RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 NIP7Q9Y221 180 aaKnown RBP eCLIP16.65■□□□□ 0.26
HCFC2-202ENST00000544223 USP42Q9H9J4 1324 aaKnown RBP16.65■□□□□ 0.26
HCFC2-202ENST00000544223 ADORA1P30542 326 aa16.65■□□□□ 0.26
HCFC2-202ENST00000544223 TAF7LQ5H9L4 462 aa16.65■□□□□ 0.26
HCFC2-202ENST00000544223 DDX46Q7L014 1031 aaKnown RBP16.65■□□□□ 0.26
HCFC2-202ENST00000544223 ZNF34Q8IZ26 560 aa16.65■□□□□ 0.26
HCFC2-202ENST00000544223 BTAF1O14981 1849 aa16.64■□□□□ 0.25
HCFC2-202ENST00000544223 EYA2O00167 538 aa16.64■□□□□ 0.25
HCFC2-202ENST00000544223 PHF14O94880 888 aa16.64■□□□□ 0.25
HCFC2-202ENST00000544223 GPATCH3Q96I76 525 aa16.64■□□□□ 0.25
HCFC2-202ENST00000544223 DTNBO60941 627 aa16.64■□□□□ 0.25
HCFC2-202ENST00000544223 PTH1RQ03431 593 aa16.64■□□□□ 0.25
HCFC2-202ENST00000544223 SEC31BQ9NQW1 1179 aa16.64■□□□□ 0.25
HCFC2-202ENST00000544223 COL15A1P39059 1388 aa16.64■□□□□ 0.25
HCFC2-202ENST00000544223 IFIT5Q13325 482 aaKnown RBP16.63■□□□□ 0.25
HCFC2-202ENST00000544223 LARP6Q9BRS8 491 aaKnown RBP16.63■□□□□ 0.25
HCFC2-202ENST00000544223 UPF3BQ9BZI7 483 aaKnown RBP16.63■□□□□ 0.25
HCFC2-202ENST00000544223 SNRKQ9NRH2 765 aa16.63■□□□□ 0.25
HCFC2-202ENST00000544223 DIAPH3Q9NSV4 1193 aa16.63■□□□□ 0.25
HCFC2-202ENST00000544223 SRCAPQ6ZRS2 3230 aa16.63■□□□□ 0.25
HCFC2-202ENST00000544223 FRAT2O75474 233 aaPredicted RBP16.63■□□□□ 0.25
HCFC2-202ENST00000544223 CTSWP56202 376 aa16.63■□□□□ 0.25
HCFC2-202ENST00000544223 FSD1Q9BTV5 496 aa16.63■□□□□ 0.25
HCFC2-202ENST00000544223 ANTXR1Q9H6X2 564 aa16.63■□□□□ 0.25
HCFC2-202ENST00000544223 CCNL1Q9UK58 526 aaPredicted RBP16.63■□□□□ 0.25
HCFC2-202ENST00000544223 A0A0D9SFI3 127 aa16.62■□□□□ 0.25
HCFC2-202ENST00000544223 A0A1B0GUL7 405 aa16.62■□□□□ 0.25
HCFC2-202ENST00000544223 GNPATO15228 680 aa16.62■□□□□ 0.25
HCFC2-202ENST00000544223 NMIQ13287 307 aaPredicted RBP16.62■□□□□ 0.25
HCFC2-202ENST00000544223 COL9A3Q14050 684 aaPredicted RBP16.62■□□□□ 0.25
HCFC2-202ENST00000544223 PI16Q6UXB8 463 aa16.62■□□□□ 0.25
HCFC2-202ENST00000544223 SMARCC1Q92922 1105 aaPredicted RBP16.62■□□□□ 0.25
HCFC2-202ENST00000544223 SEC62Q99442 399 aaKnown RBP16.62■□□□□ 0.25
HCFC2-202ENST00000544223 ANKRD36CQ5JPF3 1778 aa16.62■□□□□ 0.25
HCFC2-202ENST00000544223 ERVV-1B6SEH8 477 aa16.62■□□□□ 0.25
HCFC2-202ENST00000544223 SGSM2O43147 1006 aa16.62■□□□□ 0.25
HCFC2-202ENST00000544223 CSF1RP07333 972 aa16.62■□□□□ 0.25
HCFC2-202ENST00000544223 CPA1P15085 419 aa16.62■□□□□ 0.25
HCFC2-202ENST00000544223 C3orf67Q6ZVT6 689 aa16.62■□□□□ 0.25
HCFC2-202ENST00000544223 LDHAL6AQ6ZMR3 332 aa16.61■□□□□ 0.25
HCFC2-202ENST00000544223 THSD7AQ9UPZ6 1657 aa16.61■□□□□ 0.25
HCFC2-202ENST00000544223 TAF1P21675 1872 aa16.61■□□□□ 0.25
HCFC2-202ENST00000544223 WTIPA6NIX2 430 aaPredicted RBP16.61■□□□□ 0.25
HCFC2-202ENST00000544223 NFKBIBQ15653 356 aa16.61■□□□□ 0.25
HCFC2-202ENST00000544223 HSP90AB3PQ58FF7 597 aa16.61■□□□□ 0.25
HCFC2-202ENST00000544223 CCDC129Q6ZRS4 1044 aa16.61■□□□□ 0.25
HCFC2-202ENST00000544223 TRPC5Q9UL62 973 aaPredicted RBP16.61■□□□□ 0.25
HCFC2-202ENST00000544223 IL15P40933 162 aaPredicted RBP16.6■□□□□ 0.25
HCFC2-202ENST00000544223 USPL1Q5W0Q7 1092 aa16.6■□□□□ 0.25
HCFC2-202ENST00000544223 RASEFQ8IZ41 740 aa16.6■□□□□ 0.25
HCFC2-202ENST00000544223 LRRC4BQ9NT99 713 aa16.6■□□□□ 0.25
HCFC2-202ENST00000544223 COL4A1P02462 1669 aa16.6■□□□□ 0.25
HCFC2-202ENST00000544223 GOLIM4O00461 696 aa16.6■□□□□ 0.25
HCFC2-202ENST00000544223 ZNF589Q86UQ0 364 aaPredicted RBP16.6■□□□□ 0.25
HCFC2-202ENST00000544223 EVI5LQ96CN4 794 aa16.6■□□□□ 0.25
HCFC2-202ENST00000544223 COL5A3P25940 1745 aaPredicted RBP16.59■□□□□ 0.25
HCFC2-202ENST00000544223 TAF5LO75529 589 aa16.59■□□□□ 0.25
HCFC2-202ENST00000544223 NEK4P51957 841 aa16.59■□□□□ 0.25
HCFC2-202ENST00000544223 SCARF1Q14162 830 aa16.59■□□□□ 0.25
HCFC2-202ENST00000544223 TBC1D9BQ66K14 1250 aa16.59■□□□□ 0.25
HCFC2-202ENST00000544223 LSG1Q9H089 658 aaKnown RBP16.59■□□□□ 0.25
HCFC2-202ENST00000544223 CNNM1Q9NRU3 951 aa16.59■□□□□ 0.25
HCFC2-202ENST00000544223 TRIM37O94972 964 aa16.59■□□□□ 0.25
HCFC2-202ENST00000544223 SLC51AQ86UW1 340 aa16.59■□□□□ 0.25
HCFC2-202ENST00000544223 CEP126Q9P2H0 1117 aa16.59■□□□□ 0.25
HCFC2-202ENST00000544223 TAF6LQ9Y6J9 622 aa16.59■□□□□ 0.25
HCFC2-202ENST00000544223 METTL24Q5JXM2 366 aa16.58■□□□□ 0.25
HCFC2-202ENST00000544223 UTP14AQ9BVJ6 771 aaKnown RBP16.58■□□□□ 0.25
HCFC2-202ENST00000544223 BCL2L12Q9HB09 334 aa16.58■□□□□ 0.25
HCFC2-202ENST00000544223 PDE8AO60658 829 aa16.58■□□□□ 0.24
HCFC2-202ENST00000544223 HSP90AA1P07900 732 aaKnown RBP16.58■□□□□ 0.24
HCFC2-202ENST00000544223 ATP5JP18859 108 aa16.58■□□□□ 0.24
HCFC2-202ENST00000544223 FKBP4Q02790 459 aaKnown RBP eCLIP16.58■□□□□ 0.24
HCFC2-202ENST00000544223 ERFEQ4G0M1 354 aa16.58■□□□□ 0.24
HCFC2-202ENST00000544223 MYH3P11055 1940 aa16.58■□□□□ 0.24
HCFC2-202ENST00000544223 SH3TC1Q8TE82 1336 aa16.57■□□□□ 0.24
HCFC2-202ENST00000544223 NTSR2O95665 410 aa16.57■□□□□ 0.24
HCFC2-202ENST00000544223 XAGE2Q96GT9 111 aa16.57■□□□□ 0.24
HCFC2-202ENST00000544223 PLA2G12BQ9BX93 195 aa16.57■□□□□ 0.24
HCFC2-202ENST00000544223 ATRNO75882 1429 aa16.57■□□□□ 0.24
HCFC2-202ENST00000544223 CDHR2Q9BYE9 1310 aa16.57■□□□□ 0.24
HCFC2-202ENST00000544223 ANKRD18BA2A2Z9 1011 aa16.57■□□□□ 0.24
HCFC2-202ENST00000544223 K7ELQ4 463 aaPredicted RBP16.57■□□□□ 0.24
HCFC2-202ENST00000544223 SNX21Q969T3 373 aa16.57■□□□□ 0.24
HCFC2-202ENST00000544223 RIPOR2Q9Y4F9 1068 aa16.57■□□□□ 0.24
HCFC2-202ENST00000544223 ZNF609O15014 1411 aa16.56■□□□□ 0.24
HCFC2-202ENST00000544223 RABEP1Q15276 862 aa16.56■□□□□ 0.24
HCFC2-202ENST00000544223 PRPF40BQ6NWY9 871 aaKnown RBP16.56■□□□□ 0.24
HCFC2-202ENST00000544223 SBF2Q86WG5 1849 aa16.56■□□□□ 0.24
HCFC2-202ENST00000544223 RIC1Q4ADV7 1423 aa16.56■□□□□ 0.24
HCFC2-202ENST00000544223 GORABQ5T7V8 394 aa16.56■□□□□ 0.24
HCFC2-202ENST00000544223 ADCK5Q3MIX3 580 aa16.55■□□□□ 0.24
HCFC2-202ENST00000544223 ARHGEF1Q92888 912 aaKnown RBP16.55■□□□□ 0.24
HCFC2-202ENST00000544223 BRWD3Q6RI45 1802 aa16.55■□□□□ 0.24
HCFC2-202ENST00000544223 SPEF2Q9C093 1822 aa16.55■□□□□ 0.24
HCFC2-202ENST00000544223 FAM196AQ6ZSG2 479 aa16.55■□□□□ 0.24
HCFC2-202ENST00000544223 KIAA1211Q6ZU35 1233 aa16.55■□□□□ 0.24
HCFC2-202ENST00000544223 ZGPATQ8N5A5 531 aaKnown RBP16.55■□□□□ 0.24
HCFC2-202ENST00000544223 HAUS7Q99871 368 aa16.55■□□□□ 0.24
HCFC2-202ENST00000544223 RAD50Q92878 1312 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms