RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 SCNN1DP51172 638 aa24.25■■□□□ 1.47
CHPT1-202ENST00000546490 MPNDQ8N594 471 aa24.25■■□□□ 1.47
CHPT1-202ENST00000546490 MKRN1Q9UHC7 482 aaKnown RBP24.25■■□□□ 1.47
CHPT1-202ENST00000546490 CNTNAP1P78357 1384 aa24.25■■□□□ 1.47
CHPT1-202ENST00000546490 ITGBL1O95965 494 aaPredicted RBP24.24■■□□□ 1.47
CHPT1-202ENST00000546490 HSPA1AP0DMV8 641 aaKnown RBP24.24■■□□□ 1.47
CHPT1-202ENST00000546490 HSPA1BP0DMV9 641 aaKnown RBP24.24■■□□□ 1.47
CHPT1-202ENST00000546490 FAM89AQ96GI7 184 aa24.24■■□□□ 1.47
CHPT1-202ENST00000546490 TMEM88BA6NKF7 163 aa24.23■■□□□ 1.47
CHPT1-202ENST00000546490 MAP1SQ66K74 1059 aaPredicted RBP24.23■■□□□ 1.47
CHPT1-202ENST00000546490 RIC3Q7Z5B4 369 aa24.23■■□□□ 1.47
CHPT1-202ENST00000546490 ZNRF3Q9ULT6 936 aa24.23■■□□□ 1.47
CHPT1-202ENST00000546490 MYH3P11055 1940 aa24.22■■□□□ 1.47
CHPT1-202ENST00000546490 ELL2O00472 640 aaPredicted RBP24.22■■□□□ 1.47
CHPT1-202ENST00000546490 KIAA2012Q0VF49 1180 aa24.22■■□□□ 1.47
CHPT1-202ENST00000546490 TRIM28Q13263 835 aaKnown RBP24.22■■□□□ 1.47
CHPT1-202ENST00000546490 CNTROBQ8N137 903 aa24.22■■□□□ 1.47
CHPT1-202ENST00000546490 CHMP4AQ9BY43 222 aa24.22■■□□□ 1.47
CHPT1-202ENST00000546490 COL4A1P02462 1669 aa24.21■■□□□ 1.47
CHPT1-202ENST00000546490 SF3B3Q15393 1217 aaKnown RBP24.21■■□□□ 1.47
CHPT1-202ENST00000546490 EPS15P42566 896 aa24.2■■□□□ 1.46
CHPT1-202ENST00000546490 RTL5Q5HYW3 569 aaPredicted RBP24.2■■□□□ 1.46
CHPT1-202ENST00000546490 USP50Q70EL3 339 aaPredicted RBP24.2■■□□□ 1.46
CHPT1-202ENST00000546490 PHAXQ9H814 394 aaKnown RBP24.2■■□□□ 1.46
CHPT1-202ENST00000546490 CDHR2Q9BYE9 1310 aa24.19■■□□□ 1.46
CHPT1-202ENST00000546490 IRS4O14654 1257 aaPredicted RBP24.19■■□□□ 1.46
CHPT1-202ENST00000546490 C8orf58Q8NAV2 365 aa24.19■■□□□ 1.46
CHPT1-202ENST00000546490 HSP90B1P14625 803 aaKnown RBP24.18■■□□□ 1.46
CHPT1-202ENST00000546490 CXCL9Q07325 125 aa24.18■■□□□ 1.46
CHPT1-202ENST00000546490 CCDC30Q5VVM6 783 aa24.18■■□□□ 1.46
CHPT1-202ENST00000546490 GPRC5DQ9NZD1 345 aa24.18■■□□□ 1.46
CHPT1-202ENST00000546490 CACNA1FO60840 1977 aa24.17■■□□□ 1.46
CHPT1-202ENST00000546490 DDX58O95786 925 aaKnown RBP24.17■■□□□ 1.46
CHPT1-202ENST00000546490 COL13A1Q5TAT6 717 aaPredicted RBP24.17■■□□□ 1.46
CHPT1-202ENST00000546490 CIAPIN1Q6FI81 312 aa24.17■■□□□ 1.46
CHPT1-202ENST00000546490 ZBTB38Q8NAP3 1195 aaPredicted RBP24.17■■□□□ 1.46
CHPT1-202ENST00000546490 CELF1Q92879 486 aaKnown RBP24.17■■□□□ 1.46
CHPT1-202ENST00000546490 MYD88Q99836 296 aa24.17■■□□□ 1.46
CHPT1-202ENST00000546490 ADARB2Q9NS39 739 aaKnown RBP24.17■■□□□ 1.46
CHPT1-202ENST00000546490 SPEF2Q9C093 1822 aa24.17■■□□□ 1.46
CHPT1-202ENST00000546490 ZEB1P37275 1124 aaPredicted RBP24.16■■□□□ 1.46
CHPT1-202ENST00000546490 GMPSP49915 693 aaPredicted RBP24.15■■□□□ 1.46
CHPT1-202ENST00000546490 TNIP1Q15025 636 aa24.15■■□□□ 1.46
CHPT1-202ENST00000546490 CCDC27Q2M243 656 aa24.15■■□□□ 1.46
CHPT1-202ENST00000546490 CCDC184Q52MB2 194 aa24.15■■□□□ 1.46
CHPT1-202ENST00000546490 CCDC191Q8NCU4 936 aa24.15■■□□□ 1.46
CHPT1-202ENST00000546490 THSD7BQ9C0I4 1608 aa24.14■■□□□ 1.46
CHPT1-202ENST00000546490 NSFL1CQ9UNZ2 370 aaKnown RBP24.14■■□□□ 1.45
CHPT1-202ENST00000546490 RAD17O75943 681 aa24.13■■□□□ 1.45
CHPT1-202ENST00000546490 TSR2Q969E8 191 aaKnown RBP24.13■■□□□ 1.45
CHPT1-202ENST00000546490 BCL2L13Q9BXK5 485 aa24.13■■□□□ 1.45
CHPT1-202ENST00000546490 CWC25Q9NXE8 425 aaPredicted RBP24.13■■□□□ 1.45
CHPT1-202ENST00000546490 PSME4Q14997 1843 aa24.12■■□□□ 1.45
CHPT1-202ENST00000546490 RASSF10A6NK89 507 aa24.12■■□□□ 1.45
CHPT1-202ENST00000546490 PCCAP05165 728 aaPredicted RBP24.12■■□□□ 1.45
CHPT1-202ENST00000546490 WASHC4Q2M389 1173 aa24.12■■□□□ 1.45
CHPT1-202ENST00000546490 METTL22Q9BUU2 404 aaPredicted RBP24.12■■□□□ 1.45
CHPT1-202ENST00000546490 STK31Q9BXU1 1019 aa24.12■■□□□ 1.45
CHPT1-202ENST00000546490 ABT1Q9ULW3 272 aaKnown RBP24.12■■□□□ 1.45
CHPT1-202ENST00000546490 VEGFBP49765 207 aa24.11■■□□□ 1.45
CHPT1-202ENST00000546490 TNS4Q8IZW8 715 aa24.11■■□□□ 1.45
CHPT1-202ENST00000546490 TSPYL6Q8N831 410 aa24.11■■□□□ 1.45
CHPT1-202ENST00000546490 EYA3Q99504 573 aa24.11■■□□□ 1.45
CHPT1-202ENST00000546490 YDJCA8MPS7 323 aa24.1■■□□□ 1.45
CHPT1-202ENST00000546490 C6orf229H3BNL8 230 aa24.1■■□□□ 1.45
CHPT1-202ENST00000546490 RPS8P62241 208 aaKnown RBP24.1■■□□□ 1.45
CHPT1-202ENST00000546490 GPSM2P81274 684 aa24.1■■□□□ 1.45
CHPT1-202ENST00000546490 CCDC152Q4G0S7 254 aa24.1■■□□□ 1.45
CHPT1-202ENST00000546490 WWC1Q8IX03 1113 aa24.1■■□□□ 1.45
CHPT1-202ENST00000546490 MRS2Q9HD23 443 aa24.1■■□□□ 1.45
CHPT1-202ENST00000546490 MAP3K2Q9Y2U5 619 aa24.1■■□□□ 1.45
CHPT1-202ENST00000546490 SCN9AQ15858 1988 aa24.1■■□□□ 1.45
CHPT1-202ENST00000546490 PDE8AO60658 829 aa24.09■■□□□ 1.45
CHPT1-202ENST00000546490 DEFB115Q30KQ5 88 aa24.09■■□□□ 1.45
CHPT1-202ENST00000546490 IL16Q14005 1332 aa24.09■■□□□ 1.45
CHPT1-202ENST00000546490 TWISTNBQ3B726 338 aaPredicted RBP24.08■■□□□ 1.45
CHPT1-202ENST00000546490 AIDAQ96BJ3 306 aa24.08■■□□□ 1.45
CHPT1-202ENST00000546490 DBNDD1Q9H9R9 158 aa24.08■■□□□ 1.45
CHPT1-202ENST00000546490 POLLQ9UGP5 575 aa24.08■■□□□ 1.45
CHPT1-202ENST00000546490 RIMBP2O15034 1052 aa24.07■■□□□ 1.44
CHPT1-202ENST00000546490 ANP32CO43423 234 aa24.07■■□□□ 1.44
CHPT1-202ENST00000546490 NEXNQ0ZGT2 675 aa24.07■■□□□ 1.44
CHPT1-202ENST00000546490 NCBP3Q53F19 620 aaKnown RBP24.07■■□□□ 1.44
CHPT1-202ENST00000546490 KSR2Q6VAB6 950 aa24.07■■□□□ 1.44
CHPT1-202ENST00000546490 SEC31BQ9NQW1 1179 aa24.07■■□□□ 1.44
CHPT1-202ENST00000546490 TRAF5O00463 557 aa24.06■■□□□ 1.44
CHPT1-202ENST00000546490 ECE2O60344 883 aa24.06■■□□□ 1.44
CHPT1-202ENST00000546490 TBC1D16Q8TBP0 767 aa24.06■■□□□ 1.44
CHPT1-202ENST00000546490 PODXL2Q9NZ53 605 aa24.06■■□□□ 1.44
CHPT1-202ENST00000546490 PI4KAP2A4QPH2 592 aa24.05■■□□□ 1.44
CHPT1-202ENST00000546490 H7C1D1 291 aa24.05■■□□□ 1.44
CHPT1-202ENST00000546490 FMR1Q06787 632 aaKnown RBP eCLIP24.05■■□□□ 1.44
CHPT1-202ENST00000546490 PI4KAP1Q8N8J0 262 aa24.05■■□□□ 1.44
CHPT1-202ENST00000546490 ZC3H15Q8WU90 426 aaKnown RBP24.05■■□□□ 1.44
CHPT1-202ENST00000546490 ANKIB1Q9P2G1 1089 aa24.05■■□□□ 1.44
CHPT1-202ENST00000546490 CNOT7Q9UIV1 285 aaKnown RBP24.05■■□□□ 1.44
CHPT1-202ENST00000546490 WDR33Q9C0J8 1336 aaKnown RBP24.05■■□□□ 1.44
CHPT1-202ENST00000546490 PSMD14O00487 310 aa24.04■■□□□ 1.44
CHPT1-202ENST00000546490 FOXN1O15353 648 aa24.04■■□□□ 1.44
CHPT1-202ENST00000546490 UFL1O94874 794 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms