RNA–Protein interactions for RNA: ENST00000543585.1

SCNN1A-220, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-220ENST00000543585 GRAPLQ8TC17 118 aaPredicted RBP20.24■□□□□ 0.83
SCNN1A-220ENST00000543585 PSMD1Q99460 953 aa20.24■□□□□ 0.83
SCNN1A-220ENST00000543585 ATP6V0A2Q9Y487 856 aa20.24■□□□□ 0.83
SCNN1A-220ENST00000543585 CC2D2BQ6DHV5 1058 aa20.23■□□□□ 0.83
SCNN1A-220ENST00000543585 DDX46Q7L014 1031 aaKnown RBP20.23■□□□□ 0.83
SCNN1A-220ENST00000543585 DNAAF4Q8WXU2 420 aa20.23■□□□□ 0.83
SCNN1A-220ENST00000543585 CELF1Q92879 486 aaKnown RBP20.23■□□□□ 0.83
SCNN1A-220ENST00000543585 KDM2BQ8NHM5 1336 aa20.23■□□□□ 0.83
SCNN1A-220ENST00000543585 SCN4AP35499 1836 aa20.23■□□□□ 0.83
SCNN1A-220ENST00000543585 F6X3S4 739 aa20.22■□□□□ 0.83
SCNN1A-220ENST00000543585 IARSP41252 1262 aaKnown RBP20.22■□□□□ 0.83
SCNN1A-220ENST00000543585 RRAGCQ9HB90 399 aa20.22■□□□□ 0.83
SCNN1A-220ENST00000543585 CDHR2Q9BYE9 1310 aa20.22■□□□□ 0.83
SCNN1A-220ENST00000543585 POTECB2RU33 542 aa20.21■□□□□ 0.83
SCNN1A-220ENST00000543585 BBOX1O75936 387 aa20.21■□□□□ 0.83
SCNN1A-220ENST00000543585 NEXNQ0ZGT2 675 aa20.21■□□□□ 0.83
SCNN1A-220ENST00000543585 SP8Q8IXZ3 490 aa20.21■□□□□ 0.83
SCNN1A-220ENST00000543585 ZNF541Q9H0D2 1346 aa20.21■□□□□ 0.83
SCNN1A-220ENST00000543585 H7C1W4 665 aa20.2■□□□□ 0.82
SCNN1A-220ENST00000543585 PDE8AO60658 829 aa20.2■□□□□ 0.82
SCNN1A-220ENST00000543585 CASP7P55210 303 aa20.2■□□□□ 0.82
SCNN1A-220ENST00000543585 SEC31BQ9NQW1 1179 aa20.2■□□□□ 0.82
SCNN1A-220ENST00000543585 A0A1B0GUL6 1792 aa20.2■□□□□ 0.82
SCNN1A-220ENST00000543585 GCKRQ14397 625 aa20.19■□□□□ 0.82
SCNN1A-220ENST00000543585 CCDC85AQ96PX6 553 aaPredicted RBP20.19■□□□□ 0.82
SCNN1A-220ENST00000543585 DDNO94850 711 aaPredicted RBP20.18■□□□□ 0.82
SCNN1A-220ENST00000543585 BEND3Q5T5X7 828 aa20.18■□□□□ 0.82
SCNN1A-220ENST00000543585 UBE3BQ7Z3V4 1068 aa20.18■□□□□ 0.82
SCNN1A-220ENST00000543585 MRPL50Q8N5N7 158 aaKnown RBP20.18■□□□□ 0.82
SCNN1A-220ENST00000543585 LINS1Q8NG48 757 aa20.18■□□□□ 0.82
SCNN1A-220ENST00000543585 RTFDC1Q9BY42 306 aaPredicted RBP20.18■□□□□ 0.82
SCNN1A-220ENST00000543585 CEP350Q5VT06 3117 aa20.18■□□□□ 0.82
SCNN1A-220ENST00000543585 SCN9AQ15858 1988 aa20.17■□□□□ 0.82
SCNN1A-220ENST00000543585 FZD9O00144 591 aa20.17■□□□□ 0.82
SCNN1A-220ENST00000543585 GRIPAP1Q4V328 841 aa20.17■□□□□ 0.82
SCNN1A-220ENST00000543585 SSH1Q8WYL5 1049 aa20.17■□□□□ 0.82
SCNN1A-220ENST00000543585 CTSWP56202 376 aa20.16■□□□□ 0.82
SCNN1A-220ENST00000543585 TOMM70O94826 608 aa20.15■□□□□ 0.82
SCNN1A-220ENST00000543585 AOC3Q16853 763 aa20.15■□□□□ 0.82
SCNN1A-220ENST00000543585 MPNDQ8N594 471 aa20.15■□□□□ 0.82
SCNN1A-220ENST00000543585 TTLL11Q8NHH1 800 aa20.15■□□□□ 0.82
SCNN1A-220ENST00000543585 BCL2L13Q9BXK5 485 aa20.15■□□□□ 0.82
SCNN1A-220ENST00000543585 PSME4Q14997 1843 aa20.14■□□□□ 0.81
SCNN1A-220ENST00000543585 RPS8P62241 208 aaKnown RBP20.14■□□□□ 0.81
SCNN1A-220ENST00000543585 CCDC152Q4G0S7 254 aa20.14■□□□□ 0.81
SCNN1A-220ENST00000543585 DPY19L2Q6NUT2 758 aa20.14■□□□□ 0.81
SCNN1A-220ENST00000543585 DPP8Q6V1X1 898 aaPredicted RBP20.14■□□□□ 0.81
SCNN1A-220ENST00000543585 TMC4Q7Z404 712 aa20.14■□□□□ 0.81
SCNN1A-220ENST00000543585 PPIP5K2O43314 1243 aa20.13■□□□□ 0.81
SCNN1A-220ENST00000543585 HSP90B1P14625 803 aaKnown RBP20.13■□□□□ 0.81
SCNN1A-220ENST00000543585 GPSM2P81274 684 aa20.13■□□□□ 0.81
SCNN1A-220ENST00000543585 LARGE2Q8N3Y3 721 aa20.13■□□□□ 0.81
SCNN1A-220ENST00000543585 PLA2G12BQ9BX93 195 aa20.13■□□□□ 0.81
SCNN1A-220ENST00000543585 GREM2Q9H772 168 aa20.13■□□□□ 0.81
SCNN1A-220ENST00000543585 ADAMTSL1Q8N6G6 1762 aa20.13■□□□□ 0.81
SCNN1A-220ENST00000543585 RTL9Q8NET4 1388 aa20.12■□□□□ 0.81
SCNN1A-220ENST00000543585 VEGFAP15692 232 aaPredicted RBP20.12■□□□□ 0.81
SCNN1A-220ENST00000543585 RBM46Q8TBY0 533 aaKnown RBP20.12■□□□□ 0.81
SCNN1A-220ENST00000543585 L3MBTL3Q96JM7 780 aaPredicted RBP20.12■□□□□ 0.81
SCNN1A-220ENST00000543585 TMX4Q9H1E5 349 aaPredicted RBP20.11■□□□□ 0.81
SCNN1A-220ENST00000543585 POLLQ9UGP5 575 aa20.11■□□□□ 0.81
SCNN1A-220ENST00000543585 ZNF646O15015 1829 aaPredicted RBP20.11■□□□□ 0.81
SCNN1A-220ENST00000543585 KIAA2012Q0VF49 1180 aa20.1■□□□□ 0.81
SCNN1A-220ENST00000543585 SLC4A10Q6U841 1118 aa20.1■□□□□ 0.81
SCNN1A-220ENST00000543585 SUPT20HQ8NEM7 779 aa20.1■□□□□ 0.81
SCNN1A-220ENST00000543585 JDP2Q8WYK2 163 aa20.1■□□□□ 0.81
SCNN1A-220ENST00000543585 GPR101Q96P66 508 aaPredicted RBP20.1■□□□□ 0.81
SCNN1A-220ENST00000543585 NSFL1CQ9UNZ2 370 aaKnown RBP20.1■□□□□ 0.81
SCNN1A-220ENST00000543585 CSF1RP07333 972 aa20.09■□□□□ 0.81
SCNN1A-220ENST00000543585 FOXO4P98177 505 aa20.09■□□□□ 0.81
SCNN1A-220ENST00000543585 ALDH1L2Q3SY69 923 aa20.09■□□□□ 0.81
SCNN1A-220ENST00000543585 EPHA10Q5JZY3 1008 aa20.09■□□□□ 0.81
SCNN1A-220ENST00000543585 NIM1KQ8IY84 436 aa20.09■□□□□ 0.81
SCNN1A-220ENST00000543585 C16orf71Q8IYS4 520 aaPredicted RBP20.09■□□□□ 0.81
SCNN1A-220ENST00000543585 VPS33BQ9H267 617 aa20.09■□□□□ 0.81
SCNN1A-220ENST00000543585 POTEIP0CG38 1075 aa20.08■□□□□ 0.81
SCNN1A-220ENST00000543585 POTEJP0CG39 1038 aa20.08■□□□□ 0.81
SCNN1A-220ENST00000543585 FAM161AQ3B820 660 aa20.08■□□□□ 0.81
SCNN1A-220ENST00000543585 ANKRD18AQ8IVF6 992 aa20.08■□□□□ 0.81
SCNN1A-220ENST00000543585 PTPRCP08575 1304 aa20.07■□□□□ 0.8
SCNN1A-220ENST00000543585 POLR2AP24928 1970 aaKnown RBP20.07■□□□□ 0.8
SCNN1A-220ENST00000543585 YDJCA8MPS7 323 aa20.07■□□□□ 0.8
SCNN1A-220ENST00000543585 GRM8O00222 908 aa20.07■□□□□ 0.8
SCNN1A-220ENST00000543585 ALDH1L1O75891 902 aa20.07■□□□□ 0.8
SCNN1A-220ENST00000543585 HSPA6P17066 643 aa20.07■□□□□ 0.8
SCNN1A-220ENST00000543585 EIF6P56537 245 aaKnown RBP20.07■□□□□ 0.8
SCNN1A-220ENST00000543585 HNRNPUQ00839 825 aaKnown RBP eCLIP20.07■□□□□ 0.8
SCNN1A-220ENST00000543585 GPC2Q8N158 579 aa20.07■□□□□ 0.8
SCNN1A-220ENST00000543585 TBC1D16Q8TBP0 767 aa20.07■□□□□ 0.8
SCNN1A-220ENST00000543585 SRCIN1Q9C0H9 1055 aa20.07■□□□□ 0.8
SCNN1A-220ENST00000543585 SMC4Q9NTJ3 1288 aa20.07■□□□□ 0.8
SCNN1A-220ENST00000543585 PODXL2Q9NZ53 605 aa20.07■□□□□ 0.8
SCNN1A-220ENST00000543585 WTIPA6NIX2 430 aaPredicted RBP20.06■□□□□ 0.8
SCNN1A-220ENST00000543585 TAF1DQ9H5J8 278 aaPredicted RBP20.06■□□□□ 0.8
SCNN1A-220ENST00000543585 C6orf229H3BNL8 230 aa20.05■□□□□ 0.8
SCNN1A-220ENST00000543585 CT47B1P0C2W7 299 aaPredicted RBP20.05■□□□□ 0.8
SCNN1A-220ENST00000543585 ITGA6P23229 1130 aa20.05■□□□□ 0.8
SCNN1A-220ENST00000543585 CXCL9Q07325 125 aa20.05■□□□□ 0.8
SCNN1A-220ENST00000543585 KAZALD1Q96I82 304 aa20.05■□□□□ 0.8
SCNN1A-220ENST00000543585 CDC5LQ99459 802 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms