RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 ZNF34Q8IZ26 560 aa6.4□□□□□ -1.38
APP-217ENST00000548570 PLBD2Q8NHP8 589 aa6.4□□□□□ -1.38
APP-217ENST00000548570 PTCD2Q8WV60 388 aaKnown RBP6.4□□□□□ -1.38
APP-217ENST00000548570 ARHGAP45Q92619 1136 aa6.4□□□□□ -1.38
APP-217ENST00000548570 ISCA1Q9BUE6 129 aa6.4□□□□□ -1.38
APP-217ENST00000548570 STK31Q9BXU1 1019 aa6.4□□□□□ -1.38
APP-217ENST00000548570 MAP3K2Q9Y2U5 619 aa6.4□□□□□ -1.38
APP-217ENST00000548570 ZNF330Q9Y3S2 320 aaPredicted RBP6.4□□□□□ -1.38
APP-217ENST00000548570 ABCC4O15439 1325 aa6.4□□□□□ -1.39
APP-217ENST00000548570 ATP5J2-PTCD1G3V325 749 aa6.39□□□□□ -1.39
APP-217ENST00000548570 CASP7P55210 303 aa6.39□□□□□ -1.39
APP-217ENST00000548570 RRP1P56182 461 aaKnown RBP6.39□□□□□ -1.39
APP-217ENST00000548570 TCIRG1Q13488 830 aa6.39□□□□□ -1.39
APP-217ENST00000548570 NFIXQ14938 502 aa6.39□□□□□ -1.39
APP-217ENST00000548570 CWF19L2Q2TBE0 894 aaKnown RBP6.39□□□□□ -1.39
APP-217ENST00000548570 ATF7IPQ6VMQ6 1270 aa6.39□□□□□ -1.39
APP-217ENST00000548570 GIGYF2Q6Y7W6 1299 aaKnown RBP6.39□□□□□ -1.39
APP-217ENST00000548570 SYNE4Q8N205 404 aa6.39□□□□□ -1.39
APP-217ENST00000548570 PANK1Q8TE04 598 aa6.39□□□□□ -1.39
APP-217ENST00000548570 FRAT1Q92837 279 aaPredicted RBP6.39□□□□□ -1.39
APP-217ENST00000548570 METTL22Q9BUU2 404 aaPredicted RBP6.39□□□□□ -1.39
APP-217ENST00000548570 SUPT16HQ9Y5B9 1047 aaKnown RBP6.39□□□□□ -1.39
APP-217ENST00000548570 PTPRCP08575 1304 aa6.39□□□□□ -1.39
APP-217ENST00000548570 LAMB4A4D0S4 1761 aa6.39□□□□□ -1.39
APP-217ENST00000548570 A0A087WZG4 1122 aa6.38□□□□□ -1.39
APP-217ENST00000548570 NEURL1BA8MQ27 555 aa6.38□□□□□ -1.39
APP-217ENST00000548570 POLRMTO00411 1230 aaKnown RBP6.38□□□□□ -1.39
APP-217ENST00000548570 RGL2O15211 777 aa6.38□□□□□ -1.39
APP-217ENST00000548570 HRO43593 1189 aa6.38□□□□□ -1.39
APP-217ENST00000548570 RFC4P35249 363 aa6.38□□□□□ -1.39
APP-217ENST00000548570 TRIM28Q13263 835 aaKnown RBP6.38□□□□□ -1.39
APP-217ENST00000548570 FKBP5Q13451 457 aaPredicted RBP6.38□□□□□ -1.39
APP-217ENST00000548570 SUSD4Q5VX71 490 aa6.38□□□□□ -1.39
APP-217ENST00000548570 ZKSCAN2Q63HK3 967 aa6.38□□□□□ -1.39
APP-217ENST00000548570 MSL1Q68DK7 614 aa6.38□□□□□ -1.39
APP-217ENST00000548570 INTS3Q68E01 1043 aaKnown RBP6.38□□□□□ -1.39
APP-217ENST00000548570 NLRP10Q86W26 655 aa6.38□□□□□ -1.39
APP-217ENST00000548570 TMEM57Q8N5G2 664 aa6.38□□□□□ -1.39
APP-217ENST00000548570 DNAAF4Q8WXU2 420 aa6.38□□□□□ -1.39
APP-217ENST00000548570 JARID2Q92833 1246 aaPredicted RBP6.38□□□□□ -1.39
APP-217ENST00000548570 CLUAP1Q96AJ1 413 aa6.38□□□□□ -1.39
APP-217ENST00000548570 MYD88Q99836 296 aa6.38□□□□□ -1.39
APP-217ENST00000548570 KIF16BQ96L93 1317 aa6.38□□□□□ -1.39
APP-217ENST00000548570 ATP10DQ9P241 1426 aa6.38□□□□□ -1.39
APP-217ENST00000548570 VIRMAQ69YN4 1812 aaKnown RBP6.38□□□□□ -1.39
APP-217ENST00000548570 MYH14Q7Z406 1995 aaKnown RBP6.38□□□□□ -1.39
APP-217ENST00000548570 ZBTB7AO95365 584 aa6.37□□□□□ -1.39
APP-217ENST00000548570 NTSR2O95665 410 aa6.37□□□□□ -1.39
APP-217ENST00000548570 GPTP24298 496 aa6.37□□□□□ -1.39
APP-217ENST00000548570 PSEN2P49810 448 aa6.37□□□□□ -1.39
APP-217ENST00000548570 CLEC4GQ6UXB4 293 aa6.37□□□□□ -1.39
APP-217ENST00000548570 KIF6Q6ZMV9 814 aa6.37□□□□□ -1.39
APP-217ENST00000548570 BICDL1Q6ZP65 573 aa6.37□□□□□ -1.39
APP-217ENST00000548570 RIC3Q7Z5B4 369 aa6.37□□□□□ -1.39
APP-217ENST00000548570 CCDC24Q8N4L8 307 aa6.37□□□□□ -1.39
APP-217ENST00000548570 FLAD1Q8NFF5 587 aa6.37□□□□□ -1.39
APP-217ENST00000548570 KAZALD1Q96I82 304 aa6.37□□□□□ -1.39
APP-217ENST00000548570 API5Q9BZZ5 524 aaKnown RBP6.37□□□□□ -1.39
APP-217ENST00000548570 USP44Q9H0E7 712 aa6.37□□□□□ -1.39
APP-217ENST00000548570 TAF1LQ8IZX4 1826 aa6.36□□□□□ -1.39
APP-217ENST00000548570 CARMIL3Q8ND23 1372 aa6.36□□□□□ -1.39
APP-217ENST00000548570 ABCC12Q96J65 1359 aa6.36□□□□□ -1.39
APP-217ENST00000548570 IBTKQ9P2D0 1353 aaPredicted RBP6.36□□□□□ -1.39
APP-217ENST00000548570 UTYO14607 1347 aa6.36□□□□□ -1.39
APP-217ENST00000548570 GOLGA8CPA6NN73 597 aa6.36□□□□□ -1.39
APP-217ENST00000548570 H7C1W4 665 aa6.36□□□□□ -1.39
APP-217ENST00000548570 ZBTB7BO15156 539 aaPredicted RBP6.36□□□□□ -1.39
APP-217ENST00000548570 ZPR1O75312 459 aa6.36□□□□□ -1.39
APP-217ENST00000548570 ALDH1L1O75891 902 aa6.36□□□□□ -1.39
APP-217ENST00000548570 MMP10P09238 476 aa6.36□□□□□ -1.39
APP-217ENST00000548570 NBPF7P0C2Y1 421 aaPredicted RBP6.36□□□□□ -1.39
APP-217ENST00000548570 IRX6P78412 446 aaPredicted RBP6.36□□□□□ -1.39
APP-217ENST00000548570 FOXK1P85037 733 aa6.36□□□□□ -1.39
APP-217ENST00000548570 GCKRQ14397 625 aa6.36□□□□□ -1.39
APP-217ENST00000548570 EPHA10Q5JZY3 1008 aa6.36□□□□□ -1.39
APP-217ENST00000548570 DMRTA1Q5VZB9 504 aa6.36□□□□□ -1.39
APP-217ENST00000548570 SLC4A10Q6U841 1118 aa6.36□□□□□ -1.39
APP-217ENST00000548570 DZIP1LQ8IYY4 767 aaKnown RBP6.36□□□□□ -1.39
APP-217ENST00000548570 LINS1Q8NG48 757 aa6.36□□□□□ -1.39
APP-217ENST00000548570 KCNK17Q96T54 332 aa6.36□□□□□ -1.39
APP-217ENST00000548570 MEIS3Q99687 375 aa6.36□□□□□ -1.39
APP-217ENST00000548570 CHMP4AQ9BY43 222 aa6.36□□□□□ -1.39
APP-217ENST00000548570 SRCAPQ6ZRS2 3230 aa6.36□□□□□ -1.39
APP-217ENST00000548570 UBR3Q6ZT12 1888 aa6.35□□□□□ -1.39
APP-217ENST00000548570 TULP1O00294 542 aaPredicted RBP6.35□□□□□ -1.39
APP-217ENST00000548570 DDX58O95786 925 aaKnown RBP6.35□□□□□ -1.39
APP-217ENST00000548570 SERPINB2P05120 415 aa6.35□□□□□ -1.39
APP-217ENST00000548570 PDE3AQ14432 1141 aa6.35□□□□□ -1.39
APP-217ENST00000548570 PRR5LQ6MZQ0 368 aa6.35□□□□□ -1.39
APP-217ENST00000548570 SLC51AQ86UW1 340 aa6.35□□□□□ -1.39
APP-217ENST00000548570 NUTM1Q86Y26 1132 aa6.35□□□□□ -1.39
APP-217ENST00000548570 PLPP6Q8IY26 295 aa6.35□□□□□ -1.39
APP-217ENST00000548570 NLGN1Q8N2Q7 840 aa6.35□□□□□ -1.39
APP-217ENST00000548570 SLC16A10Q8TF71 515 aa6.35□□□□□ -1.39
APP-217ENST00000548570 CRBNQ96SW2 442 aa6.35□□□□□ -1.39
APP-217ENST00000548570 MTFR1LQ9H019 292 aa6.35□□□□□ -1.39
APP-217ENST00000548570 NIP7Q9Y221 180 aaKnown RBP eCLIP6.35□□□□□ -1.39
APP-217ENST00000548570 COG6Q9Y2V7 657 aa6.35□□□□□ -1.39
APP-217ENST00000548570 CASZ1Q86V15 1759 aa6.35□□□□□ -1.39
APP-217ENST00000548570 PXDNLA1KZ92 1463 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms