RNA–Protein interactions for RNA: ENST00000546279.5

LMO3-233, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-233ENST00000546279 ATF7IPQ6VMQ6 1270 aa13.55□□□□□ -0.24
LMO3-233ENST00000546279 NPM2Q86SE8 214 aaKnown RBP13.55□□□□□ -0.24
LMO3-233ENST00000546279 CCDC191Q8NCU4 936 aa13.55□□□□□ -0.24
LMO3-233ENST00000546279 LINS1Q8NG48 757 aa13.55□□□□□ -0.24
LMO3-233ENST00000546279 SETDB2Q96T68 719 aa13.55□□□□□ -0.24
LMO3-233ENST00000546279 SBF1O95248 1867 aa13.55□□□□□ -0.24
LMO3-233ENST00000546279 KLRG2A4D1S0 409 aaPredicted RBP13.54□□□□□ -0.24
LMO3-233ENST00000546279 SLC10A5Q5PT55 438 aa13.54□□□□□ -0.24
LMO3-233ENST00000546279 UTYO14607 1347 aa13.54□□□□□ -0.24
LMO3-233ENST00000546279 SPDYE2BA6NHP3 402 aa13.53□□□□□ -0.24
LMO3-233ENST00000546279 H7C1W4 665 aa13.53□□□□□ -0.24
LMO3-233ENST00000546279 FOXN1O15353 648 aa13.53□□□□□ -0.24
LMO3-233ENST00000546279 SPDYE6P0CI01 402 aa13.53□□□□□ -0.24
LMO3-233ENST00000546279 RASSF7Q02833 373 aa13.53□□□□□ -0.24
LMO3-233ENST00000546279 GCKRQ14397 625 aa13.53□□□□□ -0.24
LMO3-233ENST00000546279 SPDYE2Q495Y8 402 aa13.53□□□□□ -0.24
LMO3-233ENST00000546279 INTS3Q68E01 1043 aaKnown RBP13.53□□□□□ -0.24
LMO3-233ENST00000546279 C3orf67Q6ZVT6 689 aa13.53□□□□□ -0.24
LMO3-233ENST00000546279 API5Q9BZZ5 524 aaKnown RBP13.53□□□□□ -0.24
LMO3-233ENST00000546279 MKRN1Q9UHC7 482 aaKnown RBP13.53□□□□□ -0.24
LMO3-233ENST00000546279 A0A1B0GUL6 1792 aa13.53□□□□□ -0.24
LMO3-233ENST00000546279 SLX4Q8IY92 1834 aa13.53□□□□□ -0.24
LMO3-233ENST00000546279 PLIN1O60240 522 aa13.52□□□□□ -0.25
LMO3-233ENST00000546279 ALDH1L1O75891 902 aa13.52□□□□□ -0.25
LMO3-233ENST00000546279 PCCAP05165 728 aaPredicted RBP13.52□□□□□ -0.25
LMO3-233ENST00000546279 ERFEQ4G0M1 354 aa13.52□□□□□ -0.25
LMO3-233ENST00000546279 ZKSCAN2Q63HK3 967 aa13.52□□□□□ -0.25
LMO3-233ENST00000546279 CHADLQ6NUI6 762 aa13.52□□□□□ -0.25
LMO3-233ENST00000546279 NUTM1Q86Y26 1132 aa13.52□□□□□ -0.25
LMO3-233ENST00000546279 CCDC24Q8N4L8 307 aa13.52□□□□□ -0.25
LMO3-233ENST00000546279 TTLL6Q8N841 843 aa13.52□□□□□ -0.25
LMO3-233ENST00000546279 KAZALD1Q96I82 304 aa13.52□□□□□ -0.25
LMO3-233ENST00000546279 LRRC37AA6NMS7 1700 aa13.52□□□□□ -0.25
LMO3-233ENST00000546279 SPEF2Q9C093 1822 aa13.51□□□□□ -0.25
LMO3-233ENST00000546279 CDHR2Q9BYE9 1310 aa13.51□□□□□ -0.25
LMO3-233ENST00000546279 C20orf194Q5TEA3 1177 aa13.51□□□□□ -0.25
LMO3-233ENST00000546279 NBPF5PQ86XG9 351 aaPredicted RBP13.51□□□□□ -0.25
LMO3-233ENST00000546279 FAM89AQ96GI7 184 aa13.51□□□□□ -0.25
LMO3-233ENST00000546279 USP44Q9H0E7 712 aa13.51□□□□□ -0.25
LMO3-233ENST00000546279 CWC25Q9NXE8 425 aaPredicted RBP13.51□□□□□ -0.25
LMO3-233ENST00000546279 CRY2Q49AN0 593 aa13.5□□□□□ -0.25
LMO3-233ENST00000546279 TMEM57Q8N5G2 664 aa13.5□□□□□ -0.25
LMO3-233ENST00000546279 CNBD1Q8NA66 436 aa13.5□□□□□ -0.25
LMO3-233ENST00000546279 ZBTB38Q8NAP3 1195 aaPredicted RBP13.5□□□□□ -0.25
LMO3-233ENST00000546279 JARID2Q92833 1246 aaPredicted RBP13.5□□□□□ -0.25
LMO3-233ENST00000546279 FRAT1Q92837 279 aaPredicted RBP13.5□□□□□ -0.25
LMO3-233ENST00000546279 UTP14AQ9BVJ6 771 aaKnown RBP13.5□□□□□ -0.25
LMO3-233ENST00000546279 SRCIN1Q9C0H9 1055 aa13.5□□□□□ -0.25
LMO3-233ENST00000546279 CNTNAP1P78357 1384 aa13.49□□□□□ -0.25
LMO3-233ENST00000546279 FAM177BA6PVY3 158 aa13.49□□□□□ -0.25
LMO3-233ENST00000546279 POTECB2RU33 542 aa13.49□□□□□ -0.25
LMO3-233ENST00000546279 IPO8O15397 1037 aaKnown RBP13.49□□□□□ -0.25
LMO3-233ENST00000546279 NBPF7P0C2Y1 421 aaPredicted RBP13.49□□□□□ -0.25
LMO3-233ENST00000546279 RRP1P56182 461 aaKnown RBP13.49□□□□□ -0.25
LMO3-233ENST00000546279 NEXNQ0ZGT2 675 aa13.49□□□□□ -0.25
LMO3-233ENST00000546279 TPTE2Q6XPS3 522 aa13.49□□□□□ -0.25
LMO3-233ENST00000546279 PPP1R42Q7Z4L9 355 aa13.49□□□□□ -0.25
LMO3-233ENST00000546279 PANK1Q8TE04 598 aa13.49□□□□□ -0.25
LMO3-233ENST00000546279 BRIP1Q9BX63 1249 aa13.49□□□□□ -0.25
LMO3-233ENST00000546279 PLA2G12BQ9BX93 195 aa13.49□□□□□ -0.25
LMO3-233ENST00000546279 NYXQ9GZU5 481 aa13.49□□□□□ -0.25
LMO3-233ENST00000546279 TRMT112Q9UI30 125 aaKnown RBP13.49□□□□□ -0.25
LMO3-233ENST00000546279 LTBP1Q14766 1721 aa13.49□□□□□ -0.25
LMO3-233ENST00000546279 SH3TC1Q8TE82 1336 aa13.48□□□□□ -0.25
LMO3-233ENST00000546279 H0YIN7 160 aa13.48□□□□□ -0.25
LMO3-233ENST00000546279 CCT4P50991 539 aaKnown RBP13.48□□□□□ -0.25
LMO3-233ENST00000546279 EPHA10Q5JZY3 1008 aa13.48□□□□□ -0.25
LMO3-233ENST00000546279 SLC4A10Q6U841 1118 aa13.48□□□□□ -0.25
LMO3-233ENST00000546279 DZIP1LQ8IYY4 767 aaKnown RBP13.48□□□□□ -0.25
LMO3-233ENST00000546279 CLUAP1Q96AJ1 413 aa13.48□□□□□ -0.25
LMO3-233ENST00000546279 PDZRN3Q9UPQ7 1066 aa13.48□□□□□ -0.25
LMO3-233ENST00000546279 FER1L6Q2WGJ9 1857 aa13.48□□□□□ -0.25
LMO3-233ENST00000546279 SNED1Q8TER0 1413 aa13.47□□□□□ -0.25
LMO3-233ENST00000546279 GRM8O00222 908 aa13.47□□□□□ -0.25
LMO3-233ENST00000546279 HCLS1P14317 486 aaPredicted RBP13.47□□□□□ -0.25
LMO3-233ENST00000546279 FOXO4P98177 505 aa13.47□□□□□ -0.25
LMO3-233ENST00000546279 FAM161AQ3B820 660 aa13.47□□□□□ -0.25
LMO3-233ENST00000546279 UBE3BQ7Z3V4 1068 aa13.47□□□□□ -0.25
LMO3-233ENST00000546279 IQCA1LA6NCM1 817 aa13.46□□□□□ -0.25
LMO3-233ENST00000546279 NFKBIEO00221 500 aa13.46□□□□□ -0.25
LMO3-233ENST00000546279 IRS4O14654 1257 aaPredicted RBP13.46□□□□□ -0.25
LMO3-233ENST00000546279 SRGNP10124 158 aa13.46□□□□□ -0.25
LMO3-233ENST00000546279 HOXA10P31260 410 aaPredicted RBP13.46□□□□□ -0.25
LMO3-233ENST00000546279 PDE3AQ14432 1141 aa13.46□□□□□ -0.25
LMO3-233ENST00000546279 SF3B3Q15393 1217 aaKnown RBP13.46□□□□□ -0.25
LMO3-233ENST00000546279 C2CD5Q86YS7 1000 aa13.46□□□□□ -0.25
LMO3-233ENST00000546279 ABHD8Q96I13 439 aa13.46□□□□□ -0.25
LMO3-233ENST00000546279 MEIS3Q99687 375 aa13.46□□□□□ -0.25
LMO3-233ENST00000546279 WBP1LQ9NX94 342 aa13.46□□□□□ -0.25
LMO3-233ENST00000546279 SSUH2Q9Y2M2 353 aa13.46□□□□□ -0.25
LMO3-233ENST00000546279 RTL9Q8NET4 1388 aa13.45□□□□□ -0.26
LMO3-233ENST00000546279 TMEM88BA6NKF7 163 aa13.45□□□□□ -0.26
LMO3-233ENST00000546279 ZBTB7BO15156 539 aaPredicted RBP13.45□□□□□ -0.26
LMO3-233ENST00000546279 CSF1RP07333 972 aa13.45□□□□□ -0.26
LMO3-233ENST00000546279 LBX1P52954 281 aa13.45□□□□□ -0.26
LMO3-233ENST00000546279 MLLT1Q03111 559 aaPredicted RBP13.45□□□□□ -0.26
LMO3-233ENST00000546279 RTL5Q5HYW3 569 aaPredicted RBP13.45□□□□□ -0.26
LMO3-233ENST00000546279 SLC51AQ86UW1 340 aa13.45□□□□□ -0.26
LMO3-233ENST00000546279 ANKRD44Q8N8A2 993 aa13.45□□□□□ -0.26
LMO3-233ENST00000546279 SUCLG2Q96I99 432 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms