RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 ZNF428Q96B54 188 aa29.74■■■□□ 2.35
CHFR-222ENST00000544093 VPS33BQ9H267 617 aa29.74■■■□□ 2.35
CHFR-222ENST00000544093 FKBP5Q13451 457 aaPredicted RBP29.73■■■□□ 2.35
CHFR-222ENST00000544093 G2E3Q7L622 706 aa29.73■■■□□ 2.35
CHFR-222ENST00000544093 E9PSI1 815 aa29.72■■■□□ 2.35
CHFR-222ENST00000544093 CDHR2Q9BYE9 1310 aa29.71■■■□□ 2.35
CHFR-222ENST00000544093 PDE8AO60658 829 aa29.7■■■□□ 2.35
CHFR-222ENST00000544093 IGKV5-2P06315 115 aa29.7■■■□□ 2.35
CHFR-222ENST00000544093 LRRC37AA6NMS7 1700 aa29.69■■■□□ 2.34
CHFR-222ENST00000544093 FZD9O00144 591 aa29.69■■■□□ 2.34
CHFR-222ENST00000544093 HSPA6P17066 643 aa29.69■■■□□ 2.34
CHFR-222ENST00000544093 FSTL1Q12841 308 aa29.69■■■□□ 2.34
CHFR-222ENST00000544093 CCDC152Q4G0S7 254 aa29.69■■■□□ 2.34
CHFR-222ENST00000544093 DPP8Q6V1X1 898 aaPredicted RBP29.69■■■□□ 2.34
CHFR-222ENST00000544093 RTFDC1Q9BY42 306 aaPredicted RBP29.69■■■□□ 2.34
CHFR-222ENST00000544093 TAF1P21675 1872 aa29.69■■■□□ 2.34
CHFR-222ENST00000544093 NEURL1BA8MQ27 555 aa29.68■■■□□ 2.34
CHFR-222ENST00000544093 LARGE2Q8N3Y3 721 aa29.68■■■□□ 2.34
CHFR-222ENST00000544093 MPNDQ8N594 471 aa29.68■■■□□ 2.34
CHFR-222ENST00000544093 DNAAF4Q8WXU2 420 aa29.68■■■□□ 2.34
CHFR-222ENST00000544093 SCN4AP35499 1836 aa29.67■■■□□ 2.34
CHFR-222ENST00000544093 IQCA1LA6NCM1 817 aa29.67■■■□□ 2.34
CHFR-222ENST00000544093 L3MBTL3Q96JM7 780 aaPredicted RBP29.67■■■□□ 2.34
CHFR-222ENST00000544093 DDNO94850 711 aaPredicted RBP29.66■■■□□ 2.34
CHFR-222ENST00000544093 LINS1Q8NG48 757 aa29.66■■■□□ 2.34
CHFR-222ENST00000544093 MYH3P11055 1940 aa29.66■■■□□ 2.34
CHFR-222ENST00000544093 CWF19L2Q2TBE0 894 aaKnown RBP29.65■■■□□ 2.34
CHFR-222ENST00000544093 SMC1BQ8NDV3 1235 aa29.65■■■□□ 2.34
CHFR-222ENST00000544093 PPIP5K2O43314 1243 aa29.64■■■□□ 2.34
CHFR-222ENST00000544093 EIF6P56537 245 aaKnown RBP29.64■■■□□ 2.34
CHFR-222ENST00000544093 RPS8P62241 208 aaKnown RBP29.64■■■□□ 2.34
CHFR-222ENST00000544093 GPC2Q8N158 579 aa29.64■■■□□ 2.34
CHFR-222ENST00000544093 CELF1Q92879 486 aaKnown RBP29.64■■■□□ 2.34
CHFR-222ENST00000544093 POTECB2RU33 542 aa29.63■■■□□ 2.33
CHFR-222ENST00000544093 DIEXFQ68CQ4 756 aaKnown RBP29.63■■■□□ 2.33
CHFR-222ENST00000544093 NIM1KQ8IY84 436 aa29.63■■■□□ 2.33
CHFR-222ENST00000544093 ZNF541Q9H0D2 1346 aa29.63■■■□□ 2.33
CHFR-222ENST00000544093 SLFN5Q08AF3 891 aa29.62■■■□□ 2.33
CHFR-222ENST00000544093 GCKRQ14397 625 aa29.62■■■□□ 2.33
CHFR-222ENST00000544093 H7C1W4 665 aa29.61■■■□□ 2.33
CHFR-222ENST00000544093 CTSWP56202 376 aa29.6■■■□□ 2.33
CHFR-222ENST00000544093 SLC51AQ86UW1 340 aa29.6■■■□□ 2.33
CHFR-222ENST00000544093 CEP350Q5VT06 3117 aa29.59■■■□□ 2.33
CHFR-222ENST00000544093 APLP1P51693 650 aa29.59■■■□□ 2.33
CHFR-222ENST00000544093 KIAA2012Q0VF49 1180 aa29.59■■■□□ 2.33
CHFR-222ENST00000544093 AOC3Q16853 763 aa29.59■■■□□ 2.33
CHFR-222ENST00000544093 UBE3BQ7Z3V4 1068 aa29.59■■■□□ 2.33
CHFR-222ENST00000544093 JARID2Q92833 1246 aaPredicted RBP29.59■■■□□ 2.33
CHFR-222ENST00000544093 COL4A5P29400 1685 aa29.59■■■□□ 2.33
CHFR-222ENST00000544093 RTL9Q8NET4 1388 aa29.58■■■□□ 2.33
CHFR-222ENST00000544093 CDC5LQ99459 802 aaKnown RBP29.58■■■□□ 2.33
CHFR-222ENST00000544093 NSFL1CQ9UNZ2 370 aaKnown RBP29.58■■■□□ 2.33
CHFR-222ENST00000544093 PLA2G12BQ9BX93 195 aa29.57■■■□□ 2.32
CHFR-222ENST00000544093 ZNRF3Q9ULT6 936 aa29.57■■■□□ 2.32
CHFR-222ENST00000544093 DUOX1Q9NRD9 1551 aa29.56■■■□□ 2.32
CHFR-222ENST00000544093 ANKRD18AQ8IVF6 992 aa29.56■■■□□ 2.32
CHFR-222ENST00000544093 TTLL11Q8NHH1 800 aa29.56■■■□□ 2.32
CHFR-222ENST00000544093 SEC31BQ9NQW1 1179 aa29.56■■■□□ 2.32
CHFR-222ENST00000544093 HACL1Q9UJ83 578 aa29.56■■■□□ 2.32
CHFR-222ENST00000544093 LTBP1Q14766 1721 aa29.55■■■□□ 2.32
CHFR-222ENST00000544093 BEND3Q5T5X7 828 aa29.55■■■□□ 2.32
CHFR-222ENST00000544093 EYA3Q99504 573 aa29.55■■■□□ 2.32
CHFR-222ENST00000544093 F6X3S4 739 aa29.54■■■□□ 2.32
CHFR-222ENST00000544093 TAF1DQ9H5J8 278 aaPredicted RBP29.54■■■□□ 2.32
CHFR-222ENST00000544093 PODXL2Q9NZ53 605 aa29.54■■■□□ 2.32
CHFR-222ENST00000544093 COL4A1P02462 1669 aa29.53■■■□□ 2.32
CHFR-222ENST00000544093 CT47B1P0C2W7 299 aaPredicted RBP29.53■■■□□ 2.32
CHFR-222ENST00000544093 WASHC4Q2M389 1173 aa29.53■■■□□ 2.32
CHFR-222ENST00000544093 PNMA8AQ86V59 439 aaPredicted RBP29.53■■■□□ 2.32
CHFR-222ENST00000544093 TRMT2AQ8IZ69 625 aaKnown RBP29.53■■■□□ 2.32
CHFR-222ENST00000544093 CCDC85AQ96PX6 553 aaPredicted RBP29.53■■■□□ 2.32
CHFR-222ENST00000544093 GJA3Q9Y6H8 435 aa29.53■■■□□ 2.32
CHFR-222ENST00000544093 PTPRCP08575 1304 aa29.52■■■□□ 2.32
CHFR-222ENST00000544093 CASP7P55210 303 aa29.52■■■□□ 2.32
CHFR-222ENST00000544093 GPSM2P81274 684 aa29.52■■■□□ 2.32
CHFR-222ENST00000544093 C6orf229H3BNL8 230 aa29.51■■■□□ 2.31
CHFR-222ENST00000544093 ALDH1L1O75891 902 aa29.51■■■□□ 2.31
CHFR-222ENST00000544093 LMOD1P29536 600 aaPredicted RBP29.51■■■□□ 2.31
CHFR-222ENST00000544093 ALDH1L2Q3SY69 923 aa29.51■■■□□ 2.31
CHFR-222ENST00000544093 CDCA7LQ96GN5 454 aa29.51■■■□□ 2.31
CHFR-222ENST00000544093 GREM2Q9H772 168 aa29.51■■■□□ 2.31
CHFR-222ENST00000544093 ANKIB1Q9P2G1 1089 aa29.51■■■□□ 2.31
CHFR-222ENST00000544093 EPHX2P34913 555 aa29.5■■■□□ 2.31
CHFR-222ENST00000544093 CHADLQ6NUI6 762 aa29.5■■■□□ 2.31
CHFR-222ENST00000544093 LDHDQ86WU2 507 aa29.5■■■□□ 2.31
CHFR-222ENST00000544093 MRPL50Q8N5N7 158 aaKnown RBP29.5■■■□□ 2.31
CHFR-222ENST00000544093 TNIP1Q15025 636 aa29.49■■■□□ 2.31
CHFR-222ENST00000544093 MIER1Q8N108 512 aa29.49■■■□□ 2.31
CHFR-222ENST00000544093 TBC1D16Q8TBP0 767 aa29.49■■■□□ 2.31
CHFR-222ENST00000544093 SRCIN1Q9C0H9 1055 aa29.49■■■□□ 2.31
CHFR-222ENST00000544093 BSDC1Q9NW68 430 aaPredicted RBP29.49■■■□□ 2.31
CHFR-222ENST00000544093 POLLQ9UGP5 575 aa29.49■■■□□ 2.31
CHFR-222ENST00000544093 GGA1Q9UJY5 639 aa29.48■■■□□ 2.31
CHFR-222ENST00000544093 XDHP47989 1333 aa29.47■■■□□ 2.31
CHFR-222ENST00000544093 GRM8O00222 908 aa29.47■■■□□ 2.31
CHFR-222ENST00000544093 CSF1RP07333 972 aa29.47■■■□□ 2.31
CHFR-222ENST00000544093 CXCL9Q07325 125 aa29.47■■■□□ 2.31
CHFR-222ENST00000544093 SLC4A10Q6U841 1118 aa29.47■■■□□ 2.31
CHFR-222ENST00000544093 SSH1Q8WYL5 1049 aa29.47■■■□□ 2.31
CHFR-222ENST00000544093 ZC3H12CQ9C0D7 883 aaKnown RBP29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms