RNA–Protein interactions for RNA: ENST00000546480.1

VENTXP3-201, Transcript of VENT homeobox pseudogene 3, humanhuman

BASIC

Gene VENTXP3, Length 773 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VENTXP3-201ENST00000546480 PTPRCP08575 1304 aa17.47■□□□□ 0.39
VENTXP3-201ENST00000546480 ZBED9Q6R2W3 1325 aa17.47■□□□□ 0.39
VENTXP3-201ENST00000546480 CDHR2Q9BYE9 1310 aa17.47■□□□□ 0.39
VENTXP3-201ENST00000546480 SF3B3Q15393 1217 aaKnown RBP17.46■□□□□ 0.39
VENTXP3-201ENST00000546480 BEND3Q5T5X7 828 aa17.46■□□□□ 0.39
VENTXP3-201ENST00000546480 C7orf43Q8WVR3 580 aa17.46■□□□□ 0.39
VENTXP3-201ENST00000546480 SRCIN1Q9C0H9 1055 aa17.46■□□□□ 0.39
VENTXP3-201ENST00000546480 ZNF277Q9NRM2 450 aaPredicted RBP17.46■□□□□ 0.39
VENTXP3-201ENST00000546480 MYH3P11055 1940 aa17.45■□□□□ 0.38
VENTXP3-201ENST00000546480 BBOX1O75936 387 aa17.45■□□□□ 0.38
VENTXP3-201ENST00000546480 CC2D2BQ6DHV5 1058 aa17.45■□□□□ 0.38
VENTXP3-201ENST00000546480 SLC51AQ86UW1 340 aa17.45■□□□□ 0.38
VENTXP3-201ENST00000546480 C9orf78Q9NZ63 289 aaPredicted RBP17.45■□□□□ 0.38
VENTXP3-201ENST00000546480 PRELPP51888 382 aa17.44■□□□□ 0.38
VENTXP3-201ENST00000546480 CTSWP56202 376 aa17.44■□□□□ 0.38
VENTXP3-201ENST00000546480 CELF1Q92879 486 aaKnown RBP17.44■□□□□ 0.38
VENTXP3-201ENST00000546480 CHMP3Q9Y3E7 222 aa17.44■□□□□ 0.38
VENTXP3-201ENST00000546480 ATP6V0A2Q9Y487 856 aa17.44■□□□□ 0.38
VENTXP3-201ENST00000546480 LTBP3Q9NS15 1303 aa17.44■□□□□ 0.38
VENTXP3-201ENST00000546480 SPEF2Q9C093 1822 aa17.43■□□□□ 0.38
VENTXP3-201ENST00000546480 H7C1W4 665 aa17.43■□□□□ 0.38
VENTXP3-201ENST00000546480 DPP8Q6V1X1 898 aaPredicted RBP17.43■□□□□ 0.38
VENTXP3-201ENST00000546480 SEC31BQ9NQW1 1179 aa17.43■□□□□ 0.38
VENTXP3-201ENST00000546480 NOB1Q9ULX3 412 aaKnown RBP17.43■□□□□ 0.38
VENTXP3-201ENST00000546480 IARSP41252 1262 aaKnown RBP17.42■□□□□ 0.38
VENTXP3-201ENST00000546480 RARSP54136 660 aaKnown RBP17.42■□□□□ 0.38
VENTXP3-201ENST00000546480 GRIPAP1Q4V328 841 aa17.42■□□□□ 0.38
VENTXP3-201ENST00000546480 SP8Q8IXZ3 490 aa17.42■□□□□ 0.38
VENTXP3-201ENST00000546480 DICER1Q9UPY3 1922 aaKnown RBP17.42■□□□□ 0.38
VENTXP3-201ENST00000546480 GRM8O00222 908 aa17.41■□□□□ 0.38
VENTXP3-201ENST00000546480 ALDH1L1O75891 902 aa17.41■□□□□ 0.38
VENTXP3-201ENST00000546480 TMC4Q7Z404 712 aa17.41■□□□□ 0.38
VENTXP3-201ENST00000546480 ANKRD18AQ8IVF6 992 aa17.41■□□□□ 0.38
VENTXP3-201ENST00000546480 MPNDQ8N594 471 aa17.41■□□□□ 0.38
VENTXP3-201ENST00000546480 FRAT1Q92837 279 aaPredicted RBP17.41■□□□□ 0.38
VENTXP3-201ENST00000546480 PSMD1Q99460 953 aa17.41■□□□□ 0.38
VENTXP3-201ENST00000546480 KDM2BQ8NHM5 1336 aa17.41■□□□□ 0.38
VENTXP3-201ENST00000546480 KIF16BQ96L93 1317 aa17.41■□□□□ 0.38
VENTXP3-201ENST00000546480 COL4A1P02462 1669 aa17.4■□□□□ 0.38
VENTXP3-201ENST00000546480 RPS8P62241 208 aaKnown RBP17.4■□□□□ 0.38
VENTXP3-201ENST00000546480 SUPT20HQ8NEM7 779 aa17.4■□□□□ 0.38
VENTXP3-201ENST00000546480 TTLL11Q8NHH1 800 aa17.4■□□□□ 0.38
VENTXP3-201ENST00000546480 CDC5LQ99459 802 aaKnown RBP17.4■□□□□ 0.38
VENTXP3-201ENST00000546480 GREM2Q9H772 168 aa17.4■□□□□ 0.38
VENTXP3-201ENST00000546480 NSFL1CQ9UNZ2 370 aaKnown RBP17.4■□□□□ 0.38
VENTXP3-201ENST00000546480 ZC3H4Q9UPT8 1303 aaKnown RBP17.4■□□□□ 0.38
VENTXP3-201ENST00000546480 PPIP5K2O43314 1243 aa17.39■□□□□ 0.37
VENTXP3-201ENST00000546480 DPY19L2Q6NUT2 758 aa17.39■□□□□ 0.37
VENTXP3-201ENST00000546480 LARGE2Q8N3Y3 721 aa17.39■□□□□ 0.37
VENTXP3-201ENST00000546480 JDP2Q8WYK2 163 aa17.39■□□□□ 0.37
VENTXP3-201ENST00000546480 API5Q9BZZ5 524 aaKnown RBP17.39■□□□□ 0.37
VENTXP3-201ENST00000546480 LRRC37AA6NMS7 1700 aa17.38■□□□□ 0.37
VENTXP3-201ENST00000546480 IGHMBP2P38935 993 aaKnown RBP17.38■□□□□ 0.37
VENTXP3-201ENST00000546480 CASP7P55210 303 aa17.38■□□□□ 0.37
VENTXP3-201ENST00000546480 AOC3Q16853 763 aa17.38■□□□□ 0.37
VENTXP3-201ENST00000546480 FAM161AQ3B820 660 aa17.38■□□□□ 0.37
VENTXP3-201ENST00000546480 ANKIB1Q9P2G1 1089 aa17.38■□□□□ 0.37
VENTXP3-201ENST00000546480 C6orf229H3BNL8 230 aa17.37■□□□□ 0.37
VENTXP3-201ENST00000546480 BCAR3O75815 825 aa17.37■□□□□ 0.37
VENTXP3-201ENST00000546480 ITGA6P23229 1130 aa17.37■□□□□ 0.37
VENTXP3-201ENST00000546480 TAF7LQ5H9L4 462 aa17.37■□□□□ 0.37
VENTXP3-201ENST00000546480 YTHDC1Q96MU7 727 aaKnown RBP17.37■□□□□ 0.37
VENTXP3-201ENST00000546480 PLA2G12BQ9BX93 195 aa17.37■□□□□ 0.37
VENTXP3-201ENST00000546480 NMRK2Q9NPI5 230 aa17.37■□□□□ 0.37
VENTXP3-201ENST00000546480 SNED1Q8TER0 1413 aa17.37■□□□□ 0.37
VENTXP3-201ENST00000546480 ANKRD18BA2A2Z9 1011 aa17.36■□□□□ 0.37
VENTXP3-201ENST00000546480 GLTPD2A6NH11 291 aa17.36■□□□□ 0.37
VENTXP3-201ENST00000546480 GPSM2P81274 684 aa17.36■□□□□ 0.37
VENTXP3-201ENST00000546480 NIM1KQ8IY84 436 aa17.36■□□□□ 0.37
VENTXP3-201ENST00000546480 C16orf71Q8IYS4 520 aaPredicted RBP17.36■□□□□ 0.37
VENTXP3-201ENST00000546480 MPHOSPH8Q99549 860 aa17.36■□□□□ 0.37
VENTXP3-201ENST00000546480 RRAGCQ9HB90 399 aa17.36■□□□□ 0.37
VENTXP3-201ENST00000546480 IPO8O15397 1037 aaKnown RBP17.35■□□□□ 0.37
VENTXP3-201ENST00000546480 NBPF7P0C2Y1 421 aaPredicted RBP17.35■□□□□ 0.37
VENTXP3-201ENST00000546480 CCT4P50991 539 aaKnown RBP17.35■□□□□ 0.37
VENTXP3-201ENST00000546480 EIF6P56537 245 aaKnown RBP17.35■□□□□ 0.37
VENTXP3-201ENST00000546480 LMBR1LQ6UX01 489 aa17.35■□□□□ 0.37
VENTXP3-201ENST00000546480 SUCLG2Q96I99 432 aa17.35■□□□□ 0.37
VENTXP3-201ENST00000546480 RIMBP2O15034 1052 aa17.34■□□□□ 0.37
VENTXP3-201ENST00000546480 FOXO4P98177 505 aa17.34■□□□□ 0.37
VENTXP3-201ENST00000546480 IFIT5Q13325 482 aaKnown RBP17.34■□□□□ 0.37
VENTXP3-201ENST00000546480 CCDC57Q2TAC2 916 aa17.34■□□□□ 0.37
VENTXP3-201ENST00000546480 RTL9Q8NET4 1388 aa17.33■□□□□ 0.36
VENTXP3-201ENST00000546480 ZNF541Q9H0D2 1346 aa17.33■□□□□ 0.36
VENTXP3-201ENST00000546480 G3V3G9 751 aa17.33■□□□□ 0.36
VENTXP3-201ENST00000546480 DDNO94850 711 aaPredicted RBP17.33■□□□□ 0.36
VENTXP3-201ENST00000546480 UFL1O94874 794 aa17.33■□□□□ 0.36
VENTXP3-201ENST00000546480 BRPF1P55201 1214 aaPredicted RBP17.33■□□□□ 0.36
VENTXP3-201ENST00000546480 WASHC4Q2M389 1173 aa17.33■□□□□ 0.36
VENTXP3-201ENST00000546480 DCAF8Q5TAQ9 597 aa17.33■□□□□ 0.36
VENTXP3-201ENST00000546480 CLUAP1Q96AJ1 413 aa17.33■□□□□ 0.36
VENTXP3-201ENST00000546480 EYA3Q99504 573 aa17.33■□□□□ 0.36
VENTXP3-201ENST00000546480 GGA1Q9UJY5 639 aa17.33■□□□□ 0.36
VENTXP3-201ENST00000546480 GJA3Q9Y6H8 435 aa17.33■□□□□ 0.36
VENTXP3-201ENST00000546480 DUOX1Q9NRD9 1551 aa17.32■□□□□ 0.36
VENTXP3-201ENST00000546480 CSF1RP07333 972 aa17.32■□□□□ 0.36
VENTXP3-201ENST00000546480 EPHA10Q5JZY3 1008 aa17.32■□□□□ 0.36
VENTXP3-201ENST00000546480 GPR101Q96P66 508 aaPredicted RBP17.32■□□□□ 0.36
VENTXP3-201ENST00000546480 RTFDC1Q9BY42 306 aaPredicted RBP17.32■□□□□ 0.36
VENTXP3-201ENST00000546480 XDHP47989 1333 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms