RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 DNAJC5GQ8N7S2 189 aa31.03■■■□□ 2.56
USP44-205ENST00000549639 TAF1DQ9H5J8 278 aaPredicted RBP31.03■■■□□ 2.56
USP44-205ENST00000549639 HACL1Q9UJ83 578 aa31.03■■■□□ 2.56
USP44-205ENST00000549639 KSR2Q6VAB6 950 aa31.02■■■□□ 2.56
USP44-205ENST00000549639 NIM1KQ8IY84 436 aa31.02■■■□□ 2.56
USP44-205ENST00000549639 CWC25Q9NXE8 425 aaPredicted RBP31.02■■■□□ 2.56
USP44-205ENST00000549639 PPIP5K2O43314 1243 aa31.01■■■□□ 2.55
USP44-205ENST00000549639 PCCAP05165 728 aaPredicted RBP31■■■□□ 2.55
USP44-205ENST00000549639 LDHDQ86WU2 507 aa31■■■□□ 2.55
USP44-205ENST00000549639 ZNF428Q96B54 188 aa31■■■□□ 2.55
USP44-205ENST00000549639 MAP3K2Q9Y2U5 619 aa31■■■□□ 2.55
USP44-205ENST00000549639 FANCIQ9NVI1 1328 aa30.99■■■□□ 2.55
USP44-205ENST00000549639 RTL5Q5HYW3 569 aaPredicted RBP30.99■■■□□ 2.55
USP44-205ENST00000549639 PNMA8AQ86V59 439 aaPredicted RBP30.99■■■□□ 2.55
USP44-205ENST00000549639 FAM9BQ8IZU0 186 aa30.99■■■□□ 2.55
USP44-205ENST00000549639 COL4A5P29400 1685 aa30.98■■■□□ 2.55
USP44-205ENST00000549639 NEXNQ0ZGT2 675 aa30.98■■■□□ 2.55
USP44-205ENST00000549639 SLC51AQ86UW1 340 aa30.98■■■□□ 2.55
USP44-205ENST00000549639 PI4KAP2A4QPH2 592 aa30.97■■■□□ 2.55
USP44-205ENST00000549639 SLC4A2P04920 1241 aa30.97■■■□□ 2.55
USP44-205ENST00000549639 AOC3Q16853 763 aa30.97■■■□□ 2.55
USP44-205ENST00000549639 PI4KAP1Q8N8J0 262 aa30.97■■■□□ 2.55
USP44-205ENST00000549639 SALL2Q9Y467 1007 aaPredicted RBP30.97■■■□□ 2.55
USP44-205ENST00000549639 EPHX2P34913 555 aa30.96■■■□□ 2.55
USP44-205ENST00000549639 KIAA2012Q0VF49 1180 aa30.95■■■□□ 2.55
USP44-205ENST00000549639 CELF1Q92879 486 aaKnown RBP30.95■■■□□ 2.55
USP44-205ENST00000549639 KLRG1Q96E93 195 aa30.95■■■□□ 2.55
USP44-205ENST00000549639 ZNRF3Q9ULT6 936 aa30.95■■■□□ 2.55
USP44-205ENST00000549639 GJA3Q9Y6H8 435 aa30.95■■■□□ 2.55
USP44-205ENST00000549639 LRRC37AA6NMS7 1700 aa30.95■■■□□ 2.54
USP44-205ENST00000549639 PDE8AO60658 829 aa30.94■■■□□ 2.54
USP44-205ENST00000549639 LMOD1P29536 600 aaPredicted RBP30.94■■■□□ 2.54
USP44-205ENST00000549639 POTEIP0CG38 1075 aa30.93■■■□□ 2.54
USP44-205ENST00000549639 POTEJP0CG39 1038 aa30.93■■■□□ 2.54
USP44-205ENST00000549639 RPS8P62241 208 aaKnown RBP30.93■■■□□ 2.54
USP44-205ENST00000549639 CCDC152Q4G0S7 254 aa30.93■■■□□ 2.54
USP44-205ENST00000549639 MYH16Q9H6N6 1097 aa30.93■■■□□ 2.54
USP44-205ENST00000549639 CDHR2Q9BYE9 1310 aa30.93■■■□□ 2.54
USP44-205ENST00000549639 HTRA3P83110 453 aa30.92■■■□□ 2.54
USP44-205ENST00000549639 EAPPQ56P03 285 aaPredicted RBP30.92■■■□□ 2.54
USP44-205ENST00000549639 TAF1P21675 1872 aa30.92■■■□□ 2.54
USP44-205ENST00000549639 CACNA1FO60840 1977 aa30.92■■■□□ 2.54
USP44-205ENST00000549639 VAMP4O75379 141 aa30.91■■■□□ 2.54
USP44-205ENST00000549639 IGKV5-2P06315 115 aa30.9■■■□□ 2.54
USP44-205ENST00000549639 FLIIQ13045 1269 aa30.9■■■□□ 2.54
USP44-205ENST00000549639 NSFL1CQ9UNZ2 370 aaKnown RBP30.9■■■□□ 2.54
USP44-205ENST00000549639 EXOSC9Q06265 439 aaKnown RBP30.89■■■□□ 2.54
USP44-205ENST00000549639 G2E3Q7L622 706 aa30.89■■■□□ 2.54
USP44-205ENST00000549639 CLEC11AQ9Y240 323 aa30.88■■■□□ 2.53
USP44-205ENST00000549639 SCNN1DP51172 638 aa30.87■■■□□ 2.53
USP44-205ENST00000549639 CXCL9Q07325 125 aa30.87■■■□□ 2.53
USP44-205ENST00000549639 JMYQ8N9B5 988 aa30.87■■■□□ 2.53
USP44-205ENST00000549639 DUOX1Q9NRD9 1551 aa30.87■■■□□ 2.53
USP44-205ENST00000549639 ADAMTSL1Q8N6G6 1762 aa30.87■■■□□ 2.53
USP44-205ENST00000549639 NEURL1BA8MQ27 555 aa30.86■■■□□ 2.53
USP44-205ENST00000549639 FKBP5Q13451 457 aaPredicted RBP30.86■■■□□ 2.53
USP44-205ENST00000549639 TNIP1Q15025 636 aa30.86■■■□□ 2.53
USP44-205ENST00000549639 WASHC4Q2M389 1173 aa30.86■■■□□ 2.53
USP44-205ENST00000549639 EYA3Q99504 573 aa30.86■■■□□ 2.53
USP44-205ENST00000549639 CREBZFQ9NS37 354 aa30.86■■■□□ 2.53
USP44-205ENST00000549639 PASKQ96RG2 1323 aa30.85■■■□□ 2.53
USP44-205ENST00000549639 CIAPIN1Q6FI81 312 aa30.85■■■□□ 2.53
USP44-205ENST00000549639 USP50Q70EL3 339 aaPredicted RBP30.85■■■□□ 2.53
USP44-205ENST00000549639 SEC31BQ9NQW1 1179 aa30.85■■■□□ 2.53
USP44-205ENST00000549639 PODXL2Q9NZ53 605 aa30.85■■■□□ 2.53
USP44-205ENST00000549639 GPSM2P81274 684 aa30.84■■■□□ 2.53
USP44-205ENST00000549639 DNAAF4Q8WXU2 420 aa30.84■■■□□ 2.53
USP44-205ENST00000549639 SPINK5Q9NQ38 1064 aaPredicted RBP30.84■■■□□ 2.53
USP44-205ENST00000549639 C6orf229H3BNL8 230 aa30.83■■■□□ 2.53
USP44-205ENST00000549639 CTSWP56202 376 aa30.83■■■□□ 2.53
USP44-205ENST00000549639 CWF19L2Q2TBE0 894 aaKnown RBP30.83■■■□□ 2.53
USP44-205ENST00000549639 JARID2Q92833 1246 aaPredicted RBP30.83■■■□□ 2.53
USP44-205ENST00000549639 ITGBL1O95965 494 aaPredicted RBP30.82■■■□□ 2.52
USP44-205ENST00000549639 EPS15P42566 896 aa30.82■■■□□ 2.52
USP44-205ENST00000549639 LINS1Q8NG48 757 aa30.82■■■□□ 2.52
USP44-205ENST00000549639 CDC5LQ99459 802 aaKnown RBP30.82■■■□□ 2.52
USP44-205ENST00000549639 GPRC5DQ9NZD1 345 aa30.82■■■□□ 2.52
USP44-205ENST00000549639 POLLQ9UGP5 575 aa30.82■■■□□ 2.52
USP44-205ENST00000549639 H7C1W4 665 aa30.81■■■□□ 2.52
USP44-205ENST00000549639 ANKRD18AQ8IVF6 992 aa30.81■■■□□ 2.52
USP44-205ENST00000549639 LTBP1Q14766 1721 aa30.81■■■□□ 2.52
USP44-205ENST00000549639 GCKRQ14397 625 aa30.8■■■□□ 2.52
USP44-205ENST00000549639 CNTROBQ8N137 903 aa30.8■■■□□ 2.52
USP44-205ENST00000549639 TBC1D16Q8TBP0 767 aa30.8■■■□□ 2.52
USP44-205ENST00000549639 ADARB2Q9NS39 739 aaKnown RBP30.8■■■□□ 2.52
USP44-205ENST00000549639 COL4A1P02462 1669 aa30.8■■■□□ 2.52
USP44-205ENST00000549639 RTL9Q8NET4 1388 aa30.79■■■□□ 2.52
USP44-205ENST00000549639 ZNF521Q96K83 1311 aa30.79■■■□□ 2.52
USP44-205ENST00000549639 TTLL11Q8NHH1 800 aa30.79■■■□□ 2.52
USP44-205ENST00000549639 ANKIB1Q9P2G1 1089 aa30.79■■■□□ 2.52
USP44-205ENST00000549639 RAD17O75943 681 aa30.78■■■□□ 2.52
USP44-205ENST00000549639 GMPSP49915 693 aaPredicted RBP30.78■■■□□ 2.52
USP44-205ENST00000549639 PLA2G12BQ9BX93 195 aa30.78■■■□□ 2.52
USP44-205ENST00000549639 BCL2L13Q9BXK5 485 aa30.78■■■□□ 2.52
USP44-205ENST00000549639 YDJCA8MPS7 323 aa30.77■■■□□ 2.52
USP44-205ENST00000549639 MAP1SQ66K74 1059 aaPredicted RBP30.77■■■□□ 2.52
USP44-205ENST00000549639 UBE3BQ7Z3V4 1068 aa30.77■■■□□ 2.52
USP44-205ENST00000549639 CCDC85AQ96PX6 553 aaPredicted RBP30.77■■■□□ 2.52
USP44-205ENST00000549639 ZC3H12CQ9C0D7 883 aaKnown RBP30.77■■■□□ 2.52
USP44-205ENST00000549639 GGA1Q9UJY5 639 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms