RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 NEFLP07196 543 aa4.24□□□□□ -1.73
YBX3-214ENST00000544501 RARAP10276 462 aa4.24□□□□□ -1.73
YBX3-214ENST00000544501 HOXD8P13378 290 aaPredicted RBP4.24□□□□□ -1.73
YBX3-214ENST00000544501 NFKB1P19838 968 aa4.24□□□□□ -1.73
YBX3-214ENST00000544501 TARSP26639 723 aaKnown RBP4.24□□□□□ -1.73
YBX3-214ENST00000544501 SLCO4C1Q6ZQN7 724 aa4.24□□□□□ -1.73
YBX3-214ENST00000544501 ZNF438Q7Z4V0 828 aa4.24□□□□□ -1.73
YBX3-214ENST00000544501 BHMTQ93088 406 aa4.24□□□□□ -1.73
YBX3-214ENST00000544501 ACDQ96AP0 544 aa4.24□□□□□ -1.73
YBX3-214ENST00000544501 DMRTB1Q96MA1 342 aa4.24□□□□□ -1.73
YBX3-214ENST00000544501 FAM129BQ96TA1 746 aa4.24□□□□□ -1.73
YBX3-214ENST00000544501 GGNBP2Q9H3C7 697 aa4.24□□□□□ -1.73
YBX3-214ENST00000544501 KLF15Q9UIH9 416 aa4.24□□□□□ -1.73
YBX3-214ENST00000544501 NEURL1BA8MQ27 555 aa4.23□□□□□ -1.73
YBX3-214ENST00000544501 OIP5O43482 229 aa4.23□□□□□ -1.73
YBX3-214ENST00000544501 BCRP11274 1271 aa4.23□□□□□ -1.73
YBX3-214ENST00000544501 SOX18P35713 384 aa4.23□□□□□ -1.73
YBX3-214ENST00000544501 MARSP56192 900 aaKnown RBP4.23□□□□□ -1.73
YBX3-214ENST00000544501 PCBP4P57723 403 aaKnown RBP4.23□□□□□ -1.73
YBX3-214ENST00000544501 INSM1Q01101 510 aaPredicted RBP4.23□□□□□ -1.73
YBX3-214ENST00000544501 C8orf34Q49A92 452 aa4.23□□□□□ -1.73
YBX3-214ENST00000544501 TTC39BQ5VTQ0 682 aaPredicted RBP4.23□□□□□ -1.73
YBX3-214ENST00000544501 ZSCAN29Q8IWY8 852 aaPredicted RBP4.23□□□□□ -1.73
YBX3-214ENST00000544501 TRPM4Q8TD43 1214 aa4.23□□□□□ -1.73
YBX3-214ENST00000544501 PMEPA1Q969W9 287 aa4.23□□□□□ -1.73
YBX3-214ENST00000544501 ALKBH8Q96BT7 664 aaKnown RBP4.23□□□□□ -1.73
YBX3-214ENST00000544501 MDFIQ99750 246 aa4.23□□□□□ -1.73
YBX3-214ENST00000544501 ELP3Q9H9T3 547 aa4.23□□□□□ -1.73
YBX3-214ENST00000544501 ABI2Q9NYB9 513 aaPredicted RBP4.23□□□□□ -1.73
YBX3-214ENST00000544501 TLR7Q9NYK1 1049 aaKnown RBP4.23□□□□□ -1.73
YBX3-214ENST00000544501 ZFATQ9P243 1243 aa4.23□□□□□ -1.73
YBX3-214ENST00000544501 GGA1Q9UJY5 639 aa4.23□□□□□ -1.73
YBX3-214ENST00000544501 ELOA3CA0A087WX78 387 aaPredicted RBP4.22□□□□□ -1.73
YBX3-214ENST00000544501 ELOA3DA6NLF2 546 aaPredicted RBP4.22□□□□□ -1.73
YBX3-214ENST00000544501 TNFRSF21O75509 655 aa4.22□□□□□ -1.73
YBX3-214ENST00000544501 IGHA2P01877 340 aa4.22□□□□□ -1.73
YBX3-214ENST00000544501 PSAPP07602 524 aa4.22□□□□□ -1.73
YBX3-214ENST00000544501 CELA2BP08218 269 aaPredicted RBP4.22□□□□□ -1.73
YBX3-214ENST00000544501 EPXP11678 715 aa4.22□□□□□ -1.73
YBX3-214ENST00000544501 ALAS2P22557 587 aa4.22□□□□□ -1.73
YBX3-214ENST00000544501 MAPK1P28482 360 aa4.22□□□□□ -1.73
YBX3-214ENST00000544501 NRLP54845 237 aa4.22□□□□□ -1.73
YBX3-214ENST00000544501 PLAURQ03405 335 aa4.22□□□□□ -1.73
YBX3-214ENST00000544501 TRIM26Q12899 539 aaPredicted RBP4.22□□□□□ -1.73
YBX3-214ENST00000544501 ELOA3BQ3SY89 546 aa4.22□□□□□ -1.73
YBX3-214ENST00000544501 DHX32Q7L7V1 743 aaKnown RBP4.22□□□□□ -1.73
YBX3-214ENST00000544501 KRT25Q7Z3Z0 450 aa4.22□□□□□ -1.73
YBX3-214ENST00000544501 RAB44Q7Z6P3 723 aaPredicted RBP4.22□□□□□ -1.73
YBX3-214ENST00000544501 FCHSD1Q86WN1 690 aa4.22□□□□□ -1.73
YBX3-214ENST00000544501 ELOA3Q8NG57 546 aa4.22□□□□□ -1.73
YBX3-214ENST00000544501 OR13H1Q8NG92 308 aa4.22□□□□□ -1.73
YBX3-214ENST00000544501 ASB16Q96NS5 453 aa4.22□□□□□ -1.73
YBX3-214ENST00000544501 ENAMQ9NRM1 1142 aa4.22□□□□□ -1.73
YBX3-214ENST00000544501 TMEM63CQ9P1W3 806 aa4.22□□□□□ -1.73
YBX3-214ENST00000544501 MMP20O60882 483 aa4.21□□□□□ -1.74
YBX3-214ENST00000544501 ERCC3P19447 782 aa4.21□□□□□ -1.74
YBX3-214ENST00000544501 ADH7P40394 386 aa4.21□□□□□ -1.74
YBX3-214ENST00000544501 GPLD1P80108 840 aa4.21□□□□□ -1.74
YBX3-214ENST00000544501 MAP3K10Q02779 954 aa4.21□□□□□ -1.74
YBX3-214ENST00000544501 CCDC27Q2M243 656 aa4.21□□□□□ -1.74
YBX3-214ENST00000544501 ZNF385CQ66K41 422 aaPredicted RBP4.21□□□□□ -1.74
YBX3-214ENST00000544501 LYPD4Q6UWN0 246 aa4.21□□□□□ -1.74
YBX3-214ENST00000544501 TMC7Q7Z402 723 aa4.21□□□□□ -1.74
YBX3-214ENST00000544501 ZSCAN1Q8NBB4 408 aa4.21□□□□□ -1.74
YBX3-214ENST00000544501 GALNT6Q8NCL4 622 aa4.21□□□□□ -1.74
YBX3-214ENST00000544501 TMC1Q8TDI8 760 aa4.21□□□□□ -1.74
YBX3-214ENST00000544501 SNX29Q8TEQ0 813 aa4.21□□□□□ -1.74
YBX3-214ENST00000544501 EDARADDQ8WWZ3 215 aa4.21□□□□□ -1.74
YBX3-214ENST00000544501 UBE2OQ9C0C9 1292 aaKnown RBP4.21□□□□□ -1.74
YBX3-214ENST00000544501 A6NHS1 94 aa4.2□□□□□ -1.74
YBX3-214ENST00000544501 TREHO43280 583 aa4.2□□□□□ -1.74
YBX3-214ENST00000544501 LORP23490 312 aaPredicted RBP4.2□□□□□ -1.74
YBX3-214ENST00000544501 PLCB3Q01970 1234 aa4.2□□□□□ -1.74
YBX3-214ENST00000544501 DSC3Q14574 896 aa4.2□□□□□ -1.74
YBX3-214ENST00000544501 COL19A1Q14993 1142 aa4.2□□□□□ -1.74
YBX3-214ENST00000544501 TMCO4Q5TGY1 634 aa4.2□□□□□ -1.74
YBX3-214ENST00000544501 KANK3Q6NY19 840 aa4.2□□□□□ -1.74
YBX3-214ENST00000544501 C1orf229Q6ZS94 237 aaPredicted RBP4.2□□□□□ -1.74
YBX3-214ENST00000544501 SVOPQ8N4V2 548 aa4.2□□□□□ -1.74
YBX3-214ENST00000544501 DNAJC25Q9H1X3 360 aa4.2□□□□□ -1.74
YBX3-214ENST00000544501 DNAJB12Q9NXW2 375 aaKnown RBP4.2□□□□□ -1.74
YBX3-214ENST00000544501 SLC6A14Q9UN76 642 aa4.2□□□□□ -1.74
YBX3-214ENST00000544501 LOC102724428A0A0B4J2F2 783 aa4.19□□□□□ -1.74
YBX3-214ENST00000544501 PHF20L1A8MW92 1017 aa4.19□□□□□ -1.74
YBX3-214ENST00000544501 ZBTB42B2RXF5 422 aa4.19□□□□□ -1.74
YBX3-214ENST00000544501 GPR182O15218 404 aa4.19□□□□□ -1.74
YBX3-214ENST00000544501 PHACTR2O75167 634 aa4.19□□□□□ -1.74
YBX3-214ENST00000544501 ARHGEF15O94989 841 aa4.19□□□□□ -1.74
YBX3-214ENST00000544501 KIF4AO95239 1232 aa4.19□□□□□ -1.74
YBX3-214ENST00000544501 CES1P23141 567 aa4.19□□□□□ -1.74
YBX3-214ENST00000544501 SIK1P57059 783 aa4.19□□□□□ -1.74
YBX3-214ENST00000544501 HYAL2Q12891 473 aa4.19□□□□□ -1.74
YBX3-214ENST00000544501 DNAJC14Q6Y2X3 702 aaPredicted RBP4.19□□□□□ -1.74
YBX3-214ENST00000544501 C1orf127Q8N9H9 656 aa4.19□□□□□ -1.74
YBX3-214ENST00000544501 WHAMMQ8TF30 809 aa4.19□□□□□ -1.74
YBX3-214ENST00000544501 BTBD6Q96KE9 485 aa4.19□□□□□ -1.74
YBX3-214ENST00000544501 RBSNQ9H1K0 784 aa4.19□□□□□ -1.74
YBX3-214ENST00000544501 CHRDQ9H2X0 955 aa4.19□□□□□ -1.74
YBX3-214ENST00000544501 IGFLR1Q9H665 355 aa4.19□□□□□ -1.74
YBX3-214ENST00000544501 ZFYVE28Q9HCC9 887 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms