RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 NUP188Q5SRE5 1749 aa18.06■□□□□ 0.48
CHFR-223ENST00000544268 FAM182BQ5T319 152 aa18.05■□□□□ 0.48
CHFR-223ENST00000544268 KAZALD1Q96I82 304 aa18.05■□□□□ 0.48
CHFR-223ENST00000544268 SUCLG2Q96I99 432 aa18.05■□□□□ 0.48
CHFR-223ENST00000544268 TRPC5Q9UL62 973 aaPredicted RBP18.05■□□□□ 0.48
CHFR-223ENST00000544268 AFDNP55196 1824 aaKnown RBP18.05■□□□□ 0.48
CHFR-223ENST00000544268 CPA1P15085 419 aa18.04■□□□□ 0.48
CHFR-223ENST00000544268 GPT2Q8TD30 523 aa18.04■□□□□ 0.48
CHFR-223ENST00000544268 NUCB2P80303 420 aa18.04■□□□□ 0.48
CHFR-223ENST00000544268 CSPP1Q1MSJ5 1256 aa18.04■□□□□ 0.48
CHFR-223ENST00000544268 ZBTB1Q9Y2K1 713 aa18.04■□□□□ 0.48
CHFR-223ENST00000544268 PALLDQ8WX93 1383 aa18.04■□□□□ 0.48
CHFR-223ENST00000544268 LOC102724428A0A0B4J2F2 783 aa18.03■□□□□ 0.48
CHFR-223ENST00000544268 GOLGA6L22H0YM25 854 aa18.03■□□□□ 0.48
CHFR-223ENST00000544268 SIK1P57059 783 aa18.03■□□□□ 0.48
CHFR-223ENST00000544268 KLHL40Q2TBA0 621 aa18.03■□□□□ 0.48
CHFR-223ENST00000544268 CWC27Q6UX04 472 aaKnown RBP18.03■□□□□ 0.48
CHFR-223ENST00000544268 PTF1AQ7RTS3 328 aa18.03■□□□□ 0.48
CHFR-223ENST00000544268 JARID2Q92833 1246 aaPredicted RBP18.03■□□□□ 0.48
CHFR-223ENST00000544268 ATP6V1AP38606 617 aa18.03■□□□□ 0.48
CHFR-223ENST00000544268 DMTNQ08495 405 aa18.03■□□□□ 0.48
CHFR-223ENST00000544268 OS9Q13438 667 aaPredicted RBP18.02■□□□□ 0.48
CHFR-223ENST00000544268 RASEFQ8IZ41 740 aa18.02■□□□□ 0.48
CHFR-223ENST00000544268 BICC1Q9H694 974 aaKnown RBP18.02■□□□□ 0.48
CHFR-223ENST00000544268 MTX1Q13505 466 aa18.02■□□□□ 0.47
CHFR-223ENST00000544268 KLHDC4Q8TBB5 520 aa18.02■□□□□ 0.47
CHFR-223ENST00000544268 QTRT2Q9H974 415 aaKnown RBP18.02■□□□□ 0.47
CHFR-223ENST00000544268 HDAC5Q9UQL6 1122 aa18.02■□□□□ 0.47
CHFR-223ENST00000544268 A0A087WZG4 1122 aa18.01■□□□□ 0.47
CHFR-223ENST00000544268 ONECUT3O60422 494 aaPredicted RBP18.01■□□□□ 0.47
CHFR-223ENST00000544268 BRD2P25440 801 aaKnown RBP18.01■□□□□ 0.47
CHFR-223ENST00000544268 ITPK1Q13572 414 aa18.01■□□□□ 0.47
CHFR-223ENST00000544268 TPRNQ4KMQ1 711 aa18.01■□□□□ 0.47
CHFR-223ENST00000544268 UBE3BQ7Z3V4 1068 aa18.01■□□□□ 0.47
CHFR-223ENST00000544268 KIF1BPQ96EK5 621 aa18.01■□□□□ 0.47
CHFR-223ENST00000544268 GDPD2Q9HCC8 539 aa18.01■□□□□ 0.47
CHFR-223ENST00000544268 CWC22Q9HCG8 908 aaKnown RBP18.01■□□□□ 0.47
CHFR-223ENST00000544268 EP400Q96L91 3159 aa18.01■□□□□ 0.47
CHFR-223ENST00000544268 MCM5P33992 734 aa18■□□□□ 0.47
CHFR-223ENST00000544268 COL9A3Q14050 684 aaPredicted RBP18■□□□□ 0.47
CHFR-223ENST00000544268 ZSCAN23Q3MJ62 389 aa18■□□□□ 0.47
CHFR-223ENST00000544268 KIF6Q6ZMV9 814 aa18■□□□□ 0.47
CHFR-223ENST00000544268 DHX37Q8IY37 1157 aaKnown RBP18■□□□□ 0.47
CHFR-223ENST00000544268 SMARCC1Q92922 1105 aaPredicted RBP18■□□□□ 0.47
CHFR-223ENST00000544268 ZNF445P59923 1031 aa18■□□□□ 0.47
CHFR-223ENST00000544268 EPHA10Q5JZY3 1008 aa18■□□□□ 0.47
CHFR-223ENST00000544268 SEPT12Q8IYM1 358 aa18■□□□□ 0.47
CHFR-223ENST00000544268 PDLIM2Q96JY6 352 aa18■□□□□ 0.47
CHFR-223ENST00000544268 CCDC94Q9BW85 323 aaPredicted RBP18■□□□□ 0.47
CHFR-223ENST00000544268 EIF2AK3Q9NZJ5 1116 aaKnown RBP18■□□□□ 0.47
CHFR-223ENST00000544268 ZHX1Q9UKY1 873 aaPredicted RBP18■□□□□ 0.47
CHFR-223ENST00000544268 RAB11FIP3O75154 756 aa17.99■□□□□ 0.47
CHFR-223ENST00000544268 INTS5Q6P9B9 1019 aaKnown RBP17.99■□□□□ 0.47
CHFR-223ENST00000544268 SIL1Q9H173 461 aa17.99■□□□□ 0.47
CHFR-223ENST00000544268 CWC25Q9NXE8 425 aaPredicted RBP17.99■□□□□ 0.47
CHFR-223ENST00000544268 SGSM2O43147 1006 aa17.98■□□□□ 0.47
CHFR-223ENST00000544268 MCCP23508 829 aa17.98■□□□□ 0.47
CHFR-223ENST00000544268 HSPA4P34932 840 aa17.98■□□□□ 0.47
CHFR-223ENST00000544268 CRKLP46109 303 aaKnown RBP17.98■□□□□ 0.47
CHFR-223ENST00000544268 CASP7P55210 303 aa17.98■□□□□ 0.47
CHFR-223ENST00000544268 SASS6Q6UVJ0 657 aa17.98■□□□□ 0.47
CHFR-223ENST00000544268 MAP3K15Q6ZN16 1313 aa17.98■□□□□ 0.47
CHFR-223ENST00000544268 IL6STP40189 918 aaPredicted RBP17.98■□□□□ 0.47
CHFR-223ENST00000544268 TCIRG1Q13488 830 aa17.98■□□□□ 0.47
CHFR-223ENST00000544268 LSG1Q9H089 658 aaKnown RBP17.98■□□□□ 0.47
CHFR-223ENST00000544268 TLR7Q9NYK1 1049 aaKnown RBP17.98■□□□□ 0.47
CHFR-223ENST00000544268 PTH1RQ03431 593 aa17.97■□□□□ 0.47
CHFR-223ENST00000544268 CCDC191Q8NCU4 936 aa17.97■□□□□ 0.47
CHFR-223ENST00000544268 CCDC87Q9NVE4 849 aa17.97■□□□□ 0.47
CHFR-223ENST00000544268 TMEM63CQ9P1W3 806 aa17.97■□□□□ 0.47
CHFR-223ENST00000544268 ZKSCAN5Q9Y2L8 839 aa17.97■□□□□ 0.47
CHFR-223ENST00000544268 SNX14Q9Y5W7 946 aa17.97■□□□□ 0.47
CHFR-223ENST00000544268 CUL4AQ13619 759 aa17.97■□□□□ 0.47
CHFR-223ENST00000544268 HLFQ16534 295 aa17.97■□□□□ 0.47
CHFR-223ENST00000544268 MYH14Q7Z406 1995 aaKnown RBP17.97■□□□□ 0.47
CHFR-223ENST00000544268 ISCA1Q9BUE6 129 aa17.97■□□□□ 0.47
CHFR-223ENST00000544268 PRDM10Q9NQV6 1147 aa17.97■□□□□ 0.47
CHFR-223ENST00000544268 H7C1W4 665 aa17.96■□□□□ 0.47
CHFR-223ENST00000544268 ZSCAN20P17040 1043 aaPredicted RBP17.96■□□□□ 0.47
CHFR-223ENST00000544268 KCNQ4P56696 695 aa17.96■□□□□ 0.47
CHFR-223ENST00000544268 TBC1D2BQ9UPU7 963 aa17.96■□□□□ 0.47
CHFR-223ENST00000544268 CICQ96RK0 1608 aaPredicted RBP17.96■□□□□ 0.47
CHFR-223ENST00000544268 CCDC8Q9H0W5 538 aaPredicted RBP17.96■□□□□ 0.46
CHFR-223ENST00000544268 RBSNQ9H1K0 784 aa17.96■□□□□ 0.46
CHFR-223ENST00000544268 BTAF1O14981 1849 aa17.95■□□□□ 0.46
CHFR-223ENST00000544268 NHSQ6T4R5 1651 aa17.95■□□□□ 0.46
CHFR-223ENST00000544268 AOX1Q06278 1338 aa17.95■□□□□ 0.46
CHFR-223ENST00000544268 RAD50Q92878 1312 aa17.95■□□□□ 0.46
CHFR-223ENST00000544268 BRD1O95696 1058 aa17.95■□□□□ 0.46
CHFR-223ENST00000544268 EIF5P55010 431 aaKnown RBP17.95■□□□□ 0.46
CHFR-223ENST00000544268 GIGYF2Q6Y7W6 1299 aaKnown RBP17.95■□□□□ 0.46
CHFR-223ENST00000544268 SASH1O94885 1247 aa17.94■□□□□ 0.46
CHFR-223ENST00000544268 LARGE1O95461 756 aa17.94■□□□□ 0.46
CHFR-223ENST00000544268 ADCK5Q3MIX3 580 aa17.94■□□□□ 0.46
CHFR-223ENST00000544268 DZIP3Q86Y13 1208 aaKnown RBP17.94■□□□□ 0.46
CHFR-223ENST00000544268 CNTROBQ8N137 903 aa17.94■□□□□ 0.46
CHFR-223ENST00000544268 COL15A1P39059 1388 aa17.94■□□□□ 0.46
CHFR-223ENST00000544268 ANAPC15P60006 121 aa17.94■□□□□ 0.46
CHFR-223ENST00000544268 AACSQ86V21 672 aa17.94■□□□□ 0.46
CHFR-223ENST00000544268 SYCE3A1L190 88 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms