RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 COPRSQ9NQ92 184 aa8.69□□□□□ -1.02
HMGCS2-204ENST00000544913 RIC1Q4ADV7 1423 aa8.69□□□□□ -1.02
HMGCS2-204ENST00000544913 CARMIL3Q8ND23 1372 aa8.68□□□□□ -1.02
HMGCS2-204ENST00000544913 SMARCA5O60264 1052 aaPredicted RBP8.68□□□□□ -1.02
HMGCS2-204ENST00000544913 HMMRO75330 724 aa8.68□□□□□ -1.02
HMGCS2-204ENST00000544913 HCLS1P14317 486 aaPredicted RBP8.68□□□□□ -1.02
HMGCS2-204ENST00000544913 BAG6P46379 1132 aa8.68□□□□□ -1.02
HMGCS2-204ENST00000544913 CTSWP56202 376 aa8.68□□□□□ -1.02
HMGCS2-204ENST00000544913 ERFEQ4G0M1 354 aa8.68□□□□□ -1.02
HMGCS2-204ENST00000544913 SLC10A5Q5PT55 438 aa8.68□□□□□ -1.02
HMGCS2-204ENST00000544913 NPM2Q86SE8 214 aaKnown RBP8.68□□□□□ -1.02
HMGCS2-204ENST00000544913 CHD1LQ86WJ1 897 aa8.68□□□□□ -1.02
HMGCS2-204ENST00000544913 TFCP2L1Q9NZI6 479 aa8.68□□□□□ -1.02
HMGCS2-204ENST00000544913 RTL9Q8NET4 1388 aa8.68□□□□□ -1.02
HMGCS2-204ENST00000544913 POLRMTO00411 1230 aaKnown RBP8.68□□□□□ -1.02
HMGCS2-204ENST00000544913 SASH1O94885 1247 aa8.68□□□□□ -1.02
HMGCS2-204ENST00000544913 BICDL1Q6ZP65 573 aa8.68□□□□□ -1.02
HMGCS2-204ENST00000544913 ATG9AQ7Z3C6 839 aa8.68□□□□□ -1.02
HMGCS2-204ENST00000544913 CCDC125Q86Z20 511 aa8.68□□□□□ -1.02
HMGCS2-204ENST00000544913 UPF1Q92900 1129 aaKnown RBP eCLIP8.68□□□□□ -1.02
HMGCS2-204ENST00000544913 LNPKQ9C0E8 428 aa8.68□□□□□ -1.02
HMGCS2-204ENST00000544913 GREM2Q9H772 168 aa8.68□□□□□ -1.02
HMGCS2-204ENST00000544913 ANKRD31Q8N7Z5 1873 aa8.67□□□□□ -1.02
HMGCS2-204ENST00000544913 FAM177BA6PVY3 158 aa8.67□□□□□ -1.02
HMGCS2-204ENST00000544913 PDE8AO60658 829 aa8.67□□□□□ -1.02
HMGCS2-204ENST00000544913 C16orf71Q8IYS4 520 aaPredicted RBP8.67□□□□□ -1.02
HMGCS2-204ENST00000544913 HDAC5Q9UQL6 1122 aa8.67□□□□□ -1.02
HMGCS2-204ENST00000544913 SURF6O75683 361 aaKnown RBP8.66□□□□□ -1.02
HMGCS2-204ENST00000544913 ANKRD45Q5TZF3 282 aa8.66□□□□□ -1.02
HMGCS2-204ENST00000544913 PRR5LQ6MZQ0 368 aa8.66□□□□□ -1.02
HMGCS2-204ENST00000544913 ZNF594Q96JF6 807 aaPredicted RBP8.66□□□□□ -1.02
HMGCS2-204ENST00000544913 SETDB2Q96T68 719 aa8.66□□□□□ -1.02
HMGCS2-204ENST00000544913 TAF1P21675 1872 aa8.66□□□□□ -1.02
HMGCS2-204ENST00000544913 SF3B3Q15393 1217 aaKnown RBP8.66□□□□□ -1.02
HMGCS2-204ENST00000544913 PLEKHM2Q8IWE5 1019 aa8.66□□□□□ -1.02
HMGCS2-204ENST00000544913 CCDC24Q8N4L8 307 aa8.66□□□□□ -1.02
HMGCS2-204ENST00000544913 RHPN1Q8TCX5 695 aa8.66□□□□□ -1.02
HMGCS2-204ENST00000544913 CCDC85AQ96PX6 553 aaPredicted RBP8.66□□□□□ -1.02
HMGCS2-204ENST00000544913 PUS3Q9BZE2 481 aaKnown RBP8.66□□□□□ -1.02
HMGCS2-204ENST00000544913 A0A1B0GUL6 1792 aa8.65□□□□□ -1.02
HMGCS2-204ENST00000544913 APBB1O00213 710 aa8.65□□□□□ -1.02
HMGCS2-204ENST00000544913 EIF5BO60841 1220 aaKnown RBP8.65□□□□□ -1.02
HMGCS2-204ENST00000544913 HMGB2P26583 209 aaKnown RBP8.65□□□□□ -1.02
HMGCS2-204ENST00000544913 RGS3P49796 1198 aa8.65□□□□□ -1.02
HMGCS2-204ENST00000544913 LRRC24Q50LG9 513 aa8.65□□□□□ -1.02
HMGCS2-204ENST00000544913 ILDR2Q71H61 639 aa8.65□□□□□ -1.02
HMGCS2-204ENST00000544913 SLC51AQ86UW1 340 aa8.65□□□□□ -1.02
HMGCS2-204ENST00000544913 NBPF5PQ86XG9 351 aaPredicted RBP8.65□□□□□ -1.02
HMGCS2-204ENST00000544913 FLAD1Q8NFF5 587 aa8.65□□□□□ -1.02
HMGCS2-204ENST00000544913 CNKSR2Q8WXI2 1034 aa8.65□□□□□ -1.02
HMGCS2-204ENST00000544913 IL1RAPL2Q9NP60 686 aa8.65□□□□□ -1.02
HMGCS2-204ENST00000544913 COL11A2P13942 1736 aaPredicted RBP8.65□□□□□ -1.03
HMGCS2-204ENST00000544913 KLRG2A4D1S0 409 aaPredicted RBP8.64□□□□□ -1.03
HMGCS2-204ENST00000544913 RAB11FIP3O75154 756 aa8.64□□□□□ -1.03
HMGCS2-204ENST00000544913 ITGA6P23229 1130 aa8.64□□□□□ -1.03
HMGCS2-204ENST00000544913 SF3B2Q13435 895 aaKnown RBP8.64□□□□□ -1.03
HMGCS2-204ENST00000544913 C8orf34Q49A92 452 aa8.64□□□□□ -1.03
HMGCS2-204ENST00000544913 VGLL2Q8N8G2 317 aa8.64□□□□□ -1.03
HMGCS2-204ENST00000544913 LRRCC1Q9C099 1032 aa8.64□□□□□ -1.03
HMGCS2-204ENST00000544913 SIL1Q9H173 461 aa8.64□□□□□ -1.03
HMGCS2-204ENST00000544913 SEC31BQ9NQW1 1179 aa8.64□□□□□ -1.03
HMGCS2-204ENST00000544913 STK32BQ9NY57 414 aa8.64□□□□□ -1.03
HMGCS2-204ENST00000544913 EYA2O00167 538 aa8.64□□□□□ -1.03
HMGCS2-204ENST00000544913 CIAO1O76071 339 aa8.64□□□□□ -1.03
HMGCS2-204ENST00000544913 SERPINB2P05120 415 aa8.64□□□□□ -1.03
HMGCS2-204ENST00000544913 GSPT1P15170 499 aaKnown RBP8.64□□□□□ -1.03
HMGCS2-204ENST00000544913 CRY2Q49AN0 593 aa8.64□□□□□ -1.03
HMGCS2-204ENST00000544913 EAF2Q96CJ1 260 aaPredicted RBP8.64□□□□□ -1.03
HMGCS2-204ENST00000544913 KIF1BPQ96EK5 621 aa8.64□□□□□ -1.03
HMGCS2-204ENST00000544913 NYXQ9GZU5 481 aa8.64□□□□□ -1.03
HMGCS2-204ENST00000544913 RIPOR2Q9Y4F9 1068 aa8.64□□□□□ -1.03
HMGCS2-204ENST00000544913 ZNF609O15014 1411 aa8.63□□□□□ -1.03
HMGCS2-204ENST00000544913 MMP10P09238 476 aa8.63□□□□□ -1.03
HMGCS2-204ENST00000544913 MSL1Q68DK7 614 aa8.63□□□□□ -1.03
HMGCS2-204ENST00000544913 TPTE2Q6XPS3 522 aa8.63□□□□□ -1.03
HMGCS2-204ENST00000544913 NLGN1Q8N2Q7 840 aa8.63□□□□□ -1.03
HMGCS2-204ENST00000544913 CNBD1Q8NA66 436 aa8.63□□□□□ -1.03
HMGCS2-204ENST00000544913 OSBPL3Q9H4L5 887 aa8.63□□□□□ -1.03
HMGCS2-204ENST00000544913 UPF2Q9HAU5 1272 aaKnown RBP8.63□□□□□ -1.03
HMGCS2-204ENST00000544913 TLR7Q9NYK1 1049 aaKnown RBP8.63□□□□□ -1.03
HMGCS2-204ENST00000544913 STAP2Q9UGK3 403 aa8.63□□□□□ -1.03
HMGCS2-204ENST00000544913 SPEF2Q9C093 1822 aa8.63□□□□□ -1.03
HMGCS2-204ENST00000544913 NPM3O75607 178 aaKnown RBP8.62□□□□□ -1.03
HMGCS2-204ENST00000544913 TFCP2Q12800 502 aa8.62□□□□□ -1.03
HMGCS2-204ENST00000544913 TSHZ3Q63HK5 1081 aa8.62□□□□□ -1.03
HMGCS2-204ENST00000544913 CHMP3Q9Y3E7 222 aa8.62□□□□□ -1.03
HMGCS2-204ENST00000544913 PDE1AP54750 535 aa8.62□□□□□ -1.03
HMGCS2-204ENST00000544913 IFIT5Q13325 482 aaKnown RBP8.62□□□□□ -1.03
HMGCS2-204ENST00000544913 CCDC57Q2TAC2 916 aa8.62□□□□□ -1.03
HMGCS2-204ENST00000544913 HSP90AB4PQ58FF6 505 aa8.62□□□□□ -1.03
HMGCS2-204ENST00000544913 ERC1Q8IUD2 1116 aa8.62□□□□□ -1.03
HMGCS2-204ENST00000544913 PI4K2BQ8TCG2 481 aa8.62□□□□□ -1.03
HMGCS2-204ENST00000544913 CELF1Q92879 486 aaKnown RBP8.62□□□□□ -1.03
HMGCS2-204ENST00000544913 DBNLQ9UJU6 430 aaKnown RBP8.62□□□□□ -1.03
HMGCS2-204ENST00000544913 FBXO3Q9UK99 471 aa8.62□□□□□ -1.03
HMGCS2-204ENST00000544913 GOLGB1Q14789 3259 aaKnown RBP8.61□□□□□ -1.03
HMGCS2-204ENST00000544913 LTBP1Q14766 1721 aa8.61□□□□□ -1.03
HMGCS2-204ENST00000544913 ARAP2Q8WZ64 1704 aa8.61□□□□□ -1.03
HMGCS2-204ENST00000544913 IL15P40933 162 aaPredicted RBP8.61□□□□□ -1.03
HMGCS2-204ENST00000544913 G3BP1Q13283 466 aaKnown RBP eCLIP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms