RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 CCDC30Q5VVM6 783 aa27.28■■□□□ 1.96
SCARB1-210ENST00000545493 MYD88Q99836 296 aa27.28■■□□□ 1.96
SCARB1-210ENST00000545493 EPHX2P34913 555 aa27.27■■□□□ 1.96
SCARB1-210ENST00000545493 SF3B3Q15393 1217 aaKnown RBP27.27■■□□□ 1.96
SCARB1-210ENST00000545493 TMX4Q9H1E5 349 aaPredicted RBP27.27■■□□□ 1.96
SCARB1-210ENST00000545493 IL16Q14005 1332 aa27.26■■□□□ 1.95
SCARB1-210ENST00000545493 IRS4O14654 1257 aaPredicted RBP27.26■■□□□ 1.95
SCARB1-210ENST00000545493 NCBP3Q53F19 620 aaKnown RBP27.26■■□□□ 1.95
SCARB1-210ENST00000545493 DPP8Q6V1X1 898 aaPredicted RBP27.26■■□□□ 1.95
SCARB1-210ENST00000545493 NIM1KQ8IY84 436 aa27.26■■□□□ 1.95
SCARB1-210ENST00000545493 JMYQ8N9B5 988 aa27.26■■□□□ 1.95
SCARB1-210ENST00000545493 CELF1Q92879 486 aaKnown RBP27.26■■□□□ 1.95
SCARB1-210ENST00000545493 GJA3Q9Y6H8 435 aa27.26■■□□□ 1.95
SCARB1-210ENST00000545493 PASKQ96RG2 1323 aa27.25■■□□□ 1.95
SCARB1-210ENST00000545493 EAPPQ56P03 285 aaPredicted RBP27.25■■□□□ 1.95
SCARB1-210ENST00000545493 SCNN1DP51172 638 aa27.24■■□□□ 1.95
SCARB1-210ENST00000545493 MPNDQ8N594 471 aa27.24■■□□□ 1.95
SCARB1-210ENST00000545493 ZBTB38Q8NAP3 1195 aaPredicted RBP27.24■■□□□ 1.95
SCARB1-210ENST00000545493 SUPT20HQ8NEM7 779 aa27.24■■□□□ 1.95
SCARB1-210ENST00000545493 FANCIQ9NVI1 1328 aa27.23■■□□□ 1.95
SCARB1-210ENST00000545493 TMC4Q7Z404 712 aa27.23■■□□□ 1.95
SCARB1-210ENST00000545493 VPS33BQ9H267 617 aa27.23■■□□□ 1.95
SCARB1-210ENST00000545493 KIAA2012Q0VF49 1180 aa27.22■■□□□ 1.95
SCARB1-210ENST00000545493 TWISTNBQ3B726 338 aaPredicted RBP27.22■■□□□ 1.95
SCARB1-210ENST00000545493 METTL22Q9BUU2 404 aaPredicted RBP27.22■■□□□ 1.95
SCARB1-210ENST00000545493 DDX58O95786 925 aaKnown RBP27.21■■□□□ 1.95
SCARB1-210ENST00000545493 CCDC191Q8NCU4 936 aa27.21■■□□□ 1.95
SCARB1-210ENST00000545493 PNMA8AQ86V59 439 aaPredicted RBP27.2■■□□□ 1.94
SCARB1-210ENST00000545493 CHMP4AQ9BY43 222 aa27.2■■□□□ 1.94
SCARB1-210ENST00000545493 CWC25Q9NXE8 425 aaPredicted RBP27.2■■□□□ 1.94
SCARB1-210ENST00000545493 MAP3K2Q9Y2U5 619 aa27.2■■□□□ 1.94
SCARB1-210ENST00000545493 PCCAP05165 728 aaPredicted RBP27.19■■□□□ 1.94
SCARB1-210ENST00000545493 CREBZFQ9NS37 354 aa27.19■■□□□ 1.94
SCARB1-210ENST00000545493 ZNRF3Q9ULT6 936 aa27.19■■□□□ 1.94
SCARB1-210ENST00000545493 ITGBL1O95965 494 aaPredicted RBP27.18■■□□□ 1.94
SCARB1-210ENST00000545493 G2E3Q7L622 706 aa27.18■■□□□ 1.94
SCARB1-210ENST00000545493 STK31Q9BXU1 1019 aa27.18■■□□□ 1.94
SCARB1-210ENST00000545493 SALL2Q9Y467 1007 aaPredicted RBP27.18■■□□□ 1.94
SCARB1-210ENST00000545493 MYH3P11055 1940 aa27.18■■□□□ 1.94
SCARB1-210ENST00000545493 PI4KAP2A4QPH2 592 aa27.17■■□□□ 1.94
SCARB1-210ENST00000545493 IGKV5-2P06315 115 aa27.17■■□□□ 1.94
SCARB1-210ENST00000545493 LMOD1P29536 600 aaPredicted RBP27.17■■□□□ 1.94
SCARB1-210ENST00000545493 EPS15P42566 896 aa27.17■■□□□ 1.94
SCARB1-210ENST00000545493 CXCL9Q07325 125 aa27.17■■□□□ 1.94
SCARB1-210ENST00000545493 KSR2Q6VAB6 950 aa27.17■■□□□ 1.94
SCARB1-210ENST00000545493 PI4KAP1Q8N8J0 262 aa27.17■■□□□ 1.94
SCARB1-210ENST00000545493 JARID2Q92833 1246 aaPredicted RBP27.17■■□□□ 1.94
SCARB1-210ENST00000545493 CLEC11AQ9Y240 323 aa27.17■■□□□ 1.94
SCARB1-210ENST00000545493 MAP1SQ66K74 1059 aaPredicted RBP27.16■■□□□ 1.94
SCARB1-210ENST00000545493 SEC31BQ9NQW1 1179 aa27.16■■□□□ 1.94
SCARB1-210ENST00000545493 CDHR2Q9BYE9 1310 aa27.16■■□□□ 1.94
SCARB1-210ENST00000545493 YDJCA8MPS7 323 aa27.15■■□□□ 1.94
SCARB1-210ENST00000545493 GPSM2P81274 684 aa27.15■■□□□ 1.94
SCARB1-210ENST00000545493 SPEF2Q9C093 1822 aa27.14■■□□□ 1.94
SCARB1-210ENST00000545493 WDR63Q8IWG1 891 aa27.14■■□□□ 1.94
SCARB1-210ENST00000545493 CACNA1FO60840 1977 aa27.14■■□□□ 1.94
SCARB1-210ENST00000545493 PDE8AO60658 829 aa27.13■■□□□ 1.93
SCARB1-210ENST00000545493 SPINK5Q9NQ38 1064 aaPredicted RBP27.13■■□□□ 1.93
SCARB1-210ENST00000545493 GPRC5DQ9NZD1 345 aa27.13■■□□□ 1.93
SCARB1-210ENST00000545493 POLLQ9UGP5 575 aa27.13■■□□□ 1.93
SCARB1-210ENST00000545493 NSFL1CQ9UNZ2 370 aaKnown RBP27.13■■□□□ 1.93
SCARB1-210ENST00000545493 HSP90B1P14625 803 aaKnown RBP27.12■■□□□ 1.93
SCARB1-210ENST00000545493 GMPSP49915 693 aaPredicted RBP27.12■■□□□ 1.93
SCARB1-210ENST00000545493 RPS8P62241 208 aaKnown RBP27.12■■□□□ 1.93
SCARB1-210ENST00000545493 CWF19L2Q2TBE0 894 aaKnown RBP27.12■■□□□ 1.93
SCARB1-210ENST00000545493 CCDC152Q4G0S7 254 aa27.12■■□□□ 1.93
SCARB1-210ENST00000545493 CIAPIN1Q6FI81 312 aa27.12■■□□□ 1.93
SCARB1-210ENST00000545493 CNTROBQ8N137 903 aa27.12■■□□□ 1.93
SCARB1-210ENST00000545493 CCDC85AQ96PX6 553 aaPredicted RBP27.12■■□□□ 1.93
SCARB1-210ENST00000545493 CNTNAP1P78357 1384 aa27.11■■□□□ 1.93
SCARB1-210ENST00000545493 RAD17O75943 681 aa27.11■■□□□ 1.93
SCARB1-210ENST00000545493 SLC4A2P04920 1241 aa27.11■■□□□ 1.93
SCARB1-210ENST00000545493 FLIIQ13045 1269 aa27.11■■□□□ 1.93
SCARB1-210ENST00000545493 GPR101Q96P66 508 aaPredicted RBP27.11■■□□□ 1.93
SCARB1-210ENST00000545493 MKRN1Q9UHC7 482 aaKnown RBP27.11■■□□□ 1.93
SCARB1-210ENST00000545493 NEURL1BA8MQ27 555 aa27.1■■□□□ 1.93
SCARB1-210ENST00000545493 USP50Q70EL3 339 aaPredicted RBP27.1■■□□□ 1.93
SCARB1-210ENST00000545493 FAM9BQ8IZU0 186 aa27.1■■□□□ 1.93
SCARB1-210ENST00000545493 SCN9AQ15858 1988 aa27.09■■□□□ 1.93
SCARB1-210ENST00000545493 CTSWP56202 376 aa27.09■■□□□ 1.93
SCARB1-210ENST00000545493 EXOSC9Q06265 439 aaKnown RBP27.09■■□□□ 1.93
SCARB1-210ENST00000545493 WASHC4Q2M389 1173 aa27.09■■□□□ 1.93
SCARB1-210ENST00000545493 TBC1D16Q8TBP0 767 aa27.09■■□□□ 1.93
SCARB1-210ENST00000545493 DBNDD1Q9H9R9 158 aa27.09■■□□□ 1.93
SCARB1-210ENST00000545493 ADARB2Q9NS39 739 aaKnown RBP27.09■■□□□ 1.93
SCARB1-210ENST00000545493 TMEM88BA6NKF7 163 aa27.08■■□□□ 1.93
SCARB1-210ENST00000545493 VAMP4O75379 141 aa27.08■■□□□ 1.93
SCARB1-210ENST00000545493 NEXNQ0ZGT2 675 aa27.08■■□□□ 1.93
SCARB1-210ENST00000545493 PODXL2Q9NZ53 605 aa27.08■■□□□ 1.93
SCARB1-210ENST00000545493 C6orf229H3BNL8 230 aa27.07■■□□□ 1.92
SCARB1-210ENST00000545493 TRPM7Q96QT4 1865 aa27.06■■□□□ 1.92
SCARB1-210ENST00000545493 RIMBP2O15034 1052 aa27.06■■□□□ 1.92
SCARB1-210ENST00000545493 PSME4Q14997 1843 aa27.06■■□□□ 1.92
SCARB1-210ENST00000545493 RTL9Q8NET4 1388 aa27.06■■□□□ 1.92
SCARB1-210ENST00000545493 SHTN1A0MZ66 631 aa27.05■■□□□ 1.92
SCARB1-210ENST00000545493 ECE2O60344 883 aa27.05■■□□□ 1.92
SCARB1-210ENST00000545493 HSPA1AP0DMV8 641 aaKnown RBP27.05■■□□□ 1.92
SCARB1-210ENST00000545493 HSPA1BP0DMV9 641 aaKnown RBP27.05■■□□□ 1.92
SCARB1-210ENST00000545493 FKBP5Q13451 457 aaPredicted RBP27.05■■□□□ 1.92
SCARB1-210ENST00000545493 TNIP1Q15025 636 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms