RNA–Protein interactions for RNA: ENST00000546160.5

PDE4D-226, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 7,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-226ENST00000546160 UBE3BQ7Z3V4 1068 aa7.36□□□□□ -1.23
PDE4D-226ENST00000546160 TSPYL1Q9H0U9 437 aa7.36□□□□□ -1.23
PDE4D-226ENST00000546160 PARP3Q9Y6F1 533 aa7.36□□□□□ -1.23
PDE4D-226ENST00000546160 PREX2Q70Z35 1606 aa7.36□□□□□ -1.23
PDE4D-226ENST00000546160 MAP3K5Q99683 1374 aa7.36□□□□□ -1.23
PDE4D-226ENST00000546160 GOLIM4O00461 696 aa7.36□□□□□ -1.23
PDE4D-226ENST00000546160 YEATS4O95619 227 aa7.36□□□□□ -1.23
PDE4D-226ENST00000546160 CALML3P27482 149 aa7.36□□□□□ -1.23
PDE4D-226ENST00000546160 TPTE2Q6XPS3 522 aa7.36□□□□□ -1.23
PDE4D-226ENST00000546160 CCDC8Q9H0W5 538 aaPredicted RBP7.36□□□□□ -1.23
PDE4D-226ENST00000546160 INCENPQ9NQS7 918 aa7.36□□□□□ -1.23
PDE4D-226ENST00000546160 BABAM1Q9NWV8 329 aa7.36□□□□□ -1.23
PDE4D-226ENST00000546160 YTHDC2Q9H6S0 1430 aaKnown RBP7.36□□□□□ -1.23
PDE4D-226ENST00000546160 IL15P40933 162 aaPredicted RBP7.36□□□□□ -1.23
PDE4D-226ENST00000546160 UBA7P41226 1012 aa7.36□□□□□ -1.23
PDE4D-226ENST00000546160 PAFAH1B1P43034 410 aa7.36□□□□□ -1.23
PDE4D-226ENST00000546160 ALS2CR12Q96Q35 445 aa7.36□□□□□ -1.23
PDE4D-226ENST00000546160 CALRP27797 417 aaKnown RBP7.35□□□□□ -1.23
PDE4D-226ENST00000546160 MCM4P33991 863 aa7.35□□□□□ -1.23
PDE4D-226ENST00000546160 ZCCHC11Q5TAX3 1644 aaKnown RBP7.35□□□□□ -1.23
PDE4D-226ENST00000546160 POTEB2H3BUK9 544 aa7.35□□□□□ -1.23
PDE4D-226ENST00000546160 SKIDA1Q1XH10 827 aa7.35□□□□□ -1.23
PDE4D-226ENST00000546160 CCDC174Q6PII3 467 aa7.35□□□□□ -1.23
PDE4D-226ENST00000546160 HOOK2Q96ED9 719 aa7.35□□□□□ -1.23
PDE4D-226ENST00000546160 EMILIN1Q9Y6C2 1016 aa7.35□□□□□ -1.23
PDE4D-226ENST00000546160 CDC42BPAQ5VT25 1732 aa7.35□□□□□ -1.23
PDE4D-226ENST00000546160 CTAGE1Q96RT6 745 aa7.35□□□□□ -1.23
PDE4D-226ENST00000546160 LMTK3Q96Q04 1460 aa7.35□□□□□ -1.23
PDE4D-226ENST00000546160 PI4KAP2A4QPH2 592 aa7.35□□□□□ -1.23
PDE4D-226ENST00000546160 TRIM27P14373 513 aa7.35□□□□□ -1.23
PDE4D-226ENST00000546160 USP8P40818 1118 aa7.35□□□□□ -1.23
PDE4D-226ENST00000546160 CEBPAP49715 358 aaPredicted RBP7.35□□□□□ -1.23
PDE4D-226ENST00000546160 PI4KAP1Q8N8J0 262 aa7.35□□□□□ -1.23
PDE4D-226ENST00000546160 EHBP1Q8NDI1 1231 aa7.35□□□□□ -1.23
PDE4D-226ENST00000546160 DHX37Q8IY37 1157 aaKnown RBP7.35□□□□□ -1.23
PDE4D-226ENST00000546160 KIF18AQ8NI77 898 aa7.35□□□□□ -1.23
PDE4D-226ENST00000546160 UBA5Q9GZZ9 404 aa7.35□□□□□ -1.23
PDE4D-226ENST00000546160 SAMM50Q9Y512 469 aa7.35□□□□□ -1.23
PDE4D-226ENST00000546160 MAPKBP1O60336 1514 aa7.35□□□□□ -1.23
PDE4D-226ENST00000546160 CRACR2AQ9BSW2 395 aa7.35□□□□□ -1.23
PDE4D-226ENST00000546160 EXOC1Q9NV70 894 aa7.35□□□□□ -1.23
PDE4D-226ENST00000546160 ARHGEF10O15013 1369 aa7.34□□□□□ -1.23
PDE4D-226ENST00000546160 MCMDC2Q4G0Z9 681 aa7.34□□□□□ -1.23
PDE4D-226ENST00000546160 ZBTB3Q9H5J0 574 aa7.34□□□□□ -1.23
PDE4D-226ENST00000546160 DISP3Q9P2K9 1392 aa7.34□□□□□ -1.23
PDE4D-226ENST00000546160 GOLGA6L10A0A0M3HER8 536 aa7.34□□□□□ -1.23
PDE4D-226ENST00000546160 STX6O43752 255 aa7.34□□□□□ -1.23
PDE4D-226ENST00000546160 LMOD1P29536 600 aaPredicted RBP7.34□□□□□ -1.23
PDE4D-226ENST00000546160 RBM25P49756 843 aaKnown RBP7.34□□□□□ -1.23
PDE4D-226ENST00000546160 EDC4Q6P2E9 1401 aaKnown RBP7.34□□□□□ -1.23
PDE4D-226ENST00000546160 NUP88Q99567 741 aaPredicted RBP7.34□□□□□ -1.23
PDE4D-226ENST00000546160 STK24Q9Y6E0 443 aa7.34□□□□□ -1.23
PDE4D-226ENST00000546160 ZMYM3Q14202 1370 aa7.34□□□□□ -1.23
PDE4D-226ENST00000546160 HDAC1Q13547 482 aaPredicted RBP7.34□□□□□ -1.23
PDE4D-226ENST00000546160 CCDC97Q96F63 343 aaPredicted RBP7.34□□□□□ -1.23
PDE4D-226ENST00000546160 NAA16Q6N069 864 aaPredicted RBP7.34□□□□□ -1.23
PDE4D-226ENST00000546160 KSR2Q6VAB6 950 aa7.34□□□□□ -1.23
PDE4D-226ENST00000546160 KCNG4Q8TDN1 519 aa7.34□□□□□ -1.23
PDE4D-226ENST00000546160 KDM5CP41229 1560 aa7.34□□□□□ -1.23
PDE4D-226ENST00000546160 HECW2Q9P2P5 1572 aa7.34□□□□□ -1.23
PDE4D-226ENST00000546160 NEO1Q92859 1461 aa7.34□□□□□ -1.23
PDE4D-226ENST00000546160 PRPHP41219 470 aa7.34□□□□□ -1.23
PDE4D-226ENST00000546160 MTIF2P46199 727 aaKnown RBP7.34□□□□□ -1.23
PDE4D-226ENST00000546160 UBE2HP62256 183 aa7.34□□□□□ -1.23
PDE4D-226ENST00000546160 RBM17Q96I25 401 aaKnown RBP7.34□□□□□ -1.23
PDE4D-226ENST00000546160 NAP1L4Q99733 375 aaKnown RBP7.34□□□□□ -1.23
PDE4D-226ENST00000546160 CENPHQ9H3R5 247 aa7.34□□□□□ -1.23
PDE4D-226ENST00000546160 MBIPQ9NS73 344 aa7.34□□□□□ -1.23
PDE4D-226ENST00000546160 TTC41PQ6P2S7 1318 aa7.34□□□□□ -1.23
PDE4D-226ENST00000546160 CROCC2H7BZ55 1655 aa7.34□□□□□ -1.23
PDE4D-226ENST00000546160 SMARCA5O60264 1052 aaPredicted RBP7.34□□□□□ -1.24
PDE4D-226ENST00000546160 TBCAO75347 108 aaKnown RBP7.34□□□□□ -1.24
PDE4D-226ENST00000546160 PRKCSHP14314 528 aaPredicted RBP7.34□□□□□ -1.24
PDE4D-226ENST00000546160 CTNNA2P26232 953 aa7.34□□□□□ -1.24
PDE4D-226ENST00000546160 SREK1Q8WXA9 508 aaKnown RBP7.34□□□□□ -1.24
PDE4D-226ENST00000546160 THUMPD2Q9BTF0 503 aaKnown RBP7.34□□□□□ -1.24
PDE4D-226ENST00000546160 ZC3H12CQ9C0D7 883 aaKnown RBP7.34□□□□□ -1.24
PDE4D-226ENST00000546160 SH2D4AQ9H788 454 aa7.34□□□□□ -1.24
PDE4D-226ENST00000546160 USP16Q9Y5T5 823 aa7.34□□□□□ -1.24
PDE4D-226ENST00000546160 CEP170Q5SW79 1584 aa7.34□□□□□ -1.24
PDE4D-226ENST00000546160 PTPN14Q15678 1187 aa7.33□□□□□ -1.24
PDE4D-226ENST00000546160 ATP2B3Q16720 1220 aa7.33□□□□□ -1.24
PDE4D-226ENST00000546160 RTN1Q16799 776 aa7.33□□□□□ -1.24
PDE4D-226ENST00000546160 RBM28Q9NW13 759 aaKnown RBP7.33□□□□□ -1.24
PDE4D-226ENST00000546160 MAGEB6P1A0A0J9YX57 407 aa7.33□□□□□ -1.24
PDE4D-226ENST00000546160 F6X3S4 739 aa7.33□□□□□ -1.24
PDE4D-226ENST00000546160 ZBTB43O43298 467 aa7.33□□□□□ -1.24
PDE4D-226ENST00000546160 TAX1BP1Q86VP1 789 aa7.33□□□□□ -1.24
PDE4D-226ENST00000546160 DCAF5Q96JK2 942 aa7.33□□□□□ -1.24
PDE4D-226ENST00000546160 FAM177A1Q8N128 213 aaPredicted RBP7.33□□□□□ -1.24
PDE4D-226ENST00000546160 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.33□□□□□ -1.24
PDE4D-226ENST00000546160 TTC22Q5TAA0 569 aa7.33□□□□□ -1.24
PDE4D-226ENST00000546160 KLHL10Q6JEL2 608 aa7.33□□□□□ -1.24
PDE4D-226ENST00000546160 C8orf37Q96NL8 207 aa7.33□□□□□ -1.24
PDE4D-226ENST00000546160 NIP7Q9Y221 180 aaKnown RBP eCLIP7.33□□□□□ -1.24
PDE4D-226ENST00000546160 POLR3AO14802 1390 aaPredicted RBP7.33□□□□□ -1.24
PDE4D-226ENST00000546160 PIK3C2GO75747 1445 aa7.33□□□□□ -1.24
PDE4D-226ENST00000546160 COL17A1Q9UMD9 1497 aaPredicted RBP7.33□□□□□ -1.24
PDE4D-226ENST00000546160 CYP7A1P22680 504 aa7.33□□□□□ -1.24
PDE4D-226ENST00000546160 C6orf50Q9HD87 102 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms