RNA–Protein interactions for RNA: ENST00000547417.1

CPNE8-205, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-205ENST00000547417 CPB1P15086 417 aa4.15□□□□□ -1.75
CPNE8-205ENST00000547417 IGFBP4P22692 258 aa4.15□□□□□ -1.75
CPNE8-205ENST00000547417 INPP5BP32019 993 aa4.15□□□□□ -1.75
CPNE8-205ENST00000547417 IDH3AP50213 366 aa4.15□□□□□ -1.75
CPNE8-205ENST00000547417 MCTP1Q6DN14 999 aa4.15□□□□□ -1.75
CPNE8-205ENST00000547417 DHX32Q7L7V1 743 aaKnown RBP4.15□□□□□ -1.75
CPNE8-205ENST00000547417 WFDC8Q8IUA0 241 aa4.15□□□□□ -1.75
CPNE8-205ENST00000547417 TRPM4Q8TD43 1214 aa4.15□□□□□ -1.75
CPNE8-205ENST00000547417 WFDC12Q8WWY7 111 aa4.15□□□□□ -1.75
CPNE8-205ENST00000547417 LPIN3Q9BQK8 851 aa4.15□□□□□ -1.75
CPNE8-205ENST00000547417 MAFBQ9Y5Q3 323 aaPredicted RBP4.15□□□□□ -1.75
CPNE8-205ENST00000547417 TARSP26639 723 aaKnown RBP4.14□□□□□ -1.75
CPNE8-205ENST00000547417 GRNP28799 593 aaKnown RBP4.14□□□□□ -1.75
CPNE8-205ENST00000547417 IREB2P48200 963 aaKnown RBP4.14□□□□□ -1.75
CPNE8-205ENST00000547417 ARSDP51689 593 aa4.14□□□□□ -1.75
CPNE8-205ENST00000547417 DPYDQ12882 1025 aa4.14□□□□□ -1.75
CPNE8-205ENST00000547417 PTK7Q13308 1070 aa4.14□□□□□ -1.75
CPNE8-205ENST00000547417 GRIK5Q16478 980 aa4.14□□□□□ -1.75
CPNE8-205ENST00000547417 CRTC2Q53ET0 693 aaPredicted RBP4.14□□□□□ -1.75
CPNE8-205ENST00000547417 PERM1Q5SV97 790 aa4.14□□□□□ -1.75
CPNE8-205ENST00000547417 ELMSAN1Q6PJG2 1045 aa4.14□□□□□ -1.75
CPNE8-205ENST00000547417 IGF2-ASQ6U949 168 aa4.14□□□□□ -1.75
CPNE8-205ENST00000547417 KRT25Q7Z3Z0 450 aa4.14□□□□□ -1.75
CPNE8-205ENST00000547417 TTC9Q92623 222 aa4.14□□□□□ -1.75
CPNE8-205ENST00000547417 GLMNQ92990 594 aa4.14□□□□□ -1.75
CPNE8-205ENST00000547417 IFT43Q96FT9 208 aa4.14□□□□□ -1.75
CPNE8-205ENST00000547417 KLK14Q9P0G3 267 aa4.14□□□□□ -1.75
CPNE8-205ENST00000547417 ZFATQ9P243 1243 aa4.14□□□□□ -1.75
CPNE8-205ENST00000547417 LGR5O75473 907 aa4.13□□□□□ -1.75
CPNE8-205ENST00000547417 RARAP10276 462 aa4.13□□□□□ -1.75
CPNE8-205ENST00000547417 ARID4AP29374 1257 aaPredicted RBP4.13□□□□□ -1.75
CPNE8-205ENST00000547417 NOS3P29474 1203 aa4.13□□□□□ -1.75
CPNE8-205ENST00000547417 GPLD1P80108 840 aa4.13□□□□□ -1.75
CPNE8-205ENST00000547417 DGKZQ13574 1117 aa4.13□□□□□ -1.75
CPNE8-205ENST00000547417 KANK4Q5T7N3 995 aaPredicted RBP4.13□□□□□ -1.75
CPNE8-205ENST00000547417 ANKMY2Q8IV38 441 aa4.13□□□□□ -1.75
CPNE8-205ENST00000547417 FNBP4Q8N3X1 1017 aaPredicted RBP4.13□□□□□ -1.75
CPNE8-205ENST00000547417 PODXL2Q9NZ53 605 aa4.13□□□□□ -1.75
CPNE8-205ENST00000547417 FAM196BA6NMK8 535 aa4.12□□□□□ -1.75
CPNE8-205ENST00000547417 SASH3O75995 380 aa4.12□□□□□ -1.75
CPNE8-205ENST00000547417 MICAL2O94851 1124 aa4.12□□□□□ -1.75
CPNE8-205ENST00000547417 MLLT1Q03111 559 aaPredicted RBP4.12□□□□□ -1.75
CPNE8-205ENST00000547417 PLAURQ03405 335 aa4.12□□□□□ -1.75
CPNE8-205ENST00000547417 C11orf91Q3C1V1 193 aa4.12□□□□□ -1.75
CPNE8-205ENST00000547417 PROSER2Q86WR7 435 aaPredicted RBP4.12□□□□□ -1.75
CPNE8-205ENST00000547417 VTI1AQ96AJ9 217 aa4.12□□□□□ -1.75
CPNE8-205ENST00000547417 PPP1R12CQ9BZL4 782 aa4.12□□□□□ -1.75
CPNE8-205ENST00000547417 SMG9Q9H0W8 520 aaKnown RBP4.12□□□□□ -1.75
CPNE8-205ENST00000547417 C1orf115Q9H7X2 142 aa4.12□□□□□ -1.75
CPNE8-205ENST00000547417 VRTNQ9H8Y1 702 aa4.12□□□□□ -1.75
CPNE8-205ENST00000547417 RNF112Q9ULX5 631 aa4.12□□□□□ -1.75
CPNE8-205ENST00000547417 USP17L15C9J2P7 530 aa4.11□□□□□ -1.75
CPNE8-205ENST00000547417 USP17L10C9JJH3 530 aa4.11□□□□□ -1.75
CPNE8-205ENST00000547417 USP17L13C9JLJ4 530 aa4.11□□□□□ -1.75
CPNE8-205ENST00000547417 USP17L12C9JPN9 530 aa4.11□□□□□ -1.75
CPNE8-205ENST00000547417 USP17L11C9JVI0 530 aa4.11□□□□□ -1.75
CPNE8-205ENST00000547417 USP17L21D6R901 530 aa4.11□□□□□ -1.75
CPNE8-205ENST00000547417 USP17L18D6R9N7 530 aa4.11□□□□□ -1.75
CPNE8-205ENST00000547417 USP17L22D6RA61 530 aa4.11□□□□□ -1.75
CPNE8-205ENST00000547417 USP17L17D6RBQ6 530 aa4.11□□□□□ -1.75
CPNE8-205ENST00000547417 USP17L19D6RCP7 530 aa4.11□□□□□ -1.75
CPNE8-205ENST00000547417 USP17L20D6RJB6 530 aa4.11□□□□□ -1.75
CPNE8-205ENST00000547417 FOXO3O43524 673 aa4.11□□□□□ -1.75
CPNE8-205ENST00000547417 DEAF1O75398 565 aaPredicted RBP4.11□□□□□ -1.75
CPNE8-205ENST00000547417 TXKP42681 527 aa4.11□□□□□ -1.75
CPNE8-205ENST00000547417 NRLP54845 237 aa4.11□□□□□ -1.75
CPNE8-205ENST00000547417 USP17L24Q0WX57 530 aa4.11□□□□□ -1.75
CPNE8-205ENST00000547417 PRR23CQ6ZRP0 262 aa4.11□□□□□ -1.75
CPNE8-205ENST00000547417 HFE2Q6ZVN8 426 aa4.11□□□□□ -1.75
CPNE8-205ENST00000547417 CLUAP1Q96AJ1 413 aa4.11□□□□□ -1.75
CPNE8-205ENST00000547417 MYO19Q96H55 970 aa4.11□□□□□ -1.75
CPNE8-205ENST00000547417 MEGF10Q96KG7 1140 aa4.11□□□□□ -1.75
CPNE8-205ENST00000547417 CALR3Q96L12 384 aaKnown RBP4.11□□□□□ -1.75
CPNE8-205ENST00000547417 QTRT2Q9H974 415 aaKnown RBP4.11□□□□□ -1.75
CPNE8-205ENST00000547417 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.11□□□□□ -1.75
CPNE8-205ENST00000547417 TLR7Q9NYK1 1049 aaKnown RBP4.11□□□□□ -1.75
CPNE8-205ENST00000547417 OPLAHO14841 1288 aa4.1□□□□□ -1.75
CPNE8-205ENST00000547417 PAX4O43316 350 aa4.1□□□□□ -1.75
CPNE8-205ENST00000547417 EGFRP00533 1210 aa4.1□□□□□ -1.75
CPNE8-205ENST00000547417 YBX3P16989 372 aaKnown RBP eCLIP4.1□□□□□ -1.75
CPNE8-205ENST00000547417 EIF2AK2P19525 551 aaKnown RBP4.1□□□□□ -1.75
CPNE8-205ENST00000547417 WEE1P30291 646 aa4.1□□□□□ -1.75
CPNE8-205ENST00000547417 SLC51AQ86UW1 340 aa4.1□□□□□ -1.75
CPNE8-205ENST00000547417 DZIP1LQ8IYY4 767 aaKnown RBP4.1□□□□□ -1.75
CPNE8-205ENST00000547417 AKTIPQ9H8T0 292 aa4.1□□□□□ -1.75
CPNE8-205ENST00000547417 RTCBQ9Y3I0 505 aaKnown RBP4.1□□□□□ -1.75
CPNE8-205ENST00000547417 COL17A1Q9UMD9 1497 aaPredicted RBP4.1□□□□□ -1.75
CPNE8-205ENST00000547417 LOC102724428A0A0B4J2F2 783 aa4.09□□□□□ -1.75
CPNE8-205ENST00000547417 J3QW42 95 aa4.09□□□□□ -1.75
CPNE8-205ENST00000547417 DLL1O00548 723 aa4.09□□□□□ -1.75
CPNE8-205ENST00000547417 XYLBO75191 536 aa4.09□□□□□ -1.75
CPNE8-205ENST00000547417 PSAPP07602 524 aa4.09□□□□□ -1.75
CPNE8-205ENST00000547417 PDIA4P13667 645 aaKnown RBP4.09□□□□□ -1.75
CPNE8-205ENST00000547417 LMOD1P29536 600 aaPredicted RBP4.09□□□□□ -1.75
CPNE8-205ENST00000547417 SIK1P57059 783 aa4.09□□□□□ -1.75
CPNE8-205ENST00000547417 CMTR1Q8N1G2 835 aaKnown RBP4.09□□□□□ -1.75
CPNE8-205ENST00000547417 TMEM130Q8N3G9 435 aa4.09□□□□□ -1.75
CPNE8-205ENST00000547417 FAM200AQ8TCP9 573 aa4.09□□□□□ -1.75
CPNE8-205ENST00000547417 DCAF11Q8TEB1 546 aa4.09□□□□□ -1.75
CPNE8-205ENST00000547417 PLD4Q96BZ4 506 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms