RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 LAS1LQ9Y4W2 734 aaKnown RBP29.55■■■□□ 2.32
CDKN3-207ENST00000543789 ECE1P42892 770 aa29.54■■■□□ 2.32
CDKN3-207ENST00000543789 GMPSP49915 693 aaPredicted RBP29.54■■■□□ 2.32
CDKN3-207ENST00000543789 CIAPIN1Q6FI81 312 aa29.54■■■□□ 2.32
CDKN3-207ENST00000543789 PAXIP1Q6ZW49 1069 aaPredicted RBP29.54■■■□□ 2.32
CDKN3-207ENST00000543789 HSPA8P11142 646 aaKnown RBP29.53■■■□□ 2.32
CDKN3-207ENST00000543789 CAPNS2Q96L46 248 aa29.53■■■□□ 2.32
CDKN3-207ENST00000543789 CHPF2Q9P2E5 772 aa29.53■■■□□ 2.32
CDKN3-207ENST00000543789 TNIP1Q15025 636 aa29.52■■■□□ 2.32
CDKN3-207ENST00000543789 TMC4Q7Z404 712 aa29.52■■■□□ 2.32
CDKN3-207ENST00000543789 RUNDC1Q96C34 613 aa29.52■■■□□ 2.32
CDKN3-207ENST00000543789 TRIM35Q9UPQ4 493 aa29.52■■■□□ 2.32
CDKN3-207ENST00000543789 PLBD2Q8NHP8 589 aa29.51■■■□□ 2.31
CDKN3-207ENST00000543789 GPR101Q96P66 508 aaPredicted RBP29.51■■■□□ 2.31
CDKN3-207ENST00000543789 BCL2L13Q9BXK5 485 aa29.51■■■□□ 2.31
CDKN3-207ENST00000543789 TLL2Q9Y6L7 1015 aa29.51■■■□□ 2.31
CDKN3-207ENST00000543789 MYBBP1AQ9BQG0 1328 aaKnown RBP29.5■■■□□ 2.31
CDKN3-207ENST00000543789 RAD17O75943 681 aa29.5■■■□□ 2.31
CDKN3-207ENST00000543789 HDGFL1Q5TGJ6 251 aa29.5■■■□□ 2.31
CDKN3-207ENST00000543789 CYP4F22Q6NT55 531 aa29.5■■■□□ 2.31
CDKN3-207ENST00000543789 ANKRD13DQ6ZTN6 518 aa29.5■■■□□ 2.31
CDKN3-207ENST00000543789 GRM1Q13255 1194 aa29.49■■■□□ 2.31
CDKN3-207ENST00000543789 ZNF428Q96B54 188 aa29.49■■■□□ 2.31
CDKN3-207ENST00000543789 BEGAINQ9BUH8 593 aa29.49■■■□□ 2.31
CDKN3-207ENST00000543789 PGAP2Q9UHJ9 254 aa29.49■■■□□ 2.31
CDKN3-207ENST00000543789 CDHR2Q9BYE9 1310 aa29.48■■■□□ 2.31
CDKN3-207ENST00000543789 HOXB7P09629 217 aa29.48■■■□□ 2.31
CDKN3-207ENST00000543789 DDX10Q13206 875 aaKnown RBP29.48■■■□□ 2.31
CDKN3-207ENST00000543789 WDR43Q15061 677 aaKnown RBP eCLIP29.48■■■□□ 2.31
CDKN3-207ENST00000543789 ZC3H15Q8WU90 426 aaKnown RBP29.47■■■□□ 2.31
CDKN3-207ENST00000543789 ISCA1Q9BUE6 129 aa29.47■■■□□ 2.31
CDKN3-207ENST00000543789 DBF4Q9UBU7 674 aaPredicted RBP29.47■■■□□ 2.31
CDKN3-207ENST00000543789 CELF2O95319 508 aaKnown RBP29.46■■■□□ 2.31
CDKN3-207ENST00000543789 YDJCA8MPS7 323 aa29.45■■■□□ 2.31
CDKN3-207ENST00000543789 SF3B3Q15393 1217 aaKnown RBP29.45■■■□□ 2.31
CDKN3-207ENST00000543789 FAM89AQ96GI7 184 aa29.45■■■□□ 2.31
CDKN3-207ENST00000543789 GLIS2Q9BZE0 524 aaPredicted RBP29.45■■■□□ 2.31
CDKN3-207ENST00000543789 CNOT7Q9UIV1 285 aaKnown RBP29.45■■■□□ 2.31
CDKN3-207ENST00000543789 ATP5J2-PTCD1G3V325 749 aa29.44■■■□□ 2.3
CDKN3-207ENST00000543789 HIRAP54198 1017 aaPredicted RBP29.44■■■□□ 2.3
CDKN3-207ENST00000543789 SAPCD2Q86UD0 394 aa29.44■■■□□ 2.3
CDKN3-207ENST00000543789 ADAMTS8Q9UP79 889 aa29.44■■■□□ 2.3
CDKN3-207ENST00000543789 H7C1D1 291 aa29.43■■■□□ 2.3
CDKN3-207ENST00000543789 MAP2K2P36507 400 aa29.43■■■□□ 2.3
CDKN3-207ENST00000543789 WASHC4Q2M389 1173 aa29.43■■■□□ 2.3
CDKN3-207ENST00000543789 CFAP44Q96MT7 982 aa29.43■■■□□ 2.3
CDKN3-207ENST00000543789 HYPKQ9NX55 129 aa29.43■■■□□ 2.3
CDKN3-207ENST00000543789 NSFL1CQ9UNZ2 370 aaKnown RBP29.43■■■□□ 2.3
CDKN3-207ENST00000543789 DUSP27Q5VZP5 1158 aa29.42■■■□□ 2.3
CDKN3-207ENST00000543789 CDC37L1Q7L3B6 337 aa29.42■■■□□ 2.3
CDKN3-207ENST00000543789 TRPM4Q8TD43 1214 aa29.42■■■□□ 2.3
CDKN3-207ENST00000543789 CELF1Q92879 486 aaKnown RBP29.42■■■□□ 2.3
CDKN3-207ENST00000543789 AOC2O75106 756 aa29.4■■■□□ 2.3
CDKN3-207ENST00000543789 TRIM28Q13263 835 aaKnown RBP29.4■■■□□ 2.3
CDKN3-207ENST00000543789 HHIPL1Q96JK4 782 aa29.4■■■□□ 2.3
CDKN3-207ENST00000543789 RTL5Q5HYW3 569 aaPredicted RBP29.39■■■□□ 2.3
CDKN3-207ENST00000543789 MICALL2Q8IY33 904 aa29.39■■■□□ 2.3
CDKN3-207ENST00000543789 DPF2Q92785 391 aa29.39■■■□□ 2.3
CDKN3-207ENST00000543789 ABHD8Q96I13 439 aa29.39■■■□□ 2.3
CDKN3-207ENST00000543789 ZNF408Q9H9D4 720 aa29.39■■■□□ 2.3
CDKN3-207ENST00000543789 ZBTB12Q9Y330 459 aaPredicted RBP29.39■■■□□ 2.3
CDKN3-207ENST00000543789 SHTN1A0MZ66 631 aa29.38■■■□□ 2.29
CDKN3-207ENST00000543789 C6orf229H3BNL8 230 aa29.38■■■□□ 2.29
CDKN3-207ENST00000543789 RIMBP2O15034 1052 aa29.38■■■□□ 2.29
CDKN3-207ENST00000543789 POLLQ9UGP5 575 aa29.38■■■□□ 2.29
CDKN3-207ENST00000543789 PSMD14O00487 310 aa29.37■■■□□ 2.29
CDKN3-207ENST00000543789 IRS4O14654 1257 aaPredicted RBP29.37■■■□□ 2.29
CDKN3-207ENST00000543789 DBNDD1Q9H9R9 158 aa29.37■■■□□ 2.29
CDKN3-207ENST00000543789 GPSM2P81274 684 aa29.36■■■□□ 2.29
CDKN3-207ENST00000543789 USP48Q86UV5 1035 aa29.36■■■□□ 2.29
CDKN3-207ENST00000543789 MBIPQ9NS73 344 aa29.36■■■□□ 2.29
CDKN3-207ENST00000543789 ANKRD36CQ5JPF3 1778 aa29.36■■■□□ 2.29
CDKN3-207ENST00000543789 RPS8P62241 208 aaKnown RBP29.35■■■□□ 2.29
CDKN3-207ENST00000543789 RIC3Q7Z5B4 369 aa29.35■■■□□ 2.29
CDKN3-207ENST00000543789 EYA3Q99504 573 aa29.35■■■□□ 2.29
CDKN3-207ENST00000543789 SAMD7Q7Z3H4 446 aa29.34■■■□□ 2.29
CDKN3-207ENST00000543789 CA12O43570 354 aa29.33■■■□□ 2.29
CDKN3-207ENST00000543789 ZBTB38Q8NAP3 1195 aaPredicted RBP29.33■■■□□ 2.29
CDKN3-207ENST00000543789 TSKSQ9UJT2 592 aa29.33■■■□□ 2.29
CDKN3-207ENST00000543789 LAMB2P55268 1798 aa29.33■■■□□ 2.29
CDKN3-207ENST00000543789 DUOX1Q9NRD9 1551 aa29.32■■■□□ 2.28
CDKN3-207ENST00000543789 ZNF853P0CG23 659 aa29.32■■■□□ 2.28
CDKN3-207ENST00000543789 RPS12P25398 132 aaKnown RBP29.32■■■□□ 2.28
CDKN3-207ENST00000543789 GOLGA2Q08379 1002 aa29.32■■■□□ 2.28
CDKN3-207ENST00000543789 DOK7Q18PE1 504 aa29.32■■■□□ 2.28
CDKN3-207ENST00000543789 ECE2O60344 883 aa29.31■■■□□ 2.28
CDKN3-207ENST00000543789 HSP90B1P14625 803 aaKnown RBP29.31■■■□□ 2.28
CDKN3-207ENST00000543789 BRPF1P55201 1214 aaPredicted RBP29.31■■■□□ 2.28
CDKN3-207ENST00000543789 TBC1D16Q8TBP0 767 aa29.31■■■□□ 2.28
CDKN3-207ENST00000543789 KCNQ5Q9NR82 932 aa29.31■■■□□ 2.28
CDKN3-207ENST00000543789 TBC1D10BQ4KMP7 808 aaPredicted RBP29.3■■■□□ 2.28
CDKN3-207ENST00000543789 THSD7BQ9C0I4 1608 aa29.3■■■□□ 2.28
CDKN3-207ENST00000543789 TRPM7Q96QT4 1865 aa29.29■■■□□ 2.28
CDKN3-207ENST00000543789 RBM26Q5T8P6 1007 aaKnown RBP29.29■■■□□ 2.28
CDKN3-207ENST00000543789 KRT26Q7Z3Y9 468 aa29.29■■■□□ 2.28
CDKN3-207ENST00000543789 ZC3H12CQ9C0D7 883 aaKnown RBP29.29■■■□□ 2.28
CDKN3-207ENST00000543789 PHAXQ9H814 394 aaKnown RBP29.29■■■□□ 2.28
CDKN3-207ENST00000543789 IFT57Q9NWB7 429 aa29.29■■■□□ 2.28
CDKN3-207ENST00000543789 ELL2O00472 640 aaPredicted RBP29.28■■■□□ 2.28
CDKN3-207ENST00000543789 HUNKP57058 714 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 194 ms