RNA–Protein interactions for RNA: ENST00000544613.5

CCDC189-208, Transcript of coiled-coil domain containing 189, humanhuman

TSL 3

Gene CCDC189, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-208ENST00000544613 NLRP10Q86W26 655 aa14.59□□□□□ -0.07
CCDC189-208ENST00000544613 JARID2Q92833 1246 aaPredicted RBP14.59□□□□□ -0.07
CCDC189-208ENST00000544613 TTC14Q96N46 770 aa14.59□□□□□ -0.07
CCDC189-208ENST00000544613 IL25Q9H293 177 aa14.59□□□□□ -0.07
CCDC189-208ENST00000544613 ALDH8A1Q9H2A2 487 aaPredicted RBP14.59□□□□□ -0.07
CCDC189-208ENST00000544613 ZSWIM6Q9HCJ5 1215 aa14.59□□□□□ -0.07
CCDC189-208ENST00000544613 SH2B1Q9NRF2 756 aaPredicted RBP14.59□□□□□ -0.07
CCDC189-208ENST00000544613 LIMCH1Q9UPQ0 1083 aa14.59□□□□□ -0.07
CCDC189-208ENST00000544613 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.59□□□□□ -0.07
CCDC189-208ENST00000544613 PALLDQ8WX93 1383 aa14.59□□□□□ -0.07
CCDC189-208ENST00000544613 ZNF609O15014 1411 aa14.58□□□□□ -0.07
CCDC189-208ENST00000544613 ADAMTS2O95450 1211 aa14.58□□□□□ -0.08
CCDC189-208ENST00000544613 ANKRD1Q15327 319 aa14.58□□□□□ -0.08
CCDC189-208ENST00000544613 KBTBD3Q8NAB2 608 aa14.58□□□□□ -0.08
CCDC189-208ENST00000544613 DBNDD2Q9BQY9 259 aa14.58□□□□□ -0.08
CCDC189-208ENST00000544613 HELLSQ9NRZ9 838 aa14.58□□□□□ -0.08
CCDC189-208ENST00000544613 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.58□□□□□ -0.08
CCDC189-208ENST00000544613 CYP46A1Q9Y6A2 500 aa14.58□□□□□ -0.08
CCDC189-208ENST00000544613 BAG4O95429 457 aaKnown RBP14.57□□□□□ -0.08
CCDC189-208ENST00000544613 KCNJ4P48050 445 aa14.57□□□□□ -0.08
CCDC189-208ENST00000544613 EIF5P55010 431 aaKnown RBP14.57□□□□□ -0.08
CCDC189-208ENST00000544613 PARP10Q53GL7 1025 aa14.57□□□□□ -0.08
CCDC189-208ENST00000544613 TAF7LQ5H9L4 462 aa14.57□□□□□ -0.08
CCDC189-208ENST00000544613 USPL1Q5W0Q7 1092 aa14.57□□□□□ -0.08
CCDC189-208ENST00000544613 DZIP3Q86Y13 1208 aaKnown RBP14.57□□□□□ -0.08
CCDC189-208ENST00000544613 SYTL4Q96C24 671 aaPredicted RBP14.57□□□□□ -0.08
CCDC189-208ENST00000544613 SLC4A9Q96Q91 983 aa14.57□□□□□ -0.08
CCDC189-208ENST00000544613 FOXD4L1Q9NU39 408 aa14.57□□□□□ -0.08
CCDC189-208ENST00000544613 CCDC87Q9NVE4 849 aa14.57□□□□□ -0.08
CCDC189-208ENST00000544613 RBM8AQ9Y5S9 174 aaKnown RBP14.57□□□□□ -0.08
CCDC189-208ENST00000544613 U3KPZ7 1027 aaPredicted RBP14.57□□□□□ -0.08
CCDC189-208ENST00000544613 SH3TC1Q8TE82 1336 aa14.57□□□□□ -0.08
CCDC189-208ENST00000544613 SPEF2Q9C093 1822 aa14.57□□□□□ -0.08
CCDC189-208ENST00000544613 ANKRD18BA2A2Z9 1011 aa14.56□□□□□ -0.08
CCDC189-208ENST00000544613 PDE8AO60658 829 aa14.56□□□□□ -0.08
CCDC189-208ENST00000544613 SSFA2P28290 1259 aa14.56□□□□□ -0.08
CCDC189-208ENST00000544613 PTH1RQ03431 593 aa14.56□□□□□ -0.08
CCDC189-208ENST00000544613 VPS72Q15906 364 aa14.56□□□□□ -0.08
CCDC189-208ENST00000544613 MCMDC2Q4G0Z9 681 aa14.56□□□□□ -0.08
CCDC189-208ENST00000544613 CCDC158Q5M9N0 1113 aa14.56□□□□□ -0.08
CCDC189-208ENST00000544613 CREB3L3Q68CJ9 461 aa14.56□□□□□ -0.08
CCDC189-208ENST00000544613 ZNF34Q8IZ26 560 aa14.56□□□□□ -0.08
CCDC189-208ENST00000544613 ZBTB1Q9Y2K1 713 aa14.56□□□□□ -0.08
CCDC189-208ENST00000544613 ZNF330Q9Y3S2 320 aaPredicted RBP14.56□□□□□ -0.08
CCDC189-208ENST00000544613 ZFYP08048 801 aaPredicted RBP14.55□□□□□ -0.08
CCDC189-208ENST00000544613 CTSWP56202 376 aa14.55□□□□□ -0.08
CCDC189-208ENST00000544613 PRPF40BQ6NWY9 871 aaKnown RBP14.55□□□□□ -0.08
CCDC189-208ENST00000544613 RUFY3Q7L099 469 aa14.55□□□□□ -0.08
CCDC189-208ENST00000544613 RASEFQ8IZ41 740 aa14.55□□□□□ -0.08
CCDC189-208ENST00000544613 MARCH10Q8NA82 808 aaPredicted RBP14.55□□□□□ -0.08
CCDC189-208ENST00000544613 ZNF512BQ96KM6 892 aaPredicted RBP14.55□□□□□ -0.08
CCDC189-208ENST00000544613 FAM227BQ96M60 508 aa14.55□□□□□ -0.08
CCDC189-208ENST00000544613 NEUROD6Q96NK8 337 aa14.55□□□□□ -0.08
CCDC189-208ENST00000544613 UPF3BQ9BZI7 483 aaKnown RBP14.55□□□□□ -0.08
CCDC189-208ENST00000544613 PDRG1Q9NUG6 133 aa14.55□□□□□ -0.08
CCDC189-208ENST00000544613 PAG1Q9NWQ8 432 aa14.55□□□□□ -0.08
CCDC189-208ENST00000544613 RPAP1Q9BWH6 1393 aaPredicted RBP14.55□□□□□ -0.08
CCDC189-208ENST00000544613 ZNF831Q5JPB2 1677 aa14.55□□□□□ -0.08
CCDC189-208ENST00000544613 DOT1LQ8TEK3 1739 aa14.55□□□□□ -0.08
CCDC189-208ENST00000544613 LOC102724428A0A0B4J2F2 783 aa14.54□□□□□ -0.08
CCDC189-208ENST00000544613 A0A0D9SFI3 127 aa14.54□□□□□ -0.08
CCDC189-208ENST00000544613 A0A1B0GUL7 405 aa14.54□□□□□ -0.08
CCDC189-208ENST00000544613 SLC27A2O14975 620 aa14.54□□□□□ -0.08
CCDC189-208ENST00000544613 TAF5LO75529 589 aa14.54□□□□□ -0.08
CCDC189-208ENST00000544613 IFIT1P09914 478 aaKnown RBP14.54□□□□□ -0.08
CCDC189-208ENST00000544613 CASTP20810 708 aaKnown RBP14.54□□□□□ -0.08
CCDC189-208ENST00000544613 SIK1P57059 783 aa14.54□□□□□ -0.08
CCDC189-208ENST00000544613 ZGPATQ8N5A5 531 aaKnown RBP14.54□□□□□ -0.08
CCDC189-208ENST00000544613 TTLL11Q8NHH1 800 aa14.54□□□□□ -0.08
CCDC189-208ENST00000544613 FAM89AQ96GI7 184 aa14.54□□□□□ -0.08
CCDC189-208ENST00000544613 JAKMIP1Q96N16 626 aaKnown RBP14.54□□□□□ -0.08
CCDC189-208ENST00000544613 WDR33Q9C0J8 1336 aaKnown RBP14.54□□□□□ -0.08
CCDC189-208ENST00000544613 RREB1Q92766 1687 aa14.54□□□□□ -0.08
CCDC189-208ENST00000544613 SPATA31A6Q5VVP1 1343 aa14.53□□□□□ -0.08
CCDC189-208ENST00000544613 IRS4O14654 1257 aaPredicted RBP14.53□□□□□ -0.08
CCDC189-208ENST00000544613 BRD1O95696 1058 aa14.53□□□□□ -0.08
CCDC189-208ENST00000544613 HMGB1P09429 215 aaKnown RBP14.53□□□□□ -0.08
CCDC189-208ENST00000544613 ATP6V1AP38606 617 aa14.53□□□□□ -0.08
CCDC189-208ENST00000544613 AK2P54819 239 aa14.53□□□□□ -0.08
CCDC189-208ENST00000544613 HLFQ16534 295 aa14.53□□□□□ -0.08
CCDC189-208ENST00000544613 KLHL40Q2TBA0 621 aa14.53□□□□□ -0.08
CCDC189-208ENST00000544613 LRRC24Q50LG9 513 aa14.53□□□□□ -0.08
CCDC189-208ENST00000544613 INTS5Q6P9B9 1019 aaKnown RBP14.53□□□□□ -0.08
CCDC189-208ENST00000544613 CHMP4CQ96CF2 233 aa14.53□□□□□ -0.08
CCDC189-208ENST00000544613 ARXQ96QS3 562 aa14.53□□□□□ -0.08
CCDC189-208ENST00000544613 DSCC1Q9BVC3 393 aa14.53□□□□□ -0.08
CCDC189-208ENST00000544613 TRMT112Q9UI30 125 aaKnown RBP14.53□□□□□ -0.08
CCDC189-208ENST00000544613 ZNF652Q9Y2D9 606 aa14.53□□□□□ -0.08
CCDC189-208ENST00000544613 CCDC9Q9Y3X0 531 aaKnown RBP14.53□□□□□ -0.08
CCDC189-208ENST00000544613 RTL9Q8NET4 1388 aa14.52□□□□□ -0.08
CCDC189-208ENST00000544613 NUTM2BA6NNL0 878 aaPredicted RBP14.52□□□□□ -0.09
CCDC189-208ENST00000544613 NUTM2EB1AL46 878 aaPredicted RBP14.52□□□□□ -0.09
CCDC189-208ENST00000544613 GORABQ5T7V8 394 aa14.52□□□□□ -0.09
CCDC189-208ENST00000544613 BLOC1S2Q6QNY1 142 aa14.52□□□□□ -0.09
CCDC189-208ENST00000544613 CLEC4GQ6UXB4 293 aa14.52□□□□□ -0.09
CCDC189-208ENST00000544613 NUTM2AQ8IVF1 878 aaPredicted RBP14.52□□□□□ -0.09
CCDC189-208ENST00000544613 FNBP4Q8N3X1 1017 aaPredicted RBP14.52□□□□□ -0.09
CCDC189-208ENST00000544613 DNAJC2Q99543 621 aaKnown RBP14.52□□□□□ -0.09
CCDC189-208ENST00000544613 RIPOR2Q9Y4F9 1068 aa14.52□□□□□ -0.09
CCDC189-208ENST00000544613 ANKRD36CQ5JPF3 1778 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms