RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 ZNF277Q9NRM2 450 aaPredicted RBP12.13□□□□□ -0.47
CIT-216ENST00000544872 NBPF26B4DH59 902 aa12.12□□□□□ -0.47
CIT-216ENST00000544872 H0YGN5 161 aa12.12□□□□□ -0.47
CIT-216ENST00000544872 ST5P78524 1137 aa12.12□□□□□ -0.47
CIT-216ENST00000544872 NEXNQ0ZGT2 675 aa12.12□□□□□ -0.47
CIT-216ENST00000544872 KRT24Q2M2I5 525 aa12.12□□□□□ -0.47
CIT-216ENST00000544872 NBPF10Q6P3W6 841 aaKnown RBP12.12□□□□□ -0.47
CIT-216ENST00000544872 CCDC24Q8N4L8 307 aa12.12□□□□□ -0.47
CIT-216ENST00000544872 XAGE3Q8WTP9 111 aa12.12□□□□□ -0.47
CIT-216ENST00000544872 NYXQ9GZU5 481 aa12.12□□□□□ -0.47
CIT-216ENST00000544872 MAP3K15Q6ZN16 1313 aa12.11□□□□□ -0.47
CIT-216ENST00000544872 ZNF521Q96K83 1311 aa12.11□□□□□ -0.47
CIT-216ENST00000544872 PDE6BP35913 854 aa12.11□□□□□ -0.47
CIT-216ENST00000544872 EPS15P42566 896 aa12.11□□□□□ -0.47
CIT-216ENST00000544872 USP50Q70EL3 339 aaPredicted RBP12.11□□□□□ -0.47
CIT-216ENST00000544872 PPP1R42Q7Z4L9 355 aa12.11□□□□□ -0.47
CIT-216ENST00000544872 NBPF5PQ86XG9 351 aaPredicted RBP12.11□□□□□ -0.47
CIT-216ENST00000544872 CNKSR1Q969H4 720 aa12.11□□□□□ -0.47
CIT-216ENST00000544872 OTUD5Q96G74 571 aa12.11□□□□□ -0.47
CIT-216ENST00000544872 ZBTB3Q9H5J0 574 aa12.11□□□□□ -0.47
CIT-216ENST00000544872 RBM27Q9P2N5 1060 aaKnown RBP12.11□□□□□ -0.47
CIT-216ENST00000544872 PDZRN3Q9UPQ7 1066 aa12.11□□□□□ -0.47
CIT-216ENST00000544872 NIP7Q9Y221 180 aaKnown RBP eCLIP12.11□□□□□ -0.47
CIT-216ENST00000544872 COL6A3P12111 3177 aa12.11□□□□□ -0.47
CIT-216ENST00000544872 CARMIL3Q8ND23 1372 aa12.1□□□□□ -0.47
CIT-216ENST00000544872 VAMP4O75379 141 aa12.1□□□□□ -0.47
CIT-216ENST00000544872 CAMTA2O94983 1202 aa12.1□□□□□ -0.47
CIT-216ENST00000544872 PARP10Q53GL7 1025 aa12.1□□□□□ -0.47
CIT-216ENST00000544872 TSPYL6Q8N831 410 aa12.1□□□□□ -0.47
CIT-216ENST00000544872 PLBD2Q8NHP8 589 aa12.1□□□□□ -0.47
CIT-216ENST00000544872 GLIS2Q9BZE0 524 aaPredicted RBP12.1□□□□□ -0.47
CIT-216ENST00000544872 ZBED9Q6R2W3 1325 aa12.1□□□□□ -0.47
CIT-216ENST00000544872 KIAA0100Q14667 2235 aaKnown RBP12.09□□□□□ -0.47
CIT-216ENST00000544872 EIF6P56537 245 aaKnown RBP12.09□□□□□ -0.47
CIT-216ENST00000544872 FKBP5Q13451 457 aaPredicted RBP12.09□□□□□ -0.47
CIT-216ENST00000544872 CCDC93Q567U6 631 aa12.09□□□□□ -0.47
CIT-216ENST00000544872 RGMBQ6NW40 437 aa12.09□□□□□ -0.47
CIT-216ENST00000544872 PRPF40BQ6NWY9 871 aaKnown RBP12.09□□□□□ -0.47
CIT-216ENST00000544872 GIGYF2Q6Y7W6 1299 aaKnown RBP12.09□□□□□ -0.47
CIT-216ENST00000544872 CNBD1Q8NA66 436 aa12.09□□□□□ -0.47
CIT-216ENST00000544872 ZNF296Q8WUU4 475 aaPredicted RBP12.09□□□□□ -0.47
CIT-216ENST00000544872 CCDC102AQ96A19 550 aa12.09□□□□□ -0.47
CIT-216ENST00000544872 MKI67P46013 3256 aaKnown RBP12.09□□□□□ -0.47
CIT-216ENST00000544872 AKAP11Q9UKA4 1901 aa12.08□□□□□ -0.48
CIT-216ENST00000544872 ZNF831Q5JPB2 1677 aa12.08□□□□□ -0.48
CIT-216ENST00000544872 ANXA1P04083 346 aa12.08□□□□□ -0.48
CIT-216ENST00000544872 ZNF157P51786 506 aaPredicted RBP12.08□□□□□ -0.48
CIT-216ENST00000544872 PDIA6Q15084 440 aa12.08□□□□□ -0.48
CIT-216ENST00000544872 TBC1D9BQ66K14 1250 aa12.08□□□□□ -0.48
CIT-216ENST00000544872 INTS3Q68E01 1043 aaKnown RBP12.08□□□□□ -0.48
CIT-216ENST00000544872 TTLL7Q6ZT98 887 aa12.08□□□□□ -0.48
CIT-216ENST00000544872 JDP2Q8WYK2 163 aa12.08□□□□□ -0.48
CIT-216ENST00000544872 FAM122AQ96E09 287 aa12.08□□□□□ -0.48
CIT-216ENST00000544872 AFDNP55196 1824 aaKnown RBP12.07□□□□□ -0.48
CIT-216ENST00000544872 IPO8O15397 1037 aaKnown RBP12.07□□□□□ -0.48
CIT-216ENST00000544872 EN2P19622 333 aaPredicted RBP12.07□□□□□ -0.48
CIT-216ENST00000544872 FKBP4Q02790 459 aaKnown RBP eCLIP12.07□□□□□ -0.48
CIT-216ENST00000544872 TCIRG1Q13488 830 aa12.07□□□□□ -0.48
CIT-216ENST00000544872 ALDH1L2Q3SY69 923 aa12.07□□□□□ -0.48
CIT-216ENST00000544872 KSR2Q6VAB6 950 aa12.07□□□□□ -0.48
CIT-216ENST00000544872 CDCA7LQ96GN5 454 aa12.07□□□□□ -0.48
CIT-216ENST00000544872 UTP14AQ9BVJ6 771 aaKnown RBP12.07□□□□□ -0.48
CIT-216ENST00000544872 TMX4Q9H1E5 349 aaPredicted RBP12.07□□□□□ -0.48
CIT-216ENST00000544872 SPINK5Q9NQ38 1064 aaPredicted RBP12.07□□□□□ -0.48
CIT-216ENST00000544872 FAM177BA6PVY3 158 aa12.06□□□□□ -0.48
CIT-216ENST00000544872 FZD9O00144 591 aa12.06□□□□□ -0.48
CIT-216ENST00000544872 TCERG1O14776 1098 aaKnown RBP12.06□□□□□ -0.48
CIT-216ENST00000544872 FLIIQ13045 1269 aa12.06□□□□□ -0.48
CIT-216ENST00000544872 PROSER3Q2NL68 480 aa12.06□□□□□ -0.48
CIT-216ENST00000544872 SMC4Q9NTJ3 1288 aa12.06□□□□□ -0.48
CIT-216ENST00000544872 MYH14Q7Z406 1995 aaKnown RBP12.05□□□□□ -0.48
CIT-216ENST00000544872 FAM155AB1AL88 458 aaPredicted RBP12.05□□□□□ -0.48
CIT-216ENST00000544872 GPTP24298 496 aa12.05□□□□□ -0.48
CIT-216ENST00000544872 PLA2G5P39877 138 aa12.05□□□□□ -0.48
CIT-216ENST00000544872 IARSP41252 1262 aaKnown RBP12.05□□□□□ -0.48
CIT-216ENST00000544872 HLFQ16534 295 aa12.05□□□□□ -0.48
CIT-216ENST00000544872 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.05□□□□□ -0.48
CIT-216ENST00000544872 TRMT2AQ8IZ69 625 aaKnown RBP12.05□□□□□ -0.48
CIT-216ENST00000544872 YTHDC1Q96MU7 727 aaKnown RBP12.05□□□□□ -0.48
CIT-216ENST00000544872 CSRNP1Q96S65 589 aa12.05□□□□□ -0.48
CIT-216ENST00000544872 BRIP1Q9BX63 1249 aa12.05□□□□□ -0.48
CIT-216ENST00000544872 PHAXQ9H814 394 aaKnown RBP12.05□□□□□ -0.48
CIT-216ENST00000544872 TRMT112Q9UI30 125 aaKnown RBP12.05□□□□□ -0.48
CIT-216ENST00000544872 PI4KAP2A4QPH2 592 aa12.04□□□□□ -0.48
CIT-216ENST00000544872 TBC1D8O95759 1140 aa12.04□□□□□ -0.48
CIT-216ENST00000544872 SCNN1DP51172 638 aa12.04□□□□□ -0.48
CIT-216ENST00000544872 PI4KAP1Q8N8J0 262 aa12.04□□□□□ -0.48
CIT-216ENST00000544872 NLRP3Q96P20 1036 aa12.04□□□□□ -0.48
CIT-216ENST00000544872 BCL2L12Q9HB09 334 aa12.04□□□□□ -0.48
CIT-216ENST00000544872 HDAC5Q9UQL6 1122 aa12.04□□□□□ -0.48
CIT-216ENST00000544872 MAP3K2Q9Y2U5 619 aa12.04□□□□□ -0.48
CIT-216ENST00000544872 PTPRCP08575 1304 aa12.04□□□□□ -0.48
CIT-216ENST00000544872 COL5A3P25940 1745 aaPredicted RBP12.03□□□□□ -0.48
CIT-216ENST00000544872 TRIM28Q13263 835 aaKnown RBP12.03□□□□□ -0.48
CIT-216ENST00000544872 STYK1Q6J9G0 422 aa12.03□□□□□ -0.48
CIT-216ENST00000544872 ZNF34Q8IZ26 560 aa12.03□□□□□ -0.48
CIT-216ENST00000544872 CCDC191Q8NCU4 936 aa12.03□□□□□ -0.48
CIT-216ENST00000544872 MYD88Q99836 296 aa12.03□□□□□ -0.48
CIT-216ENST00000544872 METTL22Q9BUU2 404 aaPredicted RBP12.03□□□□□ -0.48
CIT-216ENST00000544872 ADARB2Q9NS39 739 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms