RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 ZNF521Q96K83 1311 aa16.1■□□□□ 0.17
ACTN1-206ENST00000544964 ZNF853P0CG23 659 aa16.09■□□□□ 0.17
ACTN1-206ENST00000544964 EPS15P42566 896 aa16.09■□□□□ 0.17
ACTN1-206ENST00000544964 GNAI1P63096 354 aa16.09■□□□□ 0.17
ACTN1-206ENST00000544964 CNTROBQ8N137 903 aa16.09■□□□□ 0.17
ACTN1-206ENST00000544964 PLBD2Q8NHP8 589 aa16.09■□□□□ 0.17
ACTN1-206ENST00000544964 ZNF428Q96B54 188 aa16.09■□□□□ 0.17
ACTN1-206ENST00000544964 SPINK5Q9NQ38 1064 aaPredicted RBP16.09■□□□□ 0.17
ACTN1-206ENST00000544964 MBIPQ9NS73 344 aa16.09■□□□□ 0.17
ACTN1-206ENST00000544964 IFT57Q9NWB7 429 aa16.09■□□□□ 0.17
ACTN1-206ENST00000544964 TRMT112Q9UI30 125 aaKnown RBP16.09■□□□□ 0.17
ACTN1-206ENST00000544964 CLEC11AQ9Y240 323 aa16.09■□□□□ 0.17
ACTN1-206ENST00000544964 GRAPQ13588 217 aa16.08■□□□□ 0.16
ACTN1-206ENST00000544964 GRAPLQ8TC17 118 aaPredicted RBP16.08■□□□□ 0.16
ACTN1-206ENST00000544964 YTHDC1Q96MU7 727 aaKnown RBP16.08■□□□□ 0.16
ACTN1-206ENST00000544964 ISCA1Q9BUE6 129 aa16.08■□□□□ 0.16
ACTN1-206ENST00000544964 VPS33BQ9H267 617 aa16.08■□□□□ 0.16
ACTN1-206ENST00000544964 DBF4Q9UBU7 674 aaPredicted RBP16.08■□□□□ 0.16
ACTN1-206ENST00000544964 BBOX1O75936 387 aa16.07■□□□□ 0.16
ACTN1-206ENST00000544964 LMOD1P29536 600 aaPredicted RBP16.07■□□□□ 0.16
ACTN1-206ENST00000544964 VEGFBP49765 207 aa16.07■□□□□ 0.16
ACTN1-206ENST00000544964 DUSP27Q5VZP5 1158 aa16.07■□□□□ 0.16
ACTN1-206ENST00000544964 SP8Q8IXZ3 490 aa16.07■□□□□ 0.16
ACTN1-206ENST00000544964 TNS4Q8IZW8 715 aa16.07■□□□□ 0.16
ACTN1-206ENST00000544964 TSR2Q969E8 191 aaKnown RBP16.07■□□□□ 0.16
ACTN1-206ENST00000544964 IL16Q14005 1332 aa16.07■□□□□ 0.16
ACTN1-206ENST00000544964 RASSF10A6NK89 507 aa16.06■□□□□ 0.16
ACTN1-206ENST00000544964 FMR1Q06787 632 aaKnown RBP eCLIP16.06■□□□□ 0.161e-6■■■□□ 16.5
ACTN1-206ENST00000544964 CXCL9Q07325 125 aa16.06■□□□□ 0.16
ACTN1-206ENST00000544964 GOLGA2Q08379 1002 aa16.06■□□□□ 0.16
ACTN1-206ENST00000544964 KIAA2012Q0VF49 1180 aa16.06■□□□□ 0.16
ACTN1-206ENST00000544964 DPP8Q6V1X1 898 aaPredicted RBP16.06■□□□□ 0.16
ACTN1-206ENST00000544964 ANKRD13DQ6ZTN6 518 aa16.06■□□□□ 0.16
ACTN1-206ENST00000544964 DDX46Q7L014 1031 aaKnown RBP16.06■□□□□ 0.16
ACTN1-206ENST00000544964 SUPT20HQ8NEM7 779 aa16.06■□□□□ 0.16
ACTN1-206ENST00000544964 CDCA7LQ96GN5 454 aa16.06■□□□□ 0.16
ACTN1-206ENST00000544964 GPRC5DQ9NZD1 345 aa16.06■□□□□ 0.16
ACTN1-206ENST00000544964 ATP5J2-PTCD1G3V325 749 aa16.05■□□□□ 0.16
ACTN1-206ENST00000544964 FOXN1O15353 648 aa16.05■□□□□ 0.16
ACTN1-206ENST00000544964 MPNDQ8N594 471 aa16.05■□□□□ 0.16
ACTN1-206ENST00000544964 ZNRF3Q9ULT6 936 aa16.05■□□□□ 0.16
ACTN1-206ENST00000544964 SCN9AQ15858 1988 aa16.04■□□□□ 0.16
ACTN1-206ENST00000544964 USP50Q70EL3 339 aaPredicted RBP16.04■□□□□ 0.16
ACTN1-206ENST00000544964 FAM89AQ96GI7 184 aa16.04■□□□□ 0.16
ACTN1-206ENST00000544964 TMX4Q9H1E5 349 aaPredicted RBP16.04■□□□□ 0.16
ACTN1-206ENST00000544964 HYPKQ9NX55 129 aa16.04■□□□□ 0.16
ACTN1-206ENST00000544964 ZBED9Q6R2W3 1325 aa16.03■□□□□ 0.16
ACTN1-206ENST00000544964 CDHR2Q9BYE9 1310 aa16.03■□□□□ 0.16
ACTN1-206ENST00000544964 FANCIQ9NVI1 1328 aa16.03■□□□□ 0.16
ACTN1-206ENST00000544964 YDJCA8MPS7 323 aa16.03■□□□□ 0.16
ACTN1-206ENST00000544964 TRAF5O00463 557 aa16.03■□□□□ 0.16
ACTN1-206ENST00000544964 GMPSP49915 693 aaPredicted RBP16.03■□□□□ 0.16
ACTN1-206ENST00000544964 TRIM28Q13263 835 aaKnown RBP16.03■□□□□ 0.16
ACTN1-206ENST00000544964 SF3B3Q15393 1217 aaKnown RBP16.03■□□□□ 0.16
ACTN1-206ENST00000544964 TMC4Q7Z404 712 aa16.03■□□□□ 0.16
ACTN1-206ENST00000544964 CELF1Q92879 486 aaKnown RBP16.03■□□□□ 0.16
ACTN1-206ENST00000544964 ADARB2Q9NS39 739 aaKnown RBP16.03■□□□□ 0.16
ACTN1-206ENST00000544964 SLFN5Q08AF3 891 aa16.02■□□□□ 0.16
ACTN1-206ENST00000544964 MYH16Q9H6N6 1097 aa16.02■□□□□ 0.16
ACTN1-206ENST00000544964 PHAXQ9H814 394 aaKnown RBP16.02■□□□□ 0.16
ACTN1-206ENST00000544964 E9PSI1 815 aa16.01■□□□□ 0.15
ACTN1-206ENST00000544964 ELL2O00472 640 aaPredicted RBP16.01■□□□□ 0.15
ACTN1-206ENST00000544964 CIAPIN1Q6FI81 312 aa16.01■□□□□ 0.15
ACTN1-206ENST00000544964 C8orf58Q8NAV2 365 aa16.01■□□□□ 0.15
ACTN1-206ENST00000544964 WBP1LQ9NX94 342 aa16.01■□□□□ 0.15
ACTN1-206ENST00000544964 ABT1Q9ULW3 272 aaKnown RBP16.01■□□□□ 0.15
ACTN1-206ENST00000544964 PSME4Q14997 1843 aa16.01■□□□□ 0.15
ACTN1-206ENST00000544964 MYH3P11055 1940 aa16■□□□□ 0.15
ACTN1-206ENST00000544964 SHTN1A0MZ66 631 aa16■□□□□ 0.15
ACTN1-206ENST00000544964 IRS4O14654 1257 aaPredicted RBP16■□□□□ 0.15
ACTN1-206ENST00000544964 CAPN15O75808 1086 aa16■□□□□ 0.15
ACTN1-206ENST00000544964 RAD17O75943 681 aa16■□□□□ 0.15
ACTN1-206ENST00000544964 DEFB115Q30KQ5 88 aa16■□□□□ 0.15
ACTN1-206ENST00000544964 RTL5Q5HYW3 569 aaPredicted RBP16■□□□□ 0.15
ACTN1-206ENST00000544964 CST9Q5W186 159 aa16■□□□□ 0.15
ACTN1-206ENST00000544964 TRPM4Q8TD43 1214 aa16■□□□□ 0.15
ACTN1-206ENST00000544964 GPSM2P81274 684 aa15.99■□□□□ 0.15
ACTN1-206ENST00000544964 EXOSC9Q06265 439 aaKnown RBP15.99■□□□□ 0.15
ACTN1-206ENST00000544964 TSPYL6Q8N831 410 aa15.99■□□□□ 0.15
ACTN1-206ENST00000544964 SPEF2Q9C093 1822 aa15.98■□□□□ 0.15
ACTN1-206ENST00000544964 WDR33Q9C0J8 1336 aaKnown RBP15.98■□□□□ 0.15
ACTN1-206ENST00000544964 HIRAP54198 1017 aaPredicted RBP15.98■□□□□ 0.15
ACTN1-206ENST00000544964 ZBTB38Q8NAP3 1195 aaPredicted RBP15.98■□□□□ 0.15
ACTN1-206ENST00000544964 PRDM10Q9NQV6 1147 aa15.98■□□□□ 0.15
ACTN1-206ENST00000544964 POLLQ9UGP5 575 aa15.98■□□□□ 0.15
ACTN1-206ENST00000544964 PGAP2Q9UHJ9 254 aa15.98■□□□□ 0.15
ACTN1-206ENST00000544964 POLR2AP24928 1970 aaKnown RBP15.97■□□□□ 0.15
ACTN1-206ENST00000544964 ZNF646O15015 1829 aaPredicted RBP15.97■□□□□ 0.15
ACTN1-206ENST00000544964 CTCFP49711 727 aaPredicted RBP15.97■□□□□ 0.15
ACTN1-206ENST00000544964 TNIP1Q15025 636 aa15.97■□□□□ 0.15
ACTN1-206ENST00000544964 RIC3Q7Z5B4 369 aa15.97■□□□□ 0.15
ACTN1-206ENST00000544964 TRMT2AQ8IZ69 625 aaKnown RBP15.97■□□□□ 0.15
ACTN1-206ENST00000544964 AIDAQ96BJ3 306 aa15.97■□□□□ 0.15
ACTN1-206ENST00000544964 MYD88Q99836 296 aa15.97■□□□□ 0.15
ACTN1-206ENST00000544964 GLIS2Q9BZE0 524 aaPredicted RBP15.97■□□□□ 0.15
ACTN1-206ENST00000544964 DBNDD1Q9H9R9 158 aa15.97■□□□□ 0.15
ACTN1-206ENST00000544964 NSFL1CQ9UNZ2 370 aaKnown RBP15.97■□□□□ 0.15
ACTN1-206ENST00000544964 TLL2Q9Y6L7 1015 aa15.97■□□□□ 0.15
ACTN1-206ENST00000544964 RTL9Q8NET4 1388 aa15.97■□□□□ 0.15
ACTN1-206ENST00000544964 PSMD14O00487 310 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms