted RBP9.21□□□□□ -0.94
PTCH1-219ENST00000549678 LMOD1P29536 600 aaPredicted RBP9.21□□□□□ -0.94
PTCH1-219ENST00000549678 EPHX2P34913 555 aa9.21□□□□□ -0.94
PTCH1-219ENST00000549678 GRAPQ13588 217 aa9.21□□□□□ -0.94
PTCH1-219ENST00000549678 ALDH1L2Q3SY69 923 aa9.21□□□□□ -0.94
PTCH1-219ENST00000549678 CCDC152Q4G0S7 254 aa9.21□□□□□ -0.94
PTCH1-219ENST00000549678 C3orf67Q6ZVT6 689 aa9.21□□□□□ -0.94
PTCH1-219ENST00000549678 UBE3BQ7Z3V4 1068 aa9.21□□□□□ -0.94
PTCH1-219ENST00000549678 SP8Q8IXZ3 490 aa9.21□□□□□ -0.94
PTCH1-219ENST00000549678 NIM1KQ8IY84 436 aa9.21□□□□□ -0.94
PTCH1-219ENST00000549678 LINS1Q8NG48 757 aa9.21□□□□□ -0.94
PTCH1-219ENST00000549678 GRAPLQ8TC17 118 aaPredicted RBP9.21□□□□□ -0.94
PTCH1-219ENST00000549678 C9orf78Q9NZ63 289 aaPredicted RBP9.21□□□□□ -0.94
PTCH1-219ENST00000549678 CHMP3Q9Y3E7 222 aa9.21□□□□□ -0.94
PTCH1-219ENST00000549678 PTPRCP08575 1304 aa9.21□□□□□ -0.94
PTCH1-219ENST00000549678 PASKQ96RG2 1323 aa9.21□□□□□ -0.94
PTCH1-219ENST00000549678 PPIP5K2O43314 1243 aa9.2□□□□□ -0.94
PTCH1-219ENST00000549678 IGKV5-2P06315 115 aa9.2□□□□□ -0.94
PTCH1-219ENST00000549678 SF3B3Q15393 1217 aaKnown RBP9.2□□□□□ -0.94
PTCH1-219ENST00000549678 MRPL50Q8N5N7 158 aaKnown RBP9.2□□□□□ -0.94
PTCH1-219ENST00000549678 SSH1Q8WYL5 1049 aa9.2□□□□□ -0.94
PTCH1-219ENST00000549678 SRCIN1Q9C0H9 1055 aa9.2□□□□□ -0.94
PTCH1-219ENST00000549678 CDHR2Q9BYE9 1310 aa9.2□□□□□ -0.94
PTCH1-219ENST00000549678 POTEIP0CG38 1075 aa9.19□□□□□ -0.94
PTCH1-219ENST00000549678 POTEJP0CG39 1038 aa9.19□□□□□ -0.94
PTCH1-219ENST00000549678 CTSWP56202 376 aa9.19□□□□□ -0.94
PTCH1-219ENST00000549678 GCKRQ14397 625 aa9.19□□□□□ -0.94
PTCH1-219ENST00000549678 EAPPQ56P03 285 aaPredicted RBP9.19□□□□□ -0.94
PTCH1-219ENST00000549678 DPP8Q6V1X1 898 aaPredicted RBP9.19□□□□□ -0.94
PTCH1-219ENST00000549678 USP50Q70EL3 339 aaPredicted RBP9.19□□□□□ -0.94
PTCH1-219ENST00000549678 MPNDQ8N594 471 aa9.19□□□□□ -0.94
PTCH1-219ENST00000549678 CDC5LQ99459 802 aaKnown RBP9.19□□□□□ -0.94
PTCH1-219ENST00000549678 ZNRF3Q9ULT6 936 aa9.19□□□□□ -0.94
PTCH1-219ENST00000549678 ZBED9Q6R2W3 1325 aa9.19□□□□□ -0.94
PTCH1-219ENST00000549678 KIF16BQ96L93 1317 aa9.19□□□□□ -0.94
PTCH1-219ENST00000549678 TMEM88BA6NKF7 163 aa9.18□□□□□ -0.94
PTCH1-219ENST00000549678 G3V3G9 751 aa9.18□□□□□ -0.94
PTCH1-219ENST00000549678 ITGBL1O95965 494 aaPredicted RBP9.18□□□□□ -0.94
PTCH1-219ENST00000549678 KIAA2012Q0VF49 1180 aa9.18□□□□□ -0.94
PTCH1-219ENST00000549678 TAF7LQ5H9L4 462 aa9.18□□□□□ -0.94
PTCH1-219ENST00000549678 DCAF8Q5TAQ9 597 aa9.18□□□□□ -0.94
PTCH1-219ENST00000549678 ANKRD18AQ8IVF6 992 aa9.18□□□□□ -0.94
PTCH1-219ENST00000549678 CLEC11AQ9Y240 323 aa9.18□□□□□ -0.94
PTCH1-219ENST00000549678 GJA3Q9Y6H8 435 aa9.18□□□□□ -0.94
PTCH1-219ENST00000549678 ADAMTSL1Q8N6G6 1762 aa9.17□□□□□ -0.94
PTCH1-219ENST00000549678 CNTNAP1P78357 1384 aa9.17□□□□□ -0.94
PTCH1-219ENST00000549678 C6orf229H3BNL8 230 aa9.17□□□□□ -0.94
PTCH1-219ENST00000549678 GRM8O00222 908 aa9.17□□□□□ -0.94
PTCH1-219ENST00000549678 ALDH1L1O75891 902 aa9.17□□□□□ -0.94
PTCH1-219ENST00000549678 IGHMBP2P38935 993 aaKnown RBP9.17□□□□□ -0.94
PTCH1-219ENST00000549678 SCNN1DP51172 638 aa9.17□□□□□ -0.94
PTCH1-219ENST00000549678 TNIP1Q15025 636 aa9.17□□□□□ -0.94
PTCH1-219ENST00000549678 BEND3Q5T5X7 828 aa9.17□□□□□ -0.94
PTCH1-219ENST00000549678 TRMT2AQ8IZ69 625 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms