RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 ZBTB38Q8NAP3 1195 aaPredicted RBP33.95■■■■□ 3.03
SRSF9-202ENST00000546942 L3MBTL3Q96JM7 780 aaPredicted RBP33.95■■■■□ 3.03
SRSF9-202ENST00000546942 GJA3Q9Y6H8 435 aa33.95■■■■□ 3.03
SRSF9-202ENST00000546942 SCN4AP35499 1836 aa33.95■■■■□ 3.02
SRSF9-202ENST00000546942 PI4KAP2A4QPH2 592 aa33.94■■■■□ 3.02
SRSF9-202ENST00000546942 SLC4A2P04920 1241 aa33.94■■■■□ 3.02
SRSF9-202ENST00000546942 EIF6P56537 245 aaKnown RBP33.94■■■■□ 3.02
SRSF9-202ENST00000546942 SF3B3Q15393 1217 aaKnown RBP33.94■■■■□ 3.02
SRSF9-202ENST00000546942 AOC3Q16853 763 aa33.94■■■■□ 3.02
SRSF9-202ENST00000546942 MPNDQ8N594 471 aa33.94■■■■□ 3.02
SRSF9-202ENST00000546942 PI4KAP1Q8N8J0 262 aa33.94■■■■□ 3.02
SRSF9-202ENST00000546942 CCDC191Q8NCU4 936 aa33.94■■■■□ 3.02
SRSF9-202ENST00000546942 CWC25Q9NXE8 425 aaPredicted RBP33.94■■■■□ 3.02
SRSF9-202ENST00000546942 KSR2Q6VAB6 950 aa33.93■■■■□ 3.02
SRSF9-202ENST00000546942 G2E3Q7L622 706 aa33.93■■■■□ 3.02
SRSF9-202ENST00000546942 NIM1KQ8IY84 436 aa33.92■■■■□ 3.02
SRSF9-202ENST00000546942 CELF1Q92879 486 aaKnown RBP33.92■■■■□ 3.02
SRSF9-202ENST00000546942 EXOSC9Q06265 439 aaKnown RBP33.91■■■■□ 3.02
SRSF9-202ENST00000546942 GPC2Q8N158 579 aa33.91■■■■□ 3.02
SRSF9-202ENST00000546942 SUPT20HQ8NEM7 779 aa33.91■■■■□ 3.02
SRSF9-202ENST00000546942 TAF1DQ9H5J8 278 aaPredicted RBP33.91■■■■□ 3.02
SRSF9-202ENST00000546942 HACL1Q9UJ83 578 aa33.91■■■■□ 3.02
SRSF9-202ENST00000546942 EAPPQ56P03 285 aaPredicted RBP33.9■■■■□ 3.02
SRSF9-202ENST00000546942 CHADLQ6NUI6 762 aa33.89■■■■□ 3.02
SRSF9-202ENST00000546942 DNAJC5GQ8N7S2 189 aa33.89■■■■□ 3.02
SRSF9-202ENST00000546942 SPINK5Q9NQ38 1064 aaPredicted RBP33.89■■■■□ 3.02
SRSF9-202ENST00000546942 PCCAP05165 728 aaPredicted RBP33.88■■■■□ 3.01
SRSF9-202ENST00000546942 TMC4Q7Z404 712 aa33.88■■■■□ 3.01
SRSF9-202ENST00000546942 RTFDC1Q9BY42 306 aaPredicted RBP33.88■■■■□ 3.01
SRSF9-202ENST00000546942 HSP90B1P14625 803 aaKnown RBP33.87■■■■□ 3.01
SRSF9-202ENST00000546942 NEXNQ0ZGT2 675 aa33.87■■■■□ 3.01
SRSF9-202ENST00000546942 VAMP4O75379 141 aa33.86■■■■□ 3.01
SRSF9-202ENST00000546942 EPHX2P34913 555 aa33.86■■■■□ 3.01
SRSF9-202ENST00000546942 CCDC85AQ96PX6 553 aaPredicted RBP33.86■■■■□ 3.01
SRSF9-202ENST00000546942 CLEC11AQ9Y240 323 aa33.86■■■■□ 3.01
SRSF9-202ENST00000546942 COL4A1P02462 1669 aa33.86■■■■□ 3.01
SRSF9-202ENST00000546942 IGKV5-2P06315 115 aa33.85■■■■□ 3.01
SRSF9-202ENST00000546942 VPS33BQ9H267 617 aa33.85■■■■□ 3.01
SRSF9-202ENST00000546942 PDE8AO60658 829 aa33.84■■■■□ 3.01
SRSF9-202ENST00000546942 FLIIQ13045 1269 aa33.84■■■■□ 3.01
SRSF9-202ENST00000546942 CWF19L2Q2TBE0 894 aaKnown RBP33.84■■■■□ 3.01
SRSF9-202ENST00000546942 SEC31BQ9NQW1 1179 aa33.84■■■■□ 3.01
SRSF9-202ENST00000546942 NSFL1CQ9UNZ2 370 aaKnown RBP33.84■■■■□ 3.01
SRSF9-202ENST00000546942 LRRC37AA6NMS7 1700 aa33.83■■■■□ 3.01
SRSF9-202ENST00000546942 RPS8P62241 208 aaKnown RBP33.83■■■■□ 3.01
SRSF9-202ENST00000546942 LDHDQ86WU2 507 aa33.83■■■■□ 3.01
SRSF9-202ENST00000546942 MYH16Q9H6N6 1097 aa33.83■■■■□ 3.01
SRSF9-202ENST00000546942 CACNA1FO60840 1977 aa33.82■■■■□ 3
SRSF9-202ENST00000546942 FKBP5Q13451 457 aaPredicted RBP33.82■■■■□ 3
SRSF9-202ENST00000546942 CCDC152Q4G0S7 254 aa33.82■■■■□ 3
SRSF9-202ENST00000546942 ZNRF3Q9ULT6 936 aa33.82■■■■□ 3
SRSF9-202ENST00000546942 LMOD1P29536 600 aaPredicted RBP33.81■■■■□ 3
SRSF9-202ENST00000546942 KIAA2012Q0VF49 1180 aa33.81■■■■□ 3
SRSF9-202ENST00000546942 NEURL1BA8MQ27 555 aa33.79■■■■□ 3
SRSF9-202ENST00000546942 C6orf229H3BNL8 230 aa33.79■■■■□ 3
SRSF9-202ENST00000546942 GPSM2P81274 684 aa33.79■■■■□ 3
SRSF9-202ENST00000546942 DUOX1Q9NRD9 1551 aa33.78■■■■□ 3
SRSF9-202ENST00000546942 CXCL9Q07325 125 aa33.78■■■■□ 3
SRSF9-202ENST00000546942 PNMA8AQ86V59 439 aaPredicted RBP33.78■■■■□ 3
SRSF9-202ENST00000546942 KLRG1Q96E93 195 aa33.78■■■■□ 3
SRSF9-202ENST00000546942 RIMBP2O15034 1052 aa33.77■■■■□ 3
SRSF9-202ENST00000546942 EPS15P42566 896 aa33.77■■■■□ 3
SRSF9-202ENST00000546942 SCNN1DP51172 638 aa33.77■■■■□ 3
SRSF9-202ENST00000546942 WASHC4Q2M389 1173 aa33.77■■■■□ 3
SRSF9-202ENST00000546942 CDHR2Q9BYE9 1310 aa33.77■■■■□ 3
SRSF9-202ENST00000546942 LTBP1Q14766 1721 aa33.76■■■■□ 3
SRSF9-202ENST00000546942 RAD17O75943 681 aa33.76■■■□□ 2.99
SRSF9-202ENST00000546942 DNAAF4Q8WXU2 420 aa33.75■■■□□ 2.99
SRSF9-202ENST00000546942 POLLQ9UGP5 575 aa33.75■■■□□ 2.99
SRSF9-202ENST00000546942 MYH3P11055 1940 aa33.75■■■□□ 2.99
SRSF9-202ENST00000546942 UBE3BQ7Z3V4 1068 aa33.74■■■□□ 2.99
SRSF9-202ENST00000546942 GPR101Q96P66 508 aaPredicted RBP33.74■■■□□ 2.99
SRSF9-202ENST00000546942 CTSWP56202 376 aa33.73■■■□□ 2.99
SRSF9-202ENST00000546942 MAP1SQ66K74 1059 aaPredicted RBP33.73■■■□□ 2.99
SRSF9-202ENST00000546942 CIAPIN1Q6FI81 312 aa33.73■■■□□ 2.99
SRSF9-202ENST00000546942 ANKIB1Q9P2G1 1089 aa33.73■■■□□ 2.99
SRSF9-202ENST00000546942 ADAMTSL1Q8N6G6 1762 aa33.72■■■□□ 2.99
SRSF9-202ENST00000546942 GCKRQ14397 625 aa33.71■■■□□ 2.99
SRSF9-202ENST00000546942 ANKRD18AQ8IVF6 992 aa33.71■■■□□ 2.99
SRSF9-202ENST00000546942 TBC1D16Q8TBP0 767 aa33.71■■■□□ 2.99
SRSF9-202ENST00000546942 DBNDD1Q9H9R9 158 aa33.71■■■□□ 2.99
SRSF9-202ENST00000546942 YDJCA8MPS7 323 aa33.7■■■□□ 2.99
SRSF9-202ENST00000546942 H7C1W4 665 aa33.7■■■□□ 2.99
SRSF9-202ENST00000546942 GMPSP49915 693 aaPredicted RBP33.7■■■□□ 2.99
SRSF9-202ENST00000546942 TNIP1Q15025 636 aa33.7■■■□□ 2.99
SRSF9-202ENST00000546942 TTLL11Q8NHH1 800 aa33.7■■■□□ 2.99
SRSF9-202ENST00000546942 EYA3Q99504 573 aa33.7■■■□□ 2.99
SRSF9-202ENST00000546942 BCL2L13Q9BXK5 485 aa33.7■■■□□ 2.99
SRSF9-202ENST00000546942 SPEF2Q9C093 1822 aa33.69■■■□□ 2.98
SRSF9-202ENST00000546942 F6X3S4 739 aa33.69■■■□□ 2.98
SRSF9-202ENST00000546942 DOK7Q18PE1 504 aa33.69■■■□□ 2.98
SRSF9-202ENST00000546942 GREM2Q9H772 168 aa33.69■■■□□ 2.98
SRSF9-202ENST00000546942 ZNF521Q96K83 1311 aa33.69■■■□□ 2.98
SRSF9-202ENST00000546942 UFL1O94874 794 aa33.68■■■□□ 2.98
SRSF9-202ENST00000546942 ITGBL1O95965 494 aaPredicted RBP33.68■■■□□ 2.98
SRSF9-202ENST00000546942 CNTROBQ8N137 903 aa33.68■■■□□ 2.98
SRSF9-202ENST00000546942 LINS1Q8NG48 757 aa33.68■■■□□ 2.98
SRSF9-202ENST00000546942 GPRC5DQ9NZD1 345 aa33.68■■■□□ 2.98
SRSF9-202ENST00000546942 CDC5LQ99459 802 aaKnown RBP33.67■■■□□ 2.98
SRSF9-202ENST00000546942 PASKQ96RG2 1323 aa33.67■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms