RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 CLEC4GQ6UXB4 293 aa20.15■□□□□ 0.82
BRF1-208ENST00000546997 ZBTB38Q8NAP3 1195 aaPredicted RBP20.15■□□□□ 0.82
BRF1-208ENST00000546997 USP42Q9H9J4 1324 aaKnown RBP20.15■□□□□ 0.82
BRF1-208ENST00000546997 COL24A1Q17RW2 1714 aa20.15■□□□□ 0.82
BRF1-208ENST00000546997 ZPR1O75312 459 aa20.14■□□□□ 0.81
BRF1-208ENST00000546997 EXOC6BQ9Y2D4 811 aa20.14■□□□□ 0.81
BRF1-208ENST00000546997 DDX60Q8IY21 1712 aaKnown RBP20.14■□□□□ 0.81
BRF1-208ENST00000546997 RFC4P35249 363 aa20.14■□□□□ 0.81
BRF1-208ENST00000546997 FOXO4P98177 505 aa20.14■□□□□ 0.81
BRF1-208ENST00000546997 EZH2Q15910 746 aaKnown RBP20.14■□□□□ 0.81
BRF1-208ENST00000546997 RABL6Q3YEC7 729 aaPredicted RBP20.14■□□□□ 0.81
BRF1-208ENST00000546997 SUSD4Q5VX71 490 aa20.14■□□□□ 0.81
BRF1-208ENST00000546997 CAMKK2Q96RR4 588 aa20.14■□□□□ 0.81
BRF1-208ENST00000546997 ATXN8OSP0DMR3 200 aa20.13■□□□□ 0.81
BRF1-208ENST00000546997 TBC1D9BQ66K14 1250 aa20.13■□□□□ 0.81
BRF1-208ENST00000546997 AKT1S1Q96B36 256 aa20.13■□□□□ 0.81
BRF1-208ENST00000546997 TRMT112Q9UI30 125 aaKnown RBP20.13■□□□□ 0.81
BRF1-208ENST00000546997 CASZ1Q86V15 1759 aa20.13■□□□□ 0.81
BRF1-208ENST00000546997 FAM177BA6PVY3 158 aa20.12■□□□□ 0.81
BRF1-208ENST00000546997 APBB1O00213 710 aa20.12■□□□□ 0.81
BRF1-208ENST00000546997 SSFA2P28290 1259 aa20.12■□□□□ 0.81
BRF1-208ENST00000546997 LAMB2P55268 1798 aa20.12■□□□□ 0.81
BRF1-208ENST00000546997 RGL2O15211 777 aa20.12■□□□□ 0.81
BRF1-208ENST00000546997 BMP2KLQ5H9B9 411 aa20.12■□□□□ 0.81
BRF1-208ENST00000546997 GRPEL1Q9HAV7 217 aa20.12■□□□□ 0.81
BRF1-208ENST00000546997 CIZ1Q9ULV3 898 aaPredicted RBP20.12■□□□□ 0.81
BRF1-208ENST00000546997 TPM2P07951 284 aa20.11■□□□□ 0.81
BRF1-208ENST00000546997 PARP10Q53GL7 1025 aa20.11■□□□□ 0.81
BRF1-208ENST00000546997 BICDL1Q6ZP65 573 aa20.11■□□□□ 0.81
BRF1-208ENST00000546997 CDHR2Q9BYE9 1310 aa20.11■□□□□ 0.81
BRF1-208ENST00000546997 ESPNB1AK53 854 aa20.1■□□□□ 0.81
BRF1-208ENST00000546997 SF3B2Q13435 895 aaKnown RBP20.1■□□□□ 0.81
BRF1-208ENST00000546997 LMBR1LQ6UX01 489 aa20.1■□□□□ 0.81
BRF1-208ENST00000546997 DEFB132Q7Z7B7 95 aa20.1■□□□□ 0.81
BRF1-208ENST00000546997 TFCP2L1Q9NZI6 479 aa20.1■□□□□ 0.81
BRF1-208ENST00000546997 PA2G4Q9UQ80 394 aaKnown RBP20.1■□□□□ 0.81
BRF1-208ENST00000546997 NTSR2O95665 410 aa20.1■□□□□ 0.81
BRF1-208ENST00000546997 SKOR2Q2VWA4 1001 aaPredicted RBP20.1■□□□□ 0.81
BRF1-208ENST00000546997 C22orf23Q9BZE7 217 aa20.1■□□□□ 0.81
BRF1-208ENST00000546997 SURF6O75683 361 aaKnown RBP20.09■□□□□ 0.81
BRF1-208ENST00000546997 KLHDC4Q8TBB5 520 aa20.09■□□□□ 0.81
BRF1-208ENST00000546997 UTP14AQ9BVJ6 771 aaKnown RBP20.09■□□□□ 0.81
BRF1-208ENST00000546997 IRS4O14654 1257 aaPredicted RBP20.08■□□□□ 0.81
BRF1-208ENST00000546997 SMARCA5O60264 1052 aaPredicted RBP20.08■□□□□ 0.81
BRF1-208ENST00000546997 BAG6P46379 1132 aa20.08■□□□□ 0.81
BRF1-208ENST00000546997 SNX21Q969T3 373 aa20.08■□□□□ 0.81
BRF1-208ENST00000546997 PLA2G12BQ9BX93 195 aa20.08■□□□□ 0.81
BRF1-208ENST00000546997 SH3TC1Q8TE82 1336 aa20.08■□□□□ 0.81
BRF1-208ENST00000546997 HMGB2P26583 209 aaKnown RBP20.08■□□□□ 0.8
BRF1-208ENST00000546997 DDIT3P35638 169 aa20.08■□□□□ 0.8
BRF1-208ENST00000546997 NUTM1Q86Y26 1132 aa20.08■□□□□ 0.8
BRF1-208ENST00000546997 PANK2Q9BZ23 570 aa20.08■□□□□ 0.8
BRF1-208ENST00000546997 RFX5P48382 616 aaPredicted RBP20.07■□□□□ 0.8
BRF1-208ENST00000546997 CCDC125Q86Z20 511 aa20.07■□□□□ 0.8
BRF1-208ENST00000546997 CHMP3Q9Y3E7 222 aa20.07■□□□□ 0.8
BRF1-208ENST00000546997 GYS1P13807 737 aa20.06■□□□□ 0.8
BRF1-208ENST00000546997 PLEKHM2Q8IWE5 1019 aa20.06■□□□□ 0.8
BRF1-208ENST00000546997 HCLS1P14317 486 aaPredicted RBP20.06■□□□□ 0.8
BRF1-208ENST00000546997 CCDC85AQ96PX6 553 aaPredicted RBP20.06■□□□□ 0.8
BRF1-208ENST00000546997 SETDB2Q96T68 719 aa20.06■□□□□ 0.8
BRF1-208ENST00000546997 COL23A1Q86Y22 540 aaPredicted RBP20.05■□□□□ 0.8
BRF1-208ENST00000546997 HSCBQ8IWL3 235 aa20.05■□□□□ 0.8
BRF1-208ENST00000546997 PNPLA7Q6ZV29 1317 aa20.05■□□□□ 0.8
BRF1-208ENST00000546997 MFAP1P55081 439 aaKnown RBP20.04■□□□□ 0.8
BRF1-208ENST00000546997 PTPN12Q05209 780 aaKnown RBP20.04■□□□□ 0.8
BRF1-208ENST00000546997 NFIXQ14938 502 aa20.04■□□□□ 0.8
BRF1-208ENST00000546997 SIL1Q9H173 461 aa20.04■□□□□ 0.8
BRF1-208ENST00000546997 QSER1Q2KHR3 1735 aa20.04■□□□□ 0.8
BRF1-208ENST00000546997 CSF1RP07333 972 aa20.04■□□□□ 0.8
BRF1-208ENST00000546997 CTSWP56202 376 aa20.04■□□□□ 0.8
BRF1-208ENST00000546997 C16orf71Q8IYS4 520 aaPredicted RBP20.04■□□□□ 0.8
BRF1-208ENST00000546997 LRRCC1Q9C099 1032 aa20.04■□□□□ 0.8
BRF1-208ENST00000546997 PDE8AO60658 829 aa20.03■□□□□ 0.8
BRF1-208ENST00000546997 ERFEQ4G0M1 354 aa20.03■□□□□ 0.8
BRF1-208ENST00000546997 TTLL11Q8NHH1 800 aa20.03■□□□□ 0.8
BRF1-208ENST00000546997 OTUD7AQ8TE49 926 aaPredicted RBP20.03■□□□□ 0.8
BRF1-208ENST00000546997 COPRSQ9NQ92 184 aa20.03■□□□□ 0.8
BRF1-208ENST00000546997 ABCC12Q96J65 1359 aa20.03■□□□□ 0.8
BRF1-208ENST00000546997 RBM25P49756 843 aaKnown RBP20.03■□□□□ 0.8
BRF1-208ENST00000546997 TERF1P54274 439 aa20.03■□□□□ 0.8
BRF1-208ENST00000546997 ZMYND15Q9H091 742 aa20.03■□□□□ 0.8
BRF1-208ENST00000546997 CARMIL3Q8ND23 1372 aa20.02■□□□□ 0.8
BRF1-208ENST00000546997 NBPF5PQ86XG9 351 aaPredicted RBP20.02■□□□□ 0.8
BRF1-208ENST00000546997 TRIM44Q96DX7 344 aaPredicted RBP20.02■□□□□ 0.8
BRF1-208ENST00000546997 GBP4Q96PP9 640 aa20.02■□□□□ 0.8
BRF1-208ENST00000546997 GREM2Q9H772 168 aa20.02■□□□□ 0.8
BRF1-208ENST00000546997 IL1RAPL2Q9NP60 686 aa20.02■□□□□ 0.8
BRF1-208ENST00000546997 TAF1P21675 1872 aa20.02■□□□□ 0.8
BRF1-208ENST00000546997 RAB11FIP3O75154 756 aa20.01■□□□□ 0.79
BRF1-208ENST00000546997 OS9Q13438 667 aaPredicted RBP20.01■□□□□ 0.79
BRF1-208ENST00000546997 SLC15A2Q16348 729 aa20.01■□□□□ 0.79
BRF1-208ENST00000546997 RHPN1Q8TCX5 695 aa20.01■□□□□ 0.79
BRF1-208ENST00000546997 ZNF594Q96JF6 807 aaPredicted RBP20.01■□□□□ 0.79
BRF1-208ENST00000546997 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.01■□□□□ 0.79
BRF1-208ENST00000546997 SPEF2Q9C093 1822 aa20.01■□□□□ 0.79
BRF1-208ENST00000546997 TNRC6CQ9HCJ0 1690 aaKnown RBP20.01■□□□□ 0.79
BRF1-208ENST00000546997 GSPT1P15170 499 aaKnown RBP20.01■□□□□ 0.79
BRF1-208ENST00000546997 UPF1Q92900 1129 aaKnown RBP eCLIP20.01■□□□□ 0.792e-8■■■■■ 35.7
BRF1-208ENST00000546997 PODXL2Q9NZ53 605 aa20.01■□□□□ 0.79
BRF1-208ENST00000546997 HSP90AB4PQ58FF6 505 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms