RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 SPA17Q15506 151 aa10.45□□□□□ -0.74
NECAP1-207ENST00000544891 MAP9Q49MG5 647 aa10.45□□□□□ -0.74
NECAP1-207ENST00000544891 XRN1Q8IZH2 1706 aaKnown RBP10.45□□□□□ -0.74
NECAP1-207ENST00000544891 EMILIN1Q9Y6C2 1016 aa10.45□□□□□ -0.74
NECAP1-207ENST00000544891 CPSF1Q10570 1443 aaKnown RBP10.45□□□□□ -0.74
NECAP1-207ENST00000544891 STXBP4Q6ZWJ1 553 aa10.45□□□□□ -0.74
NECAP1-207ENST00000544891 SPC24Q8NBT2 197 aa10.45□□□□□ -0.74
NECAP1-207ENST00000544891 UBXN4Q92575 508 aa10.45□□□□□ -0.74
NECAP1-207ENST00000544891 BOLA2Q9H3K6 86 aa10.45□□□□□ -0.74
NECAP1-207ENST00000544891 ZSCAN16Q9H4T2 348 aaPredicted RBP10.45□□□□□ -0.74
NECAP1-207ENST00000544891 LRRFIP2Q9Y608 721 aaKnown RBP10.45□□□□□ -0.74
NECAP1-207ENST00000544891 PTCD1O75127 700 aaKnown RBP10.44□□□□□ -0.74
NECAP1-207ENST00000544891 KIAA0754O94854 1291 aa10.44□□□□□ -0.74
NECAP1-207ENST00000544891 NEFHP12036 1026 aa10.44□□□□□ -0.74
NECAP1-207ENST00000544891 USP8P40818 1118 aa10.44□□□□□ -0.74
NECAP1-207ENST00000544891 UVSSAQ2YD98 709 aa10.44□□□□□ -0.74
NECAP1-207ENST00000544891 CCDC194A0A1B0GVG4 234 aa10.44□□□□□ -0.74
NECAP1-207ENST00000544891 MAP4K4O95819 1239 aaPredicted RBP10.44□□□□□ -0.74
NECAP1-207ENST00000544891 CETN1Q12798 172 aa10.44□□□□□ -0.74
NECAP1-207ENST00000544891 USP54Q70EL1 1684 aa10.44□□□□□ -0.74
NECAP1-207ENST00000544891 BAG4O95429 457 aaKnown RBP10.44□□□□□ -0.74
NECAP1-207ENST00000544891 SSRP1Q08945 709 aaKnown RBP10.44□□□□□ -0.74
NECAP1-207ENST00000544891 KIAA1328Q86T90 577 aa10.44□□□□□ -0.74
NECAP1-207ENST00000544891 TRMT2AQ8IZ69 625 aaKnown RBP10.44□□□□□ -0.74
NECAP1-207ENST00000544891 RBM27Q9P2N5 1060 aaKnown RBP10.44□□□□□ -0.74
NECAP1-207ENST00000544891 CDK12Q9NYV4 1490 aaPredicted RBP10.44□□□□□ -0.74
NECAP1-207ENST00000544891 ANKARQ7Z5J8 1434 aa10.44□□□□□ -0.74
NECAP1-207ENST00000544891 GSTO1P78417 241 aa10.44□□□□□ -0.74
NECAP1-207ENST00000544891 PDE4BQ07343 736 aa10.44□□□□□ -0.74
NECAP1-207ENST00000544891 ZGPATQ8N5A5 531 aaKnown RBP10.44□□□□□ -0.74
NECAP1-207ENST00000544891 SMARCC1Q92922 1105 aaPredicted RBP10.44□□□□□ -0.74
NECAP1-207ENST00000544891 NPHP3Q7Z494 1330 aa10.43□□□□□ -0.74
NECAP1-207ENST00000544891 FOXO3O43524 673 aa10.43□□□□□ -0.74
NECAP1-207ENST00000544891 GNAQP50148 359 aa10.43□□□□□ -0.74
NECAP1-207ENST00000544891 TSPYL1Q9H0U9 437 aa10.43□□□□□ -0.74
NECAP1-207ENST00000544891 FILIP1Q7Z7B0 1213 aa10.43□□□□□ -0.74
NECAP1-207ENST00000544891 FAM114A1Q8IWE2 563 aa10.43□□□□□ -0.74
NECAP1-207ENST00000544891 RPGRQ92834 1020 aaKnown RBP10.43□□□□□ -0.74
NECAP1-207ENST00000544891 THUMPD2Q9BTF0 503 aaKnown RBP10.43□□□□□ -0.74
NECAP1-207ENST00000544891 ADAMTS13Q76LX8 1427 aa10.43□□□□□ -0.74
NECAP1-207ENST00000544891 IFIT3O14879 490 aaKnown RBP10.42□□□□□ -0.74
NECAP1-207ENST00000544891 USO1O60763 962 aaKnown RBP10.42□□□□□ -0.74
NECAP1-207ENST00000544891 KIF18AQ8NI77 898 aa10.42□□□□□ -0.74
NECAP1-207ENST00000544891 GOLGA8AA7E2F4 631 aa10.42□□□□□ -0.74
NECAP1-207ENST00000544891 GOLGA8BA8MQT2 603 aa10.42□□□□□ -0.74
NECAP1-207ENST00000544891 TCP11L1Q9NUJ3 509 aa10.42□□□□□ -0.74
NECAP1-207ENST00000544891 MINDY4BA8MYZ0 360 aa10.42□□□□□ -0.74
NECAP1-207ENST00000544891 POTEB2H3BUK9 544 aa10.42□□□□□ -0.74
NECAP1-207ENST00000544891 NBPF7P0C2Y1 421 aaPredicted RBP10.42□□□□□ -0.74
NECAP1-207ENST00000544891 NALCNQ8IZF0 1738 aa10.42□□□□□ -0.74
NECAP1-207ENST00000544891 ADAMTSL3P82987 1691 aa10.42□□□□□ -0.74
NECAP1-207ENST00000544891 KIF5CO60282 957 aa10.42□□□□□ -0.74
NECAP1-207ENST00000544891 KDM4AO75164 1064 aa10.42□□□□□ -0.74
NECAP1-207ENST00000544891 IARSP41252 1262 aaKnown RBP10.42□□□□□ -0.74
NECAP1-207ENST00000544891 LDHAL6AQ6ZMR3 332 aa10.42□□□□□ -0.74
NECAP1-207ENST00000544891 NCOA7Q8NI08 942 aa10.42□□□□□ -0.74
NECAP1-207ENST00000544891 DDX11Q96FC9 970 aa10.42□□□□□ -0.74
NECAP1-207ENST00000544891 BABAM1Q9NWV8 329 aa10.42□□□□□ -0.74
NECAP1-207ENST00000544891 ACEP12821 1306 aa10.42□□□□□ -0.74
NECAP1-207ENST00000544891 CNNM2Q9H8M5 875 aa10.41□□□□□ -0.74
NECAP1-207ENST00000544891 METP08581 1390 aa10.41□□□□□ -0.74
NECAP1-207ENST00000544891 PATL2C9JE40 543 aaKnown RBP10.41□□□□□ -0.74
NECAP1-207ENST00000544891 PTPN14Q15678 1187 aa10.41□□□□□ -0.74
NECAP1-207ENST00000544891 PNPLA6Q8IY17 1366 aa10.41□□□□□ -0.74
NECAP1-207ENST00000544891 TUBB4AP04350 444 aa10.41□□□□□ -0.74
NECAP1-207ENST00000544891 TOP1P11387 765 aaKnown RBP10.41□□□□□ -0.74
NECAP1-207ENST00000544891 TTC22Q5TAA0 569 aa10.41□□□□□ -0.74
NECAP1-207ENST00000544891 MPRIPQ6WCQ1 1025 aa10.41□□□□□ -0.74
NECAP1-207ENST00000544891 DDX46Q7L014 1031 aaKnown RBP10.41□□□□□ -0.74
NECAP1-207ENST00000544891 ANKIB1Q9P2G1 1089 aa10.41□□□□□ -0.74
NECAP1-207ENST00000544891 MSH6P52701 1360 aa10.41□□□□□ -0.74
NECAP1-207ENST00000544891 HLA-DOAP06340 250 aa10.41□□□□□ -0.74
NECAP1-207ENST00000544891 ANKRD13DQ6ZTN6 518 aa10.41□□□□□ -0.74
NECAP1-207ENST00000544891 YEATS4O95619 227 aa10.4□□□□□ -0.74
NECAP1-207ENST00000544891 PAFAH1B1P43034 410 aa10.4□□□□□ -0.74
NECAP1-207ENST00000544891 CALML4Q96GE6 196 aa10.4□□□□□ -0.74
NECAP1-207ENST00000544891 KRT23Q9C075 422 aa10.4□□□□□ -0.74
NECAP1-207ENST00000544891 GBP2P32456 591 aaPredicted RBP10.4□□□□□ -0.74
NECAP1-207ENST00000544891 XPCQ01831 940 aaPredicted RBP10.4□□□□□ -0.74
NECAP1-207ENST00000544891 SPAG1Q07617 926 aa10.4□□□□□ -0.74
NECAP1-207ENST00000544891 CCDC152Q4G0S7 254 aa10.4□□□□□ -0.74
NECAP1-207ENST00000544891 ANKRD44Q8N8A2 993 aa10.4□□□□□ -0.74
NECAP1-207ENST00000544891 NEK1Q96PY6 1258 aa10.4□□□□□ -0.74
NECAP1-207ENST00000544891 CALRP27797 417 aaKnown RBP10.4□□□□□ -0.74
NECAP1-207ENST00000544891 IL15P40933 162 aaPredicted RBP10.4□□□□□ -0.74
NECAP1-207ENST00000544891 AKAP4Q5JQC9 854 aa10.4□□□□□ -0.74
NECAP1-207ENST00000544891 MBIPQ9NS73 344 aa10.4□□□□□ -0.74
NECAP1-207ENST00000544891 MAP3K2Q9Y2U5 619 aa10.4□□□□□ -0.74
NECAP1-207ENST00000544891 TBX22Q9Y458 520 aa10.4□□□□□ -0.74
NECAP1-207ENST00000544891 FMN2Q9NZ56 1722 aa10.4□□□□□ -0.75
NECAP1-207ENST00000544891 RANBP6O60518 1105 aaKnown RBP10.4□□□□□ -0.75
NECAP1-207ENST00000544891 NLRP5P59047 1200 aa10.4□□□□□ -0.75
NECAP1-207ENST00000544891 UBE2HP62256 183 aa10.4□□□□□ -0.75
NECAP1-207ENST00000544891 STX1AQ16623 288 aa10.4□□□□□ -0.75
NECAP1-207ENST00000544891 CACNA2D4Q7Z3S7 1137 aa10.4□□□□□ -0.75
NECAP1-207ENST00000544891 CNNM3Q8NE01 707 aa10.4□□□□□ -0.75
NECAP1-207ENST00000544891 ANKRD24Q8TF21 1146 aa10.4□□□□□ -0.75
NECAP1-207ENST00000544891 CRACR2AQ9BSW2 395 aa10.4□□□□□ -0.75
NECAP1-207ENST00000544891 RMND1Q9NWS8 449 aa10.4□□□□□ -0.75
NECAP1-207ENST00000544891 MIS18AQ9NYP9 233 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms