RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 SLC51AQ86UW1 340 aa23.98■■□□□ 1.43
CHMP1A-207ENST00000549328 RTL5Q5HYW3 569 aaPredicted RBP23.97■■□□□ 1.43
CHMP1A-207ENST00000549328 DPP8Q6V1X1 898 aaPredicted RBP23.97■■□□□ 1.43
CHMP1A-207ENST00000549328 FAM9BQ8IZU0 186 aa23.97■■□□□ 1.43
CHMP1A-207ENST00000549328 MPNDQ8N594 471 aa23.97■■□□□ 1.43
CHMP1A-207ENST00000549328 TAF1DQ9H5J8 278 aaPredicted RBP23.97■■□□□ 1.43
CHMP1A-207ENST00000549328 FANCIQ9NVI1 1328 aa23.96■■□□□ 1.43
CHMP1A-207ENST00000549328 PPIP5K2O43314 1243 aa23.96■■□□□ 1.43
CHMP1A-207ENST00000549328 PCCAP05165 728 aaPredicted RBP23.96■■□□□ 1.43
CHMP1A-207ENST00000549328 CHADLQ6NUI6 762 aa23.96■■□□□ 1.43
CHMP1A-207ENST00000549328 CWC25Q9NXE8 425 aaPredicted RBP23.96■■□□□ 1.43
CHMP1A-207ENST00000549328 HACL1Q9UJ83 578 aa23.96■■□□□ 1.43
CHMP1A-207ENST00000549328 MAP3K2Q9Y2U5 619 aa23.96■■□□□ 1.43
CHMP1A-207ENST00000549328 SALL2Q9Y467 1007 aaPredicted RBP23.96■■□□□ 1.43
CHMP1A-207ENST00000549328 PI4KAP2A4QPH2 592 aa23.95■■□□□ 1.42
CHMP1A-207ENST00000549328 SLC4A2P04920 1241 aa23.95■■□□□ 1.42
CHMP1A-207ENST00000549328 NIM1KQ8IY84 436 aa23.95■■□□□ 1.42
CHMP1A-207ENST00000549328 PI4KAP1Q8N8J0 262 aa23.95■■□□□ 1.42
CHMP1A-207ENST00000549328 COL4A5P29400 1685 aa23.95■■□□□ 1.42
CHMP1A-207ENST00000549328 AOC3Q16853 763 aa23.93■■□□□ 1.42
CHMP1A-207ENST00000549328 LDHDQ86WU2 507 aa23.93■■□□□ 1.42
CHMP1A-207ENST00000549328 POTEIP0CG38 1075 aa23.92■■□□□ 1.42
CHMP1A-207ENST00000549328 POTEJP0CG39 1038 aa23.92■■□□□ 1.42
CHMP1A-207ENST00000549328 EPHX2P34913 555 aa23.92■■□□□ 1.42
CHMP1A-207ENST00000549328 KIAA2012Q0VF49 1180 aa23.92■■□□□ 1.42
CHMP1A-207ENST00000549328 NEXNQ0ZGT2 675 aa23.92■■□□□ 1.42
CHMP1A-207ENST00000549328 PNMA8AQ86V59 439 aaPredicted RBP23.92■■□□□ 1.42
CHMP1A-207ENST00000549328 CELF1Q92879 486 aaKnown RBP23.92■■□□□ 1.42
CHMP1A-207ENST00000549328 TAF1P21675 1872 aa23.92■■□□□ 1.42
CHMP1A-207ENST00000549328 PDE8AO60658 829 aa23.91■■□□□ 1.42
CHMP1A-207ENST00000549328 VAMP4O75379 141 aa23.91■■□□□ 1.42
CHMP1A-207ENST00000549328 RPS8P62241 208 aaKnown RBP23.91■■□□□ 1.42
CHMP1A-207ENST00000549328 HTRA3P83110 453 aa23.91■■□□□ 1.42
CHMP1A-207ENST00000549328 ZNRF3Q9ULT6 936 aa23.91■■□□□ 1.42
CHMP1A-207ENST00000549328 GJA3Q9Y6H8 435 aa23.91■■□□□ 1.42
CHMP1A-207ENST00000549328 IGKV5-2P06315 115 aa23.9■■□□□ 1.42
CHMP1A-207ENST00000549328 G2E3Q7L622 706 aa23.9■■□□□ 1.42
CHMP1A-207ENST00000549328 KLRG1Q96E93 195 aa23.9■■□□□ 1.42
CHMP1A-207ENST00000549328 CDHR2Q9BYE9 1310 aa23.89■■□□□ 1.42
CHMP1A-207ENST00000549328 EXOSC9Q06265 439 aaKnown RBP23.89■■□□□ 1.41
CHMP1A-207ENST00000549328 CCDC152Q4G0S7 254 aa23.89■■□□□ 1.41
CHMP1A-207ENST00000549328 MYH16Q9H6N6 1097 aa23.89■■□□□ 1.41
CHMP1A-207ENST00000549328 LRRC37AA6NMS7 1700 aa23.89■■□□□ 1.41
CHMP1A-207ENST00000549328 FLIIQ13045 1269 aa23.88■■□□□ 1.41
CHMP1A-207ENST00000549328 EAPPQ56P03 285 aaPredicted RBP23.88■■□□□ 1.41
CHMP1A-207ENST00000549328 SPINK5Q9NQ38 1064 aaPredicted RBP23.88■■□□□ 1.41
CHMP1A-207ENST00000549328 NSFL1CQ9UNZ2 370 aaKnown RBP23.88■■□□□ 1.41
CHMP1A-207ENST00000549328 CACNA1FO60840 1977 aa23.88■■□□□ 1.41
CHMP1A-207ENST00000549328 LMOD1P29536 600 aaPredicted RBP23.87■■□□□ 1.41
CHMP1A-207ENST00000549328 NEURL1BA8MQ27 555 aa23.86■■□□□ 1.41
CHMP1A-207ENST00000549328 SCNN1DP51172 638 aa23.86■■□□□ 1.41
CHMP1A-207ENST00000549328 CXCL9Q07325 125 aa23.86■■□□□ 1.41
CHMP1A-207ENST00000549328 JARID2Q92833 1246 aaPredicted RBP23.86■■□□□ 1.41
CHMP1A-207ENST00000549328 FKBP5Q13451 457 aaPredicted RBP23.85■■□□□ 1.41
CHMP1A-207ENST00000549328 SEC31BQ9NQW1 1179 aa23.85■■□□□ 1.41
CHMP1A-207ENST00000549328 DUOX1Q9NRD9 1551 aa23.85■■□□□ 1.41
CHMP1A-207ENST00000549328 WASHC4Q2M389 1173 aa23.84■■□□□ 1.41
CHMP1A-207ENST00000549328 CWF19L2Q2TBE0 894 aaKnown RBP23.84■■□□□ 1.41
CHMP1A-207ENST00000549328 JMYQ8N9B5 988 aa23.84■■□□□ 1.41
CHMP1A-207ENST00000549328 CLEC11AQ9Y240 323 aa23.84■■□□□ 1.41
CHMP1A-207ENST00000549328 PASKQ96RG2 1323 aa23.84■■□□□ 1.41
CHMP1A-207ENST00000549328 ADAMTSL1Q8N6G6 1762 aa23.83■■□□□ 1.41
CHMP1A-207ENST00000549328 H7C1W4 665 aa23.83■■□□□ 1.41
CHMP1A-207ENST00000549328 ITGBL1O95965 494 aaPredicted RBP23.83■■□□□ 1.41
CHMP1A-207ENST00000549328 EPS15P42566 896 aa23.83■■□□□ 1.41
CHMP1A-207ENST00000549328 GPSM2P81274 684 aa23.83■■□□□ 1.41
CHMP1A-207ENST00000549328 TNIP1Q15025 636 aa23.83■■□□□ 1.41
CHMP1A-207ENST00000549328 CIAPIN1Q6FI81 312 aa23.83■■□□□ 1.41
CHMP1A-207ENST00000549328 DNAAF4Q8WXU2 420 aa23.83■■□□□ 1.41
CHMP1A-207ENST00000549328 PODXL2Q9NZ53 605 aa23.83■■□□□ 1.41
CHMP1A-207ENST00000549328 POLLQ9UGP5 575 aa23.83■■□□□ 1.41
CHMP1A-207ENST00000549328 ZNF521Q96K83 1311 aa23.83■■□□□ 1.4
CHMP1A-207ENST00000549328 COL4A1P02462 1669 aa23.83■■□□□ 1.4
CHMP1A-207ENST00000549328 C6orf229H3BNL8 230 aa23.82■■□□□ 1.4
CHMP1A-207ENST00000549328 CTSWP56202 376 aa23.82■■□□□ 1.4
CHMP1A-207ENST00000549328 USP50Q70EL3 339 aaPredicted RBP23.82■■□□□ 1.4
CHMP1A-207ENST00000549328 LINS1Q8NG48 757 aa23.82■■□□□ 1.4
CHMP1A-207ENST00000549328 EYA3Q99504 573 aa23.82■■□□□ 1.4
CHMP1A-207ENST00000549328 CREBZFQ9NS37 354 aa23.82■■□□□ 1.4
CHMP1A-207ENST00000549328 GCKRQ14397 625 aa23.81■■□□□ 1.4
CHMP1A-207ENST00000549328 TTLL11Q8NHH1 800 aa23.81■■□□□ 1.4
CHMP1A-207ENST00000549328 GPRC5DQ9NZD1 345 aa23.81■■□□□ 1.4
CHMP1A-207ENST00000549328 LTBP1Q14766 1721 aa23.8■■□□□ 1.4
CHMP1A-207ENST00000549328 ANKRD18AQ8IVF6 992 aa23.8■■□□□ 1.4
CHMP1A-207ENST00000549328 CNTROBQ8N137 903 aa23.8■■□□□ 1.4
CHMP1A-207ENST00000549328 TBC1D16Q8TBP0 767 aa23.8■■□□□ 1.4
CHMP1A-207ENST00000549328 CDC5LQ99459 802 aaKnown RBP23.8■■□□□ 1.4
CHMP1A-207ENST00000549328 YDJCA8MPS7 323 aa23.79■■□□□ 1.4
CHMP1A-207ENST00000549328 RAD17O75943 681 aa23.79■■□□□ 1.4
CHMP1A-207ENST00000549328 UBE3BQ7Z3V4 1068 aa23.79■■□□□ 1.4
CHMP1A-207ENST00000549328 CCDC85AQ96PX6 553 aaPredicted RBP23.79■■□□□ 1.4
CHMP1A-207ENST00000549328 ADARB2Q9NS39 739 aaKnown RBP23.79■■□□□ 1.4
CHMP1A-207ENST00000549328 RTL9Q8NET4 1388 aa23.78■■□□□ 1.4
CHMP1A-207ENST00000549328 GMPSP49915 693 aaPredicted RBP23.78■■□□□ 1.4
CHMP1A-207ENST00000549328 PLA2G12BQ9BX93 195 aa23.78■■□□□ 1.4
CHMP1A-207ENST00000549328 ZC3H12CQ9C0D7 883 aaKnown RBP23.78■■□□□ 1.4
CHMP1A-207ENST00000549328 ANKIB1Q9P2G1 1089 aa23.78■■□□□ 1.4
CHMP1A-207ENST00000549328 RIMBP2O15034 1052 aa23.77■■□□□ 1.4
CHMP1A-207ENST00000549328 MAP1SQ66K74 1059 aaPredicted RBP23.77■■□□□ 1.4
CHMP1A-207ENST00000549328 GGA1Q9UJY5 639 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms