RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 IGKV5-2P06315 115 aa18.89■□□□□ 0.61
CCDC38-205ENST00000546947 IARSP41252 1262 aaKnown RBP18.89■□□□□ 0.61
CCDC38-205ENST00000546947 FKBP5Q13451 457 aaPredicted RBP18.89■□□□□ 0.61
CCDC38-205ENST00000546947 TMC4Q7Z404 712 aa18.89■□□□□ 0.61
CCDC38-205ENST00000546947 RRAGCQ9HB90 399 aa18.89■□□□□ 0.61
CCDC38-205ENST00000546947 LRRC37AA6NMS7 1700 aa18.88■□□□□ 0.61
CCDC38-205ENST00000546947 PDE8AO60658 829 aa18.88■□□□□ 0.61
CCDC38-205ENST00000546947 TOMM70O94826 608 aa18.88■□□□□ 0.61
CCDC38-205ENST00000546947 SP8Q8IXZ3 490 aa18.88■□□□□ 0.61
CCDC38-205ENST00000546947 C16orf71Q8IYS4 520 aaPredicted RBP18.88■□□□□ 0.61
CCDC38-205ENST00000546947 CDHR2Q9BYE9 1310 aa18.88■□□□□ 0.61
CCDC38-205ENST00000546947 NEURL1BA8MQ27 555 aa18.87■□□□□ 0.61
CCDC38-205ENST00000546947 DNAAF4Q8WXU2 420 aa18.87■□□□□ 0.61
CCDC38-205ENST00000546947 VEGFAP15692 232 aaPredicted RBP18.86■□□□□ 0.61
CCDC38-205ENST00000546947 SLFN5Q08AF3 891 aa18.86■□□□□ 0.61
CCDC38-205ENST00000546947 VPS33BQ9H267 617 aa18.86■□□□□ 0.61
CCDC38-205ENST00000546947 CWF19L2Q2TBE0 894 aaKnown RBP18.85■□□□□ 0.61
CCDC38-205ENST00000546947 SLC51AQ86UW1 340 aa18.85■□□□□ 0.61
CCDC38-205ENST00000546947 SUPT20HQ8NEM7 779 aa18.85■□□□□ 0.61
CCDC38-205ENST00000546947 JDP2Q8WYK2 163 aa18.85■□□□□ 0.61
CCDC38-205ENST00000546947 FZD9O00144 591 aa18.84■□□□□ 0.61
CCDC38-205ENST00000546947 CCDC152Q4G0S7 254 aa18.84■□□□□ 0.61
CCDC38-205ENST00000546947 MPNDQ8N594 471 aa18.84■□□□□ 0.61
CCDC38-205ENST00000546947 LINS1Q8NG48 757 aa18.84■□□□□ 0.61
CCDC38-205ENST00000546947 RBM46Q8TBY0 533 aaKnown RBP18.84■□□□□ 0.61
CCDC38-205ENST00000546947 CELF1Q92879 486 aaKnown RBP18.84■□□□□ 0.61
CCDC38-205ENST00000546947 RTFDC1Q9BY42 306 aaPredicted RBP18.84■□□□□ 0.61
CCDC38-205ENST00000546947 SCN4AP35499 1836 aa18.84■□□□□ 0.61
CCDC38-205ENST00000546947 DDNO94850 711 aaPredicted RBP18.83■□□□□ 0.6
CCDC38-205ENST00000546947 GCKRQ14397 625 aa18.83■□□□□ 0.6
CCDC38-205ENST00000546947 DPP8Q6V1X1 898 aaPredicted RBP18.83■□□□□ 0.6
CCDC38-205ENST00000546947 MIER1Q8N108 512 aa18.83■□□□□ 0.6
CCDC38-205ENST00000546947 JARID2Q92833 1246 aaPredicted RBP18.83■□□□□ 0.6
CCDC38-205ENST00000546947 POTECB2RU33 542 aa18.82■□□□□ 0.6
CCDC38-205ENST00000546947 H7C1W4 665 aa18.82■□□□□ 0.6
CCDC38-205ENST00000546947 LARGE2Q8N3Y3 721 aa18.82■□□□□ 0.6
CCDC38-205ENST00000546947 COL4A1P02462 1669 aa18.82■□□□□ 0.6
CCDC38-205ENST00000546947 COL4A5P29400 1685 aa18.82■□□□□ 0.6
CCDC38-205ENST00000546947 ZNF541Q9H0D2 1346 aa18.81■□□□□ 0.6
CCDC38-205ENST00000546947 CTSWP56202 376 aa18.81■□□□□ 0.6
CCDC38-205ENST00000546947 RPS8P62241 208 aaKnown RBP18.81■□□□□ 0.6
CCDC38-205ENST00000546947 TRMT2AQ8IZ69 625 aaKnown RBP18.81■□□□□ 0.6
CCDC38-205ENST00000546947 PPIP5K2O43314 1243 aa18.8■□□□□ 0.6
CCDC38-205ENST00000546947 EIF6P56537 245 aaKnown RBP18.8■□□□□ 0.6
CCDC38-205ENST00000546947 FSTL1Q12841 308 aa18.8■□□□□ 0.6
CCDC38-205ENST00000546947 NIM1KQ8IY84 436 aa18.8■□□□□ 0.6
CCDC38-205ENST00000546947 CDCA7LQ96GN5 454 aa18.8■□□□□ 0.6
CCDC38-205ENST00000546947 L3MBTL3Q96JM7 780 aaPredicted RBP18.8■□□□□ 0.6
CCDC38-205ENST00000546947 SEC31BQ9NQW1 1179 aa18.8■□□□□ 0.6
CCDC38-205ENST00000546947 DUOX1Q9NRD9 1551 aa18.8■□□□□ 0.6
CCDC38-205ENST00000546947 LTBP1Q14766 1721 aa18.8■□□□□ 0.6
CCDC38-205ENST00000546947 IQCA1LA6NCM1 817 aa18.79■□□□□ 0.6
CCDC38-205ENST00000546947 F6X3S4 739 aa18.79■□□□□ 0.6
CCDC38-205ENST00000546947 HSPA6P17066 643 aa18.79■□□□□ 0.6
CCDC38-205ENST00000546947 AOC3Q16853 763 aa18.79■□□□□ 0.6
CCDC38-205ENST00000546947 BEND3Q5T5X7 828 aa18.79■□□□□ 0.6
CCDC38-205ENST00000546947 UBE3BQ7Z3V4 1068 aa18.79■□□□□ 0.6
CCDC38-205ENST00000546947 TTLL11Q8NHH1 800 aa18.79■□□□□ 0.6
CCDC38-205ENST00000546947 PLA2G12BQ9BX93 195 aa18.79■□□□□ 0.6
CCDC38-205ENST00000546947 CASP7P55210 303 aa18.78■□□□□ 0.6
CCDC38-205ENST00000546947 KIAA2012Q0VF49 1180 aa18.78■□□□□ 0.6
CCDC38-205ENST00000546947 GPC2Q8N158 579 aa18.78■□□□□ 0.6
CCDC38-205ENST00000546947 MRPL50Q8N5N7 158 aaKnown RBP18.78■□□□□ 0.6
CCDC38-205ENST00000546947 SMC1BQ8NDV3 1235 aa18.78■□□□□ 0.6
CCDC38-205ENST00000546947 SPEF2Q9C093 1822 aa18.78■□□□□ 0.6
CCDC38-205ENST00000546947 RTL9Q8NET4 1388 aa18.78■□□□□ 0.6
CCDC38-205ENST00000546947 CT47B1P0C2W7 299 aaPredicted RBP18.77■□□□□ 0.6
CCDC38-205ENST00000546947 ALDH1L2Q3SY69 923 aa18.77■□□□□ 0.6
CCDC38-205ENST00000546947 ANKRD18AQ8IVF6 992 aa18.77■□□□□ 0.6
CCDC38-205ENST00000546947 CCDC85AQ96PX6 553 aaPredicted RBP18.77■□□□□ 0.6
CCDC38-205ENST00000546947 CDC5LQ99459 802 aaKnown RBP18.77■□□□□ 0.6
CCDC38-205ENST00000546947 NSFL1CQ9UNZ2 370 aaKnown RBP18.77■□□□□ 0.6
CCDC38-205ENST00000546947 PTPRCP08575 1304 aa18.76■□□□□ 0.59
CCDC38-205ENST00000546947 ALDH1L1O75891 902 aa18.75■□□□□ 0.59
CCDC38-205ENST00000546947 GPSM2P81274 684 aa18.75■□□□□ 0.59
CCDC38-205ENST00000546947 SSH1Q8WYL5 1049 aa18.75■□□□□ 0.59
CCDC38-205ENST00000546947 EYA3Q99504 573 aa18.75■□□□□ 0.59
CCDC38-205ENST00000546947 PODXL2Q9NZ53 605 aa18.75■□□□□ 0.59
CCDC38-205ENST00000546947 ZNRF3Q9ULT6 936 aa18.75■□□□□ 0.59
CCDC38-205ENST00000546947 SLC4A10Q6U841 1118 aa18.74■□□□□ 0.59
CCDC38-205ENST00000546947 TAF1DQ9H5J8 278 aaPredicted RBP18.74■□□□□ 0.59
CCDC38-205ENST00000546947 GREM2Q9H772 168 aa18.74■□□□□ 0.59
CCDC38-205ENST00000546947 POLLQ9UGP5 575 aa18.74■□□□□ 0.59
CCDC38-205ENST00000546947 HACL1Q9UJ83 578 aa18.74■□□□□ 0.59
CCDC38-205ENST00000546947 C6orf229H3BNL8 230 aa18.73■□□□□ 0.59
CCDC38-205ENST00000546947 CSF1RP07333 972 aa18.73■□□□□ 0.59
CCDC38-205ENST00000546947 WASHC4Q2M389 1173 aa18.73■□□□□ 0.59
CCDC38-205ENST00000546947 TBC1D16Q8TBP0 767 aa18.73■□□□□ 0.59
CCDC38-205ENST00000546947 SRCIN1Q9C0H9 1055 aa18.73■□□□□ 0.59
CCDC38-205ENST00000546947 GJA3Q9Y6H8 435 aa18.73■□□□□ 0.59
CCDC38-205ENST00000546947 GRM8O00222 908 aa18.72■□□□□ 0.59
CCDC38-205ENST00000546947 APLP1P51693 650 aa18.72■□□□□ 0.59
CCDC38-205ENST00000546947 BSDC1Q9NW68 430 aaPredicted RBP18.72■□□□□ 0.59
CCDC38-205ENST00000546947 ANKIB1Q9P2G1 1089 aa18.72■□□□□ 0.59
CCDC38-205ENST00000546947 GGA1Q9UJY5 639 aa18.72■□□□□ 0.59
CCDC38-205ENST00000546947 IGHMBP2P38935 993 aaKnown RBP18.71■□□□□ 0.59
CCDC38-205ENST00000546947 CXCL9Q07325 125 aa18.71■□□□□ 0.59
CCDC38-205ENST00000546947 SMC4Q9NTJ3 1288 aa18.71■□□□□ 0.59
CCDC38-205ENST00000546947 C9orf78Q9NZ63 289 aaPredicted RBP18.71■□□□□ 0.59
CCDC38-205ENST00000546947 CEP350Q5VT06 3117 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms