RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, human

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NKX2-1-205	ENST00000546983	CCT4	P50991	539 aa	Known RBP	32.15	■■■□□ 2.74
NKX2-1-205	ENST00000546983	CTSW	P56202	376 aa		32.15	■■■□□ 2.74
NKX2-1-205	ENST00000546983	HDAC5	Q9UQL6	1122 aa		32.15	■■■□□ 2.74
NKX2-1-205	ENST00000546983	ATP6V0A2	Q9Y487	856 aa		32.15	■■■□□ 2.74
NKX2-1-205	ENST00000546983	ABCC4	O15439	1325 aa		32.15	■■■□□ 2.74
NKX2-1-205	ENST00000546983	GOLGB1	Q14789	3259 aa	Known RBP	32.14	■■■□□ 2.74
NKX2-1-205	ENST00000546983	NOB1	Q9ULX3	412 aa	Known RBP	32.14	■■■□□ 2.74
NKX2-1-205	ENST00000546983	LAMB2	P55268	1798 aa		32.14	■■■□□ 2.74
NKX2-1-205	ENST00000546983	SP8	Q8IXZ3	490 aa		32.13	■■■□□ 2.73
NKX2-1-205	ENST00000546983	CDC5L	Q99459	802 aa	Known RBP	32.13	■■■□□ 2.73
NKX2-1-205	ENST00000546983	RTL9	Q8NET4	1388 aa		32.12	■■■□□ 2.73
NKX2-1-205	ENST00000546983	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.12	■■■□□ 2.73
NKX2-1-205	ENST00000546983	PSMD1	Q99460	953 aa		32.12	■■■□□ 2.73
NKX2-1-205	ENST00000546983	ZNF219	Q9P2Y4	722 aa	Predicted RBP	32.12	■■■□□ 2.73
NKX2-1-205	ENST00000546983	VPS33B	Q9H267	617 aa		32.11	■■■□□ 2.73
NKX2-1-205	ENST00000546983	SLX4	Q8IY92	1834 aa		32.11	■■■□□ 2.73
NKX2-1-205	ENST00000546983	DDX60	Q8IY21	1712 aa	Known RBP	32.1	■■■□□ 2.73
NKX2-1-205	ENST00000546983	CASP7	P55210	303 aa		32.1	■■■□□ 2.73
NKX2-1-205	ENST00000546983	RPS8	P62241	208 aa	Known RBP	32.1	■■■□□ 2.73
NKX2-1-205	ENST00000546983	SUPT20H	Q8NEM7	779 aa		32.1	■■■□□ 2.73
NKX2-1-205	ENST00000546983	NFKBIE	O00221	500 aa		32.09	■■■□□ 2.73
NKX2-1-205	ENST00000546983	C9orf131	Q5VYM1	1079 aa		32.09	■■■□□ 2.73
NKX2-1-205	ENST00000546983	TTLL11	Q8NHH1	800 aa		32.09	■■■□□ 2.73
NKX2-1-205	ENST00000546983	RNF181	Q9P0P0	153 aa		32.09	■■■□□ 2.73
NKX2-1-205	ENST00000546983	UTY	O14607	1347 aa		32.08	■■■□□ 2.73
NKX2-1-205	ENST00000546983	ANKRD18A	Q8IVF6	992 aa		32.06	■■■□□ 2.72
NKX2-1-205	ENST00000546983	JARID2	Q92833	1246 aa	Predicted RBP	32.06	■■■□□ 2.72
NKX2-1-205	ENST00000546983	CSF1R	P07333	972 aa		32.05	■■■□□ 2.72
NKX2-1-205	ENST00000546983	ZKSCAN2	Q63HK3	967 aa		32.05	■■■□□ 2.72
NKX2-1-205	ENST00000546983	ATF7IP	Q6VMQ6	1270 aa		32.05	■■■□□ 2.72
NKX2-1-205	ENST00000546983	RASSF7	Q02833	373 aa		32.04	■■■□□ 2.72
NKX2-1-205	ENST00000546983	UTRN	P46939	3433 aa		32.04	■■■□□ 2.72
NKX2-1-205	ENST00000546983	MPND	Q8N594	471 aa		32.03	■■■□□ 2.72
NKX2-1-205	ENST00000546983	FER1L6	Q2WGJ9	1857 aa		32.02	■■■□□ 2.72
NKX2-1-205	ENST00000546983	MS4A1	P11836	297 aa		32.02	■■■□□ 2.72
NKX2-1-205	ENST00000546983	DPP8	Q6V1X1	898 aa	Predicted RBP	32.02	■■■□□ 2.72
NKX2-1-205	ENST00000546983	FRAT1	Q92837	279 aa	Predicted RBP	32.02	■■■□□ 2.72
NKX2-1-205	ENST00000546983	CELF1	Q92879	486 aa	Known RBP	32.02	■■■□□ 2.72
NKX2-1-205	ENST00000546983	BCAR3	O75815	825 aa		32.01	■■■□□ 2.71
NKX2-1-205	ENST00000546983	IGHMBP2	P38935	993 aa	Known RBP	32.01	■■■□□ 2.71
NKX2-1-205	ENST00000546983	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.01	■■■□□ 2.71
NKX2-1-205	ENST00000546983	INTS3	Q68E01	1043 aa	Known RBP	32	■■■□□ 2.71
NKX2-1-205	ENST00000546983	ANKRD18B	A2A2Z9	1011 aa		31.99	■■■□□ 2.71
NKX2-1-205	ENST00000546983	IFIT5	Q13325	482 aa	Known RBP	31.99	■■■□□ 2.71
NKX2-1-205	ENST00000546983	DPY19L2	Q6NUT2	758 aa		31.99	■■■□□ 2.71
NKX2-1-205	ENST00000546983	JDP2	Q8WYK2	163 aa		31.99	■■■□□ 2.71
NKX2-1-205	ENST00000546983	GREM2	Q9H772	168 aa		31.99	■■■□□ 2.71
NKX2-1-205	ENST00000546983	SEC31B	Q9NQW1	1179 aa		31.99	■■■□□ 2.71
NKX2-1-205	ENST00000546983	BSDC1	Q9NW68	430 aa	Predicted RBP	31.99	■■■□□ 2.71
NKX2-1-205	ENST00000546983	CACNA1S	Q13698	1873 aa		31.99	■■■□□ 2.71
NKX2-1-205	ENST00000546983	SNED1	Q8TER0	1413 aa		31.99	■■■□□ 2.71
NKX2-1-205	ENST00000546983	IARS	P41252	1262 aa	Known RBP	31.98	■■■□□ 2.71
NKX2-1-205	ENST00000546983	CCDC57	Q2TAC2	916 aa		31.98	■■■□□ 2.71
NKX2-1-205	ENST00000546983	USP44	Q9H0E7	712 aa		31.98	■■■□□ 2.71
NKX2-1-205	ENST00000546983	KDM2B	Q8NHM5	1336 aa		31.98	■■■□□ 2.71
NKX2-1-205	ENST00000546983	TRIM27	P14373	513 aa		31.97	■■■□□ 2.71
NKX2-1-205	ENST00000546983	ITGA6	P23229	1130 aa		31.97	■■■□□ 2.71
NKX2-1-205	ENST00000546983	FOXO4	P98177	505 aa		31.97	■■■□□ 2.71
NKX2-1-205	ENST00000546983	ZNF784	Q8NCA9	323 aa	Predicted RBP	31.97	■■■□□ 2.71
NKX2-1-205	ENST00000546983	MPHOSPH8	Q99549	860 aa		31.97	■■■□□ 2.71
NKX2-1-205	ENST00000546983	NBPF7	P0C2Y1	421 aa	Predicted RBP	31.96	■■■□□ 2.71
NKX2-1-205	ENST00000546983	PODXL2	Q9NZ53	605 aa		31.96	■■■□□ 2.71
NKX2-1-205	ENST00000546983	MYH3	P11055	1940 aa		31.96	■■■□□ 2.71
NKX2-1-205	ENST00000546983	GNAI3	P08754	354 aa		31.95	■■■□□ 2.71
NKX2-1-205	ENST00000546983	UBTFL1	P0CB47	393 aa	Predicted RBP	31.95	■■■□□ 2.71
NKX2-1-205	ENST00000546983	LMBR1L	Q6UX01	489 aa		31.95	■■■□□ 2.71
NKX2-1-205	ENST00000546983	FTSJ3	Q8IY81	847 aa	Known RBP	31.95	■■■□□ 2.71
NKX2-1-205	ENST00000546983	CCDC85A	Q96PX6	553 aa	Predicted RBP	31.95	■■■□□ 2.71
NKX2-1-205	ENST00000546983	EYA3	Q99504	573 aa		31.95	■■■□□ 2.71
NKX2-1-205	ENST00000546983	OLFM4	Q6UX06	510 aa		31.94	■■■□□ 2.7
NKX2-1-205	ENST00000546983	ZNF277	Q9NRM2	450 aa	Predicted RBP	31.94	■■■□□ 2.7
NKX2-1-205	ENST00000546983	RCAN3	Q9UKA8	241 aa		31.94	■■■□□ 2.7
NKX2-1-205	ENST00000546983	NSFL1C	Q9UNZ2	370 aa	Known RBP	31.94	■■■□□ 2.7
NKX2-1-205	ENST00000546983	CHMP3	Q9Y3E7	222 aa		31.94	■■■□□ 2.7
NKX2-1-205	ENST00000546983	FAM161A	Q3B820	660 aa		31.93	■■■□□ 2.7
NKX2-1-205	ENST00000546983	GPBP1L1	Q9HC44	474 aa	Predicted RBP	31.93	■■■□□ 2.7
NKX2-1-205	ENST00000546983	RABL6	Q3YEC7	729 aa	Predicted RBP	31.92	■■■□□ 2.7
NKX2-1-205	ENST00000546983	TAF7L	Q5H9L4	462 aa		31.92	■■■□□ 2.7
NKX2-1-205	ENST00000546983	SUCLG2	Q96I99	432 aa		31.92	■■■□□ 2.7
NKX2-1-205	ENST00000546983	ANKIB1	Q9P2G1	1089 aa		31.92	■■■□□ 2.7
NKX2-1-205	ENST00000546983	XDH	P47989	1333 aa		31.92	■■■□□ 2.7
NKX2-1-205	ENST00000546983	SBF1	O95248	1867 aa		31.91	■■■□□ 2.7
NKX2-1-205	ENST00000546983	LARGE2	Q8N3Y3	721 aa		31.91	■■■□□ 2.7
NKX2-1-205	ENST00000546983	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	31.91	■■■□□ 2.7
NKX2-1-205	ENST00000546983	ANKRD2	Q9GZV1	360 aa		31.91	■■■□□ 2.7
NKX2-1-205	ENST00000546983	LRRC37A	A6NMS7	1700 aa		31.9	■■■□□ 2.7
NKX2-1-205	ENST00000546983	DZIP1L	Q8IYY4	767 aa	Known RBP	31.9	■■■□□ 2.7
NKX2-1-205	ENST00000546983	GLTPD2	A6NH11	291 aa		31.89	■■■□□ 2.7
NKX2-1-205	ENST00000546983	PPIP5K2	O43314	1243 aa		31.89	■■■□□ 2.7
NKX2-1-205	ENST00000546983	PRELP	P51888	382 aa		31.89	■■■□□ 2.7
NKX2-1-205	ENST00000546983	GGA1	Q9UJY5	639 aa		31.89	■■■□□ 2.7
NKX2-1-205	ENST00000546983	ATP2B4	P23634	1241 aa		31.88	■■■□□ 2.69
NKX2-1-205	ENST00000546983	KIAA2012	Q0VF49	1180 aa		31.88	■■■□□ 2.69
NKX2-1-205	ENST00000546983	NIM1K	Q8IY84	436 aa		31.88	■■■□□ 2.69
NKX2-1-205	ENST00000546983	BICC1	Q9H694	974 aa	Known RBP	31.88	■■■□□ 2.69
NKX2-1-205	ENST00000546983	WASHC4	Q2M389	1173 aa		31.87	■■■□□ 2.69
NKX2-1-205	ENST00000546983	C6orf229	H3BNL8	230 aa		31.86	■■■□□ 2.69
NKX2-1-205	ENST00000546983	EIF6	P56537	245 aa	Known RBP	31.86	■■■□□ 2.69
NKX2-1-205	ENST00000546983	EPHA10	Q5JZY3	1008 aa		31.86	■■■□□ 2.69
NKX2-1-205	ENST00000546983	MINPP1	Q9UNW1	487 aa		31.86	■■■□□ 2.69

Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms