RNA–Protein interactions for RNA: ENST00000546882.5

RFX4-207, Transcript of regulatory factor X4, humanhuman

TSL 3

Gene RFX4, Length 660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-207ENST00000546882 FOXK1P85037 733 aa11.71□□□□□ -0.53
RFX4-207ENST00000546882 DSG2Q14126 1118 aa11.71□□□□□ -0.53
RFX4-207ENST00000546882 BCORQ6W2J9 1755 aa11.71□□□□□ -0.54
RFX4-207ENST00000546882 IL6STP40189 918 aaPredicted RBP11.7□□□□□ -0.54
RFX4-207ENST00000546882 SCNN1DP51172 638 aa11.7□□□□□ -0.54
RFX4-207ENST00000546882 BRPF1P55201 1214 aaPredicted RBP11.7□□□□□ -0.54
RFX4-207ENST00000546882 PRPF38BQ5VTL8 546 aaKnown RBP11.7□□□□□ -0.54
RFX4-207ENST00000546882 SAPCD2Q86UD0 394 aa11.7□□□□□ -0.54
RFX4-207ENST00000546882 RTKN2Q8IZC4 609 aa11.7□□□□□ -0.54
RFX4-207ENST00000546882 SYNE4Q8N205 404 aa11.7□□□□□ -0.54
RFX4-207ENST00000546882 PLPP6Q8IY26 295 aa11.69□□□□□ -0.54
RFX4-207ENST00000546882 ZNF496Q96IT1 587 aaPredicted RBP11.69□□□□□ -0.54
RFX4-207ENST00000546882 A1BGP04217 495 aa11.68□□□□□ -0.54
RFX4-207ENST00000546882 HOXB1P14653 301 aaPredicted RBP11.68□□□□□ -0.54
RFX4-207ENST00000546882 EMP3P54852 163 aa11.68□□□□□ -0.54
RFX4-207ENST00000546882 SOX10P56693 466 aa11.68□□□□□ -0.54
RFX4-207ENST00000546882 CIAPIN1Q6FI81 312 aa11.68□□□□□ -0.54
RFX4-207ENST00000546882 HHIPL1Q96JK4 782 aa11.68□□□□□ -0.54
RFX4-207ENST00000546882 ZIC5Q96T25 663 aa11.68□□□□□ -0.54
RFX4-207ENST00000546882 PSMD1Q99460 953 aa11.68□□□□□ -0.54
RFX4-207ENST00000546882 ZSWIM6Q9HCJ5 1215 aa11.68□□□□□ -0.54
RFX4-207ENST00000546882 ZNF330Q9Y3S2 320 aaPredicted RBP11.68□□□□□ -0.54
RFX4-207ENST00000546882 GJA3Q9Y6H8 435 aa11.68□□□□□ -0.54
RFX4-207ENST00000546882 HEG1Q9ULI3 1381 aa11.67□□□□□ -0.54
RFX4-207ENST00000546882 NPHP1O15259 732 aa11.67□□□□□ -0.54
RFX4-207ENST00000546882 MTHFSDQ2M296 383 aaKnown RBP11.67□□□□□ -0.54
RFX4-207ENST00000546882 GPR153Q6NV75 609 aa11.67□□□□□ -0.54
RFX4-207ENST00000546882 USP50Q70EL3 339 aaPredicted RBP11.67□□□□□ -0.54
RFX4-207ENST00000546882 TEX13AQ9BXU3 409 aaPredicted RBP11.67□□□□□ -0.54
RFX4-207ENST00000546882 PDE4AP27815 886 aa11.66□□□□□ -0.54
RFX4-207ENST00000546882 LMOD1P29536 600 aaPredicted RBP11.66□□□□□ -0.54
RFX4-207ENST00000546882 ZNF790Q6PG37 636 aa11.66□□□□□ -0.54
RFX4-207ENST00000546882 NBPF5PQ86XG9 351 aaPredicted RBP11.66□□□□□ -0.54
RFX4-207ENST00000546882 JDP2Q8WYK2 163 aa11.66□□□□□ -0.54
RFX4-207ENST00000546882 SIPA1L3O60292 1781 aaPredicted RBP11.65□□□□□ -0.54
RFX4-207ENST00000546882 CELF2O95319 508 aaKnown RBP11.65□□□□□ -0.54
RFX4-207ENST00000546882 EIF6P56537 245 aaKnown RBP11.65□□□□□ -0.54
RFX4-207ENST00000546882 ARSIQ5FYB1 569 aa11.65□□□□□ -0.54
RFX4-207ENST00000546882 CLEC4GQ6UXB4 293 aa11.65□□□□□ -0.54
RFX4-207ENST00000546882 DZIP3Q86Y13 1208 aaKnown RBP11.65□□□□□ -0.54
RFX4-207ENST00000546882 TTC5Q8N0Z6 440 aa11.65□□□□□ -0.54
RFX4-207ENST00000546882 KHSRPQ92945 711 aaKnown RBP eCLIP11.65□□□□□ -0.54
RFX4-207ENST00000546882 ALDH1B1P30837 517 aa11.64□□□□□ -0.55
RFX4-207ENST00000546882 PPP1R15BQ5SWA1 713 aa11.64□□□□□ -0.55
RFX4-207ENST00000546882 LARP6Q9BRS8 491 aaKnown RBP11.64□□□□□ -0.55
RFX4-207ENST00000546882 PGAP2Q9UHJ9 254 aa11.64□□□□□ -0.55
RFX4-207ENST00000546882 HMOX1P09601 288 aa11.63□□□□□ -0.55
RFX4-207ENST00000546882 TPTE2Q6XPS3 522 aa11.63□□□□□ -0.55
RFX4-207ENST00000546882 SLC51AQ86UW1 340 aa11.63□□□□□ -0.55
RFX4-207ENST00000546882 IL17REQ8NFR9 667 aa11.63□□□□□ -0.55
RFX4-207ENST00000546882 GLIS2Q9BZE0 524 aaPredicted RBP11.63□□□□□ -0.55
RFX4-207ENST00000546882 PIP4K2AP48426 406 aaPredicted RBP11.62□□□□□ -0.55
RFX4-207ENST00000546882 NOGQ13253 232 aa11.62□□□□□ -0.55
RFX4-207ENST00000546882 CRY2Q49AN0 593 aa11.62□□□□□ -0.55
RFX4-207ENST00000546882 MORC1Q86VD1 984 aa11.62□□□□□ -0.55
RFX4-207ENST00000546882 PANK3Q9H999 370 aa11.62□□□□□ -0.55
RFX4-207ENST00000546882 ADARB2Q9NS39 739 aaKnown RBP11.62□□□□□ -0.55
RFX4-207ENST00000546882 GPRC5DQ9NZD1 345 aa11.62□□□□□ -0.55
RFX4-207ENST00000546882 USP16Q9Y5T5 823 aa11.62□□□□□ -0.55
RFX4-207ENST00000546882 KCNQ3O43525 872 aa11.61□□□□□ -0.55
RFX4-207ENST00000546882 MFSD10Q14728 455 aa11.61□□□□□ -0.55
RFX4-207ENST00000546882 CC2D2BQ6DHV5 1058 aa11.61□□□□□ -0.55
RFX4-207ENST00000546882 NPM2Q86SE8 214 aaKnown RBP11.61□□□□□ -0.55
RFX4-207ENST00000546882 LARGE2Q8N3Y3 721 aa11.61□□□□□ -0.55
RFX4-207ENST00000546882 FMNL2Q96PY5 1086 aa11.61□□□□□ -0.55
RFX4-207ENST00000546882 NIP7Q9Y221 180 aaKnown RBP eCLIP11.61□□□□□ -0.55
RFX4-207ENST00000546882 PCDHGA4Q9Y5G9 962 aa11.61□□□□□ -0.55
RFX4-207ENST00000546882 FAM205CA6NFA0 338 aa11.6□□□□□ -0.55
RFX4-207ENST00000546882 FAM155AB1AL88 458 aaPredicted RBP11.6□□□□□ -0.55
RFX4-207ENST00000546882 HIRAP54198 1017 aaPredicted RBP11.6□□□□□ -0.55
RFX4-207ENST00000546882 DDX27Q96GQ7 796 aaKnown RBP11.6□□□□□ -0.55
RFX4-207ENST00000546882 SAGE1Q9NXZ1 904 aa11.6□□□□□ -0.55
RFX4-207ENST00000546882 POTEB3A0JP26 581 aa11.59□□□□□ -0.55
RFX4-207ENST00000546882 PRAMEF22A3QJZ6 481 aa11.59□□□□□ -0.55
RFX4-207ENST00000546882 FAM177BA6PVY3 158 aa11.59□□□□□ -0.55
RFX4-207ENST00000546882 HOXA10P31260 410 aaPredicted RBP11.59□□□□□ -0.55
RFX4-207ENST00000546882 CXCL9Q07325 125 aa11.59□□□□□ -0.55
RFX4-207ENST00000546882 TEFQ10587 303 aa11.59□□□□□ -0.55
RFX4-207ENST00000546882 POTEBQ6S5H4 581 aa11.59□□□□□ -0.55
RFX4-207ENST00000546882 POLR3GLQ9BT43 218 aa11.59□□□□□ -0.55
RFX4-207ENST00000546882 ZNF408Q9H9D4 720 aa11.59□□□□□ -0.55
RFX4-207ENST00000546882 ZNF652Q9Y2D9 606 aa11.59□□□□□ -0.55
RFX4-207ENST00000546882 AKAP11Q9UKA4 1901 aa11.58□□□□□ -0.55
RFX4-207ENST00000546882 ABCC12Q96J65 1359 aa11.58□□□□□ -0.56
RFX4-207ENST00000546882 NPC1L1Q9UHC9 1359 aa11.58□□□□□ -0.56
RFX4-207ENST00000546882 NBPF26B4DH59 902 aa11.58□□□□□ -0.56
RFX4-207ENST00000546882 HUNKP57058 714 aa11.58□□□□□ -0.56
RFX4-207ENST00000546882 HLFQ16534 295 aa11.58□□□□□ -0.56
RFX4-207ENST00000546882 NBPF10Q6P3W6 841 aaKnown RBP11.58□□□□□ -0.56
RFX4-207ENST00000546882 DLK2Q6UY11 383 aa11.58□□□□□ -0.56
RFX4-207ENST00000546882 NBPF15Q8N660 670 aa11.58□□□□□ -0.56
RFX4-207ENST00000546882 ZC3H15Q8WU90 426 aaKnown RBP11.58□□□□□ -0.56
RFX4-207ENST00000546882 HS3ST6Q96QI5 342 aa11.58□□□□□ -0.56
RFX4-207ENST00000546882 POLR2AP24928 1970 aaKnown RBP11.58□□□□□ -0.56
RFX4-207ENST00000546882 CEMIPQ8WUJ3 1361 aa11.57□□□□□ -0.56
RFX4-207ENST00000546882 TRPA1O75762 1119 aa11.57□□□□□ -0.56
RFX4-207ENST00000546882 NUDT7P0C024 238 aa11.57□□□□□ -0.56
RFX4-207ENST00000546882 GMPSP49915 693 aaPredicted RBP11.57□□□□□ -0.56
RFX4-207ENST00000546882 GRIPAP1Q4V328 841 aa11.57□□□□□ -0.56
RFX4-207ENST00000546882 CDC37L1Q7L3B6 337 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms