RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 SASH3O75995 380 aa9.87□□□□□ -0.83
COPA-206ENST00000545266 ARAFP10398 606 aa9.87□□□□□ -0.83
COPA-206ENST00000545266 BMP4P12644 408 aa9.87□□□□□ -0.83
COPA-206ENST00000545266 SRSF11Q05519 484 aaKnown RBP9.87□□□□□ -0.83
COPA-206ENST00000545266 FMR1Q06787 632 aaKnown RBP eCLIP9.87□□□□□ -0.831e-12■■■■□ 19.4
COPA-206ENST00000545266 C8orf34Q49A92 452 aa9.87□□□□□ -0.83
COPA-206ENST00000545266 TREML4Q6UXN2 200 aa9.87□□□□□ -0.83
COPA-206ENST00000545266 KLF15Q9UIH9 416 aa9.87□□□□□ -0.83
COPA-206ENST00000545266 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.87□□□□□ -0.83
COPA-206ENST00000545266 A6NHS1 94 aa9.86□□□□□ -0.83
COPA-206ENST00000545266 SIN3BO75182 1162 aa9.86□□□□□ -0.83
COPA-206ENST00000545266 TNFRSF21O75509 655 aa9.86□□□□□ -0.83
COPA-206ENST00000545266 WFS1O76024 890 aa9.86□□□□□ -0.83
COPA-206ENST00000545266 TARSP26639 723 aaKnown RBP9.86□□□□□ -0.83
COPA-206ENST00000545266 ZNF438Q7Z4V0 828 aa9.86□□□□□ -0.83
COPA-206ENST00000545266 TTC16Q8NEE8 873 aa9.86□□□□□ -0.83
COPA-206ENST00000545266 TMEM63CQ9P1W3 806 aa9.86□□□□□ -0.83
COPA-206ENST00000545266 NSFL1CQ9UNZ2 370 aaKnown RBP9.86□□□□□ -0.83
COPA-206ENST00000545266 SLURP2P0DP57 97 aa9.85□□□□□ -0.83
COPA-206ENST00000545266 ABI2Q9NYB9 513 aaPredicted RBP9.85□□□□□ -0.83
COPA-206ENST00000545266 IGF1RP08069 1367 aa9.85□□□□□ -0.83
COPA-206ENST00000545266 NEFLP07196 543 aa9.84□□□□□ -0.83
COPA-206ENST00000545266 NFKB1P19838 968 aa9.84□□□□□ -0.83
COPA-206ENST00000545266 SOX18P35713 384 aa9.84□□□□□ -0.83
COPA-206ENST00000545266 PLCB3Q01970 1234 aa9.84□□□□□ -0.83
COPA-206ENST00000545266 NEUROD1Q13562 356 aa9.84□□□□□ -0.83
COPA-206ENST00000545266 OR13H1Q8NG92 308 aa9.84□□□□□ -0.83
COPA-206ENST00000545266 SNX29Q8TEQ0 813 aa9.84□□□□□ -0.83
COPA-206ENST00000545266 TLR7Q9NYK1 1049 aaKnown RBP9.84□□□□□ -0.83
COPA-206ENST00000545266 ADARB2-AS1A8MUL3 147 aa9.83□□□□□ -0.84
COPA-206ENST00000545266 MMP20O60882 483 aa9.83□□□□□ -0.84
COPA-206ENST00000545266 GMPRP36959 345 aa9.83□□□□□ -0.84
COPA-206ENST00000545266 SYT9Q86SS6 491 aa9.83□□□□□ -0.84
COPA-206ENST00000545266 TMC1Q8TDI8 760 aa9.83□□□□□ -0.84
COPA-206ENST00000545266 TNFRSF25Q93038 417 aa9.83□□□□□ -0.84
COPA-206ENST00000545266 BHMTQ93088 406 aa9.83□□□□□ -0.84
COPA-206ENST00000545266 PNMA5Q96PV4 448 aa9.83□□□□□ -0.84
COPA-206ENST00000545266 NIF3L1Q9GZT8 377 aa9.83□□□□□ -0.84
COPA-206ENST00000545266 DNAJC25Q9H1X3 360 aa9.83□□□□□ -0.84
COPA-206ENST00000545266 CHRDQ9H2X0 955 aa9.83□□□□□ -0.84
COPA-206ENST00000545266 CNTN3Q9P232 1028 aa9.83□□□□□ -0.84
COPA-206ENST00000545266 PRR12Q9ULL5 1215 aa9.83□□□□□ -0.84
COPA-206ENST00000545266 RARAP10276 462 aa9.82□□□□□ -0.84
COPA-206ENST00000545266 ADH6P28332 368 aa9.82□□□□□ -0.84
COPA-206ENST00000545266 FBXO33Q7Z6M2 555 aa9.82□□□□□ -0.84
COPA-206ENST00000545266 TRPM4Q8TD43 1214 aa9.82□□□□□ -0.84
COPA-206ENST00000545266 ZFYVE28Q9HCC9 887 aa9.82□□□□□ -0.84
COPA-206ENST00000545266 LRRC4BQ9NT99 713 aa9.82□□□□□ -0.84
COPA-206ENST00000545266 NRLP54845 237 aa9.81□□□□□ -0.84
COPA-206ENST00000545266 ENOX2Q16206 610 aaKnown RBP9.81□□□□□ -0.84
COPA-206ENST00000545266 TTC39BQ5VTQ0 682 aaPredicted RBP9.81□□□□□ -0.84
COPA-206ENST00000545266 DHX32Q7L7V1 743 aaKnown RBP9.81□□□□□ -0.84
COPA-206ENST00000545266 RAB44Q7Z6P3 723 aaPredicted RBP9.81□□□□□ -0.84
COPA-206ENST00000545266 PMEPA1Q969W9 287 aa9.81□□□□□ -0.84
COPA-206ENST00000545266 FOXD3Q9UJU5 478 aaPredicted RBP9.81□□□□□ -0.84
COPA-206ENST00000545266 AMOTL2Q9Y2J4 779 aa9.81□□□□□ -0.84
COPA-206ENST00000545266 P4HBP07237 508 aaKnown RBP9.8□□□□□ -0.84
COPA-206ENST00000545266 KRT25Q7Z3Z0 450 aa9.8□□□□□ -0.84
COPA-206ENST00000545266 C1orf127Q8N9H9 656 aa9.8□□□□□ -0.84
COPA-206ENST00000545266 CNTNAP3BQ96NU0 1288 aa9.8□□□□□ -0.84
COPA-206ENST00000545266 CSRNP1Q96S65 589 aa9.8□□□□□ -0.84
COPA-206ENST00000545266 CNTNAP3Q9BZ76 1288 aa9.8□□□□□ -0.84
COPA-206ENST00000545266 GDF2Q9UK05 429 aaPredicted RBP9.8□□□□□ -0.84
COPA-206ENST00000545266 KIF4AO95239 1232 aa9.79□□□□□ -0.84
COPA-206ENST00000545266 ADAMTS2O95450 1211 aa9.79□□□□□ -0.84
COPA-206ENST00000545266 PCBP4P57723 403 aaKnown RBP9.79□□□□□ -0.84
COPA-206ENST00000545266 GPLD1P80108 840 aa9.79□□□□□ -0.84
COPA-206ENST00000545266 ORC1Q13415 861 aa9.79□□□□□ -0.84
COPA-206ENST00000545266 SLCO4C1Q6ZQN7 724 aa9.79□□□□□ -0.84
COPA-206ENST00000545266 FCHSD1Q86WN1 690 aa9.79□□□□□ -0.84
COPA-206ENST00000545266 GOLGA6L1Q8N7Z2 621 aa9.79□□□□□ -0.84
COPA-206ENST00000545266 ACDQ96AP0 544 aa9.79□□□□□ -0.84
COPA-206ENST00000545266 OXCT2Q9BYC2 517 aaPredicted RBP9.79□□□□□ -0.84
COPA-206ENST00000545266 ZBTB42B2RXF5 422 aa9.78□□□□□ -0.84
COPA-206ENST00000545266 EIF1AYO14602 144 aaKnown RBP9.78□□□□□ -0.84
COPA-206ENST00000545266 CPNE3O75131 537 aaKnown RBP9.78□□□□□ -0.84
COPA-206ENST00000545266 PHACTR2O75167 634 aa9.78□□□□□ -0.84
COPA-206ENST00000545266 PLAURQ03405 335 aa9.78□□□□□ -0.84
COPA-206ENST00000545266 PCSK7Q16549 785 aa9.78□□□□□ -0.84
COPA-206ENST00000545266 SALL4Q9UJQ4 1053 aa9.78□□□□□ -0.84
COPA-206ENST00000545266 WIPF1O43516 503 aa9.77□□□□□ -0.85
COPA-206ENST00000545266 PSAPP07602 524 aa9.77□□□□□ -0.85
COPA-206ENST00000545266 GGA1Q9UJY5 639 aa9.77□□□□□ -0.85
COPA-206ENST00000545266 RBM47A0AV96 593 aaKnown RBP9.76□□□□□ -0.85
COPA-206ENST00000545266 NEURL1BA8MQ27 555 aa9.76□□□□□ -0.85
COPA-206ENST00000545266 CYP2E1P05181 493 aaPredicted RBP9.76□□□□□ -0.85
COPA-206ENST00000545266 GALNT12Q8IXK2 581 aa9.76□□□□□ -0.85
COPA-206ENST00000545266 DNAJB12Q9NXW2 375 aaKnown RBP9.76□□□□□ -0.85
COPA-206ENST00000545266 EREGO14944 169 aa9.75□□□□□ -0.85
COPA-206ENST00000545266 EPXP11678 715 aa9.75□□□□□ -0.85
COPA-206ENST00000545266 CES1P23141 567 aa9.75□□□□□ -0.85
COPA-206ENST00000545266 EAPPQ56P03 285 aaPredicted RBP9.75□□□□□ -0.85
COPA-206ENST00000545266 COL13A1Q5TAT6 717 aaPredicted RBP9.75□□□□□ -0.85
COPA-206ENST00000545266 FBF1Q8TES7 1133 aa9.75□□□□□ -0.85
COPA-206ENST00000545266 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.75□□□□□ -0.85
COPA-206ENST00000545266 ELOA3CA0A087WX78 387 aaPredicted RBP9.74□□□□□ -0.85
COPA-206ENST00000545266 ELOA3DA6NLF2 546 aaPredicted RBP9.74□□□□□ -0.85
COPA-206ENST00000545266 HYAL2Q12891 473 aa9.74□□□□□ -0.85
COPA-206ENST00000545266 ELOA3BQ3SY89 546 aa9.74□□□□□ -0.85
COPA-206ENST00000545266 USPL1Q5W0Q7 1092 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms