RNA–Protein interactions for RNA: ENST00000549455.1

ATXN2-218, Transcript of ataxin 2, humanhuman

TSL 4

Gene ATXN2, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-218ENST00000549455 MPNDQ8N594 471 aa18.97■□□□□ 0.63
ATXN2-218ENST00000549455 VPS33BQ9H267 617 aa18.97■□□□□ 0.63
ATXN2-218ENST00000549455 ADARB2Q9NS39 739 aaKnown RBP18.97■□□□□ 0.63
ATXN2-218ENST00000549455 SP8Q8IXZ3 490 aa18.96■□□□□ 0.63
ATXN2-218ENST00000549455 RTFDC1Q9BY42 306 aaPredicted RBP18.96■□□□□ 0.63
ATXN2-218ENST00000549455 CHPF2Q9P2E5 772 aa18.96■□□□□ 0.63
ATXN2-218ENST00000549455 MYBBP1AQ9BQG0 1328 aaKnown RBP18.96■□□□□ 0.63
ATXN2-218ENST00000549455 DUOX1Q9NRD9 1551 aa18.95■□□□□ 0.62
ATXN2-218ENST00000549455 HSPA8P11142 646 aaKnown RBP18.95■□□□□ 0.62
ATXN2-218ENST00000549455 GMPSP49915 693 aaPredicted RBP18.95■□□□□ 0.62
ATXN2-218ENST00000549455 MAP2K1Q02750 393 aaPredicted RBP18.95■□□□□ 0.62
ATXN2-218ENST00000549455 GRAPQ13588 217 aa18.95■□□□□ 0.62
ATXN2-218ENST00000549455 GRAPLQ8TC17 118 aaPredicted RBP18.95■□□□□ 0.62
ATXN2-218ENST00000549455 CAPNS2Q96L46 248 aa18.95■□□□□ 0.62
ATXN2-218ENST00000549455 BCL2L13Q9BXK5 485 aa18.95■□□□□ 0.62
ATXN2-218ENST00000549455 ECE1P42892 770 aa18.94■□□□□ 0.62
ATXN2-218ENST00000549455 KIAA2012Q0VF49 1180 aa18.94■□□□□ 0.62
ATXN2-218ENST00000549455 HDGFL1Q5TGJ6 251 aa18.94■□□□□ 0.62
ATXN2-218ENST00000549455 CIAPIN1Q6FI81 312 aa18.94■□□□□ 0.62
ATXN2-218ENST00000549455 CYP4F22Q6NT55 531 aa18.94■□□□□ 0.62
ATXN2-218ENST00000549455 CHL1O00533 1208 aa18.93■□□□□ 0.62
ATXN2-218ENST00000549455 RAD17O75943 681 aa18.93■□□□□ 0.62
ATXN2-218ENST00000549455 WDR43Q15061 677 aaKnown RBP eCLIP18.93■□□□□ 0.62
ATXN2-218ENST00000549455 CST9Q5W186 159 aa18.93■□□□□ 0.62
ATXN2-218ENST00000549455 DDX10Q13206 875 aaKnown RBP18.92■□□□□ 0.62
ATXN2-218ENST00000549455 RUNDC1Q96C34 613 aa18.92■□□□□ 0.62
ATXN2-218ENST00000549455 TRIM35Q9UPQ4 493 aa18.92■□□□□ 0.62
ATXN2-218ENST00000549455 TLL2Q9Y6L7 1015 aa18.92■□□□□ 0.62
ATXN2-218ENST00000549455 TNIP1Q15025 636 aa18.91■□□□□ 0.62
ATXN2-218ENST00000549455 PLBD2Q8NHP8 589 aa18.91■□□□□ 0.62
ATXN2-218ENST00000549455 BEGAINQ9BUH8 593 aa18.91■□□□□ 0.62
ATXN2-218ENST00000549455 GLIS2Q9BZE0 524 aaPredicted RBP18.91■□□□□ 0.62
ATXN2-218ENST00000549455 CDHR2Q9BYE9 1310 aa18.91■□□□□ 0.62
ATXN2-218ENST00000549455 COL4A1P02462 1669 aa18.9■□□□□ 0.62
ATXN2-218ENST00000549455 ATP5J2-PTCD1G3V325 749 aa18.9■□□□□ 0.62
ATXN2-218ENST00000549455 CELF2O95319 508 aaKnown RBP18.9■□□□□ 0.62
ATXN2-218ENST00000549455 TMC4Q7Z404 712 aa18.9■□□□□ 0.62
ATXN2-218ENST00000549455 GPR101Q96P66 508 aaPredicted RBP18.9■□□□□ 0.62
ATXN2-218ENST00000549455 ZNF408Q9H9D4 720 aa18.9■□□□□ 0.62
ATXN2-218ENST00000549455 YDJCA8MPS7 323 aa18.89■□□□□ 0.61
ATXN2-218ENST00000549455 RTL5Q5HYW3 569 aaPredicted RBP18.89■□□□□ 0.61
ATXN2-218ENST00000549455 ANKRD13DQ6ZTN6 518 aa18.89■□□□□ 0.61
ATXN2-218ENST00000549455 FAM89AQ96GI7 184 aa18.89■□□□□ 0.61
ATXN2-218ENST00000549455 DBF4Q9UBU7 674 aaPredicted RBP18.89■□□□□ 0.61
ATXN2-218ENST00000549455 SHTN1A0MZ66 631 aa18.88■□□□□ 0.61
ATXN2-218ENST00000549455 HOXB7P09629 217 aa18.88■□□□□ 0.61
ATXN2-218ENST00000549455 TRPM4Q8TD43 1214 aa18.88■□□□□ 0.61
ATXN2-218ENST00000549455 CELF1Q92879 486 aaKnown RBP18.88■□□□□ 0.61
ATXN2-218ENST00000549455 ISCA1Q9BUE6 129 aa18.88■□□□□ 0.61
ATXN2-218ENST00000549455 AOC2O75106 756 aa18.87■□□□□ 0.61
ATXN2-218ENST00000549455 HIRAP54198 1017 aaPredicted RBP18.87■□□□□ 0.61
ATXN2-218ENST00000549455 DBNDD1Q9H9R9 158 aa18.87■□□□□ 0.61
ATXN2-218ENST00000549455 CNOT7Q9UIV1 285 aaKnown RBP18.87■□□□□ 0.61
ATXN2-218ENST00000549455 NSFL1CQ9UNZ2 370 aaKnown RBP18.87■□□□□ 0.61
ATXN2-218ENST00000549455 POLR2AP24928 1970 aaKnown RBP18.86■□□□□ 0.61
ATXN2-218ENST00000549455 H7C1D1 291 aa18.86■□□□□ 0.61
ATXN2-218ENST00000549455 RIMBP2O15034 1052 aa18.86■□□□□ 0.61
ATXN2-218ENST00000549455 SF3B3Q15393 1217 aaKnown RBP18.86■□□□□ 0.61
ATXN2-218ENST00000549455 WASHC4Q2M389 1173 aa18.86■□□□□ 0.61
ATXN2-218ENST00000549455 DUSP27Q5VZP5 1158 aa18.86■□□□□ 0.61
ATXN2-218ENST00000549455 SAPCD2Q86UD0 394 aa18.86■□□□□ 0.61
ATXN2-218ENST00000549455 MICALL2Q8IY33 904 aa18.86■□□□□ 0.61
ATXN2-218ENST00000549455 ABHD8Q96I13 439 aa18.86■□□□□ 0.61
ATXN2-218ENST00000549455 HYPKQ9NX55 129 aa18.86■□□□□ 0.61
ATXN2-218ENST00000549455 ADAMTS8Q9UP79 889 aa18.86■□□□□ 0.61
ATXN2-218ENST00000549455 ZBTB12Q9Y330 459 aaPredicted RBP18.86■□□□□ 0.61
ATXN2-218ENST00000549455 C6orf229H3BNL8 230 aa18.85■□□□□ 0.61
ATXN2-218ENST00000549455 ZC3H15Q8WU90 426 aaKnown RBP18.85■□□□□ 0.61
ATXN2-218ENST00000549455 CFAP44Q96MT7 982 aa18.85■□□□□ 0.61
ATXN2-218ENST00000549455 MBIPQ9NS73 344 aa18.85■□□□□ 0.61
ATXN2-218ENST00000549455 PGAP2Q9UHJ9 254 aa18.85■□□□□ 0.61
ATXN2-218ENST00000549455 TSKSQ9UJT2 592 aa18.85■□□□□ 0.61
ATXN2-218ENST00000549455 IRS4O14654 1257 aaPredicted RBP18.84■□□□□ 0.61
ATXN2-218ENST00000549455 GPSM2P81274 684 aa18.84■□□□□ 0.61
ATXN2-218ENST00000549455 CDC37L1Q7L3B6 337 aa18.84■□□□□ 0.61
ATXN2-218ENST00000549455 SCN9AQ15858 1988 aa18.83■□□□□ 0.61
ATXN2-218ENST00000549455 PSMD14O00487 310 aa18.83■□□□□ 0.6
ATXN2-218ENST00000549455 SLC34A2O95436 690 aa18.83■□□□□ 0.6
ATXN2-218ENST00000549455 MAP2K2P36507 400 aa18.83■□□□□ 0.6
ATXN2-218ENST00000549455 RIC3Q7Z5B4 369 aa18.83■□□□□ 0.6
ATXN2-218ENST00000549455 POLLQ9UGP5 575 aa18.83■□□□□ 0.6
ATXN2-218ENST00000549455 ECE2O60344 883 aa18.82■□□□□ 0.6
ATXN2-218ENST00000549455 GOLGA2Q08379 1002 aa18.82■□□□□ 0.6
ATXN2-218ENST00000549455 DOK7Q18PE1 504 aa18.82■□□□□ 0.6
ATXN2-218ENST00000549455 TBC1D10BQ4KMP7 808 aaPredicted RBP18.82■□□□□ 0.6
ATXN2-218ENST00000549455 SAMD7Q7Z3H4 446 aa18.82■□□□□ 0.6
ATXN2-218ENST00000549455 USP48Q86UV5 1035 aa18.82■□□□□ 0.6
ATXN2-218ENST00000549455 EYA3Q99504 573 aa18.82■□□□□ 0.6
ATXN2-218ENST00000549455 CASP8AP2Q9UKL3 1982 aa18.82■□□□□ 0.6
ATXN2-218ENST00000549455 HHIPL1Q96JK4 782 aa18.81■□□□□ 0.6
ATXN2-218ENST00000549455 SPEF2Q9C093 1822 aa18.8■□□□□ 0.6
ATXN2-218ENST00000549455 ELL2O00472 640 aaPredicted RBP18.8■□□□□ 0.6
ATXN2-218ENST00000549455 RPS8P62241 208 aaKnown RBP18.8■□□□□ 0.6
ATXN2-218ENST00000549455 RBM26Q5T8P6 1007 aaKnown RBP18.8■□□□□ 0.6
ATXN2-218ENST00000549455 DLK2Q6UY11 383 aa18.8■□□□□ 0.6
ATXN2-218ENST00000549455 TBC1D16Q8TBP0 767 aa18.8■□□□□ 0.6
ATXN2-218ENST00000549455 DPF2Q92785 391 aa18.8■□□□□ 0.6
ATXN2-218ENST00000549455 MYD88Q99836 296 aa18.8■□□□□ 0.6
ATXN2-218ENST00000549455 PHAXQ9H814 394 aaKnown RBP18.8■□□□□ 0.6
ATXN2-218ENST00000549455 RTL9Q8NET4 1388 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 229 ms