RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 JARID2Q92833 1246 aaPredicted RBP12.57□□□□□ -0.4
VEGFB-204ENST00000543462 CNKSR1Q969H4 720 aa12.57□□□□□ -0.4
VEGFB-204ENST00000543462 NLRP3Q96P20 1036 aa12.57□□□□□ -0.4
VEGFB-204ENST00000543462 USP44Q9H0E7 712 aa12.57□□□□□ -0.4
VEGFB-204ENST00000543462 PSME4Q14997 1843 aa12.56□□□□□ -0.4
VEGFB-204ENST00000543462 CSF1RP07333 972 aa12.56□□□□□ -0.4
VEGFB-204ENST00000543462 NBPF7P0C2Y1 421 aaPredicted RBP12.56□□□□□ -0.4
VEGFB-204ENST00000543462 RLBP1P12271 317 aa12.56□□□□□ -0.4
VEGFB-204ENST00000543462 CCT4P50991 539 aaKnown RBP12.56□□□□□ -0.4
VEGFB-204ENST00000543462 FOXO4P98177 505 aa12.56□□□□□ -0.4
VEGFB-204ENST00000543462 RTL5Q5HYW3 569 aaPredicted RBP12.56□□□□□ -0.4
VEGFB-204ENST00000543462 EPHA10Q5JZY3 1008 aa12.56□□□□□ -0.4
VEGFB-204ENST00000543462 ZKSCAN2Q63HK3 967 aa12.56□□□□□ -0.4
VEGFB-204ENST00000543462 COL4A5P29400 1685 aa12.55□□□□□ -0.4
VEGFB-204ENST00000543462 IPO8O15397 1037 aaKnown RBP12.55□□□□□ -0.4
VEGFB-204ENST00000543462 RABL6Q3YEC7 729 aaPredicted RBP12.55□□□□□ -0.4
VEGFB-204ENST00000543462 TTLL11Q8NHH1 800 aa12.55□□□□□ -0.4
VEGFB-204ENST00000543462 WWC3Q9ULE0 1092 aa12.55□□□□□ -0.4
VEGFB-204ENST00000543462 BCS1LQ9Y276 419 aa12.55□□□□□ -0.4
VEGFB-204ENST00000543462 HSP90B1P14625 803 aaKnown RBP12.54□□□□□ -0.4
VEGFB-204ENST00000543462 PRELPP51888 382 aa12.54□□□□□ -0.4
VEGFB-204ENST00000543462 ANKRD44Q8N8A2 993 aa12.54□□□□□ -0.4
VEGFB-204ENST00000543462 ZNF622Q969S3 477 aaKnown RBP eCLIP12.54□□□□□ -0.4
VEGFB-204ENST00000543462 SUCLG2Q96I99 432 aa12.54□□□□□ -0.4
VEGFB-204ENST00000543462 LTBP3Q9NS15 1303 aa12.54□□□□□ -0.4
VEGFB-204ENST00000543462 NFKBIEO00221 500 aa12.53□□□□□ -0.4
VEGFB-204ENST00000543462 ALDH1B1P30837 517 aa12.53□□□□□ -0.4
VEGFB-204ENST00000543462 GRAPQ13588 217 aa12.53□□□□□ -0.4
VEGFB-204ENST00000543462 TMEM57Q8N5G2 664 aa12.53□□□□□ -0.4
VEGFB-204ENST00000543462 GRAPLQ8TC17 118 aaPredicted RBP12.53□□□□□ -0.4
VEGFB-204ENST00000543462 RPGRQ92834 1020 aaKnown RBP12.53□□□□□ -0.4
VEGFB-204ENST00000543462 FRAT1Q92837 279 aaPredicted RBP12.53□□□□□ -0.4
VEGFB-204ENST00000543462 CELF1Q92879 486 aaKnown RBP12.53□□□□□ -0.4
VEGFB-204ENST00000543462 RBM17Q96I25 401 aaKnown RBP12.53□□□□□ -0.4
VEGFB-204ENST00000543462 MEIS3Q99687 375 aa12.53□□□□□ -0.4
VEGFB-204ENST00000543462 GREM2Q9H772 168 aa12.53□□□□□ -0.4
VEGFB-204ENST00000543462 ARAP2Q8WZ64 1704 aa12.53□□□□□ -0.4
VEGFB-204ENST00000543462 GRIN3BO60391 1043 aa12.52□□□□□ -0.41
VEGFB-204ENST00000543462 GPR162Q16538 588 aa12.52□□□□□ -0.41
VEGFB-204ENST00000543462 FAM161AQ3B820 660 aa12.52□□□□□ -0.41
VEGFB-204ENST00000543462 CCDC152Q4G0S7 254 aa12.52□□□□□ -0.41
VEGFB-204ENST00000543462 OLFM4Q6UX06 510 aa12.52□□□□□ -0.41
VEGFB-204ENST00000543462 SEC31BQ9NQW1 1179 aa12.52□□□□□ -0.41
VEGFB-204ENST00000543462 ATP6V0A2Q9Y487 856 aa12.52□□□□□ -0.41
VEGFB-204ENST00000543462 SCN9AQ15858 1988 aa12.51□□□□□ -0.41
VEGFB-204ENST00000543462 PPEF1O14829 653 aaPredicted RBP12.51□□□□□ -0.41
VEGFB-204ENST00000543462 C21orf2O43822 256 aa12.51□□□□□ -0.41
VEGFB-204ENST00000543462 DDX46Q7L014 1031 aaKnown RBP12.51□□□□□ -0.41
VEGFB-204ENST00000543462 TMC4Q7Z404 712 aa12.51□□□□□ -0.41
VEGFB-204ENST00000543462 DZIP1LQ8IYY4 767 aaKnown RBP12.51□□□□□ -0.41
VEGFB-204ENST00000543462 CLUAP1Q96AJ1 413 aa12.51□□□□□ -0.41
VEGFB-204ENST00000543462 C9orf78Q9NZ63 289 aaPredicted RBP12.51□□□□□ -0.41
VEGFB-204ENST00000543462 BBOX1O75936 387 aa12.5□□□□□ -0.41
VEGFB-204ENST00000543462 SOGA3Q5TF21 947 aa12.5□□□□□ -0.41
VEGFB-204ENST00000543462 BICC1Q9H694 974 aaKnown RBP12.5□□□□□ -0.41
VEGFB-204ENST00000543462 RASSF7Q02833 373 aa12.49□□□□□ -0.41
VEGFB-204ENST00000543462 MTX1Q13505 466 aa12.49□□□□□ -0.41
VEGFB-204ENST00000543462 CCDC93Q567U6 631 aa12.49□□□□□ -0.41
VEGFB-204ENST00000543462 CC2D2BQ6DHV5 1058 aa12.49□□□□□ -0.41
VEGFB-204ENST00000543462 LMBR1LQ6UX01 489 aa12.49□□□□□ -0.41
VEGFB-204ENST00000543462 SP8Q8IXZ3 490 aa12.49□□□□□ -0.41
VEGFB-204ENST00000543462 PELP1Q8IZL8 1130 aaKnown RBP12.49□□□□□ -0.41
VEGFB-204ENST00000543462 PANK1Q8TE04 598 aa12.49□□□□□ -0.41
VEGFB-204ENST00000543462 PSMD1Q99460 953 aa12.49□□□□□ -0.41
VEGFB-204ENST00000543462 RTFDC1Q9BY42 306 aaPredicted RBP12.49□□□□□ -0.41
VEGFB-204ENST00000543462 PLIN1O60240 522 aa12.48□□□□□ -0.41
VEGFB-204ENST00000543462 ITGA6P23229 1130 aa12.48□□□□□ -0.41
VEGFB-204ENST00000543462 RFX5P48382 616 aaPredicted RBP12.48□□□□□ -0.41
VEGFB-204ENST00000543462 RPS8P62241 208 aaKnown RBP12.48□□□□□ -0.41
VEGFB-204ENST00000543462 PDE3AQ14432 1141 aa12.48□□□□□ -0.41
VEGFB-204ENST00000543462 C20orf194Q5TEA3 1177 aa12.48□□□□□ -0.41
VEGFB-204ENST00000543462 CCDC85AQ96PX6 553 aaPredicted RBP12.48□□□□□ -0.41
VEGFB-204ENST00000543462 ZBTB7BO15156 539 aaPredicted RBP12.47□□□□□ -0.41
VEGFB-204ENST00000543462 UBTFL1P0CB47 393 aaPredicted RBP12.47□□□□□ -0.41
VEGFB-204ENST00000543462 RRP1P56182 461 aaKnown RBP12.47□□□□□ -0.41
VEGFB-204ENST00000543462 FKBP4Q02790 459 aaKnown RBP eCLIP12.47□□□□□ -0.41
VEGFB-204ENST00000543462 MVPQ14764 893 aaKnown RBP12.47□□□□□ -0.41
VEGFB-204ENST00000543462 GRIPAP1Q4V328 841 aa12.47□□□□□ -0.41
VEGFB-204ENST00000543462 FTSJ3Q8IY81 847 aaKnown RBP12.47□□□□□ -0.41
VEGFB-204ENST00000543462 CDC5LQ99459 802 aaKnown RBP12.47□□□□□ -0.41
VEGFB-204ENST00000543462 TAOK3Q9H2K8 898 aa12.47□□□□□ -0.41
VEGFB-204ENST00000543462 PODXL2Q9NZ53 605 aa12.47□□□□□ -0.41
VEGFB-204ENST00000543462 LRRFIP2Q9Y608 721 aaKnown RBP12.47□□□□□ -0.41
VEGFB-204ENST00000543462 WDR90Q96KV7 1748 aa12.47□□□□□ -0.41
VEGFB-204ENST00000543462 GNAI3P08754 354 aa12.46□□□□□ -0.41
VEGFB-204ENST00000543462 RTKN2Q8IZC4 609 aa12.46□□□□□ -0.41
VEGFB-204ENST00000543462 BSDC1Q9NW68 430 aaPredicted RBP12.46□□□□□ -0.41
VEGFB-204ENST00000543462 MYH13Q9UKX3 1938 aa12.46□□□□□ -0.42
VEGFB-204ENST00000543462 ZC3H4Q9UPT8 1303 aaKnown RBP12.45□□□□□ -0.42
VEGFB-204ENST00000543462 IRS2Q9Y4H2 1338 aa12.45□□□□□ -0.42
VEGFB-204ENST00000543462 MS4A1P11836 297 aa12.45□□□□□ -0.42
VEGFB-204ENST00000543462 ARHGAP27Q6ZUM4 889 aa12.45□□□□□ -0.42
VEGFB-204ENST00000543462 ANKRD18AQ8IVF6 992 aa12.45□□□□□ -0.42
VEGFB-204ENST00000543462 ITPRIPQ8IWB1 547 aa12.45□□□□□ -0.42
VEGFB-204ENST00000543462 ZNF219Q9P2Y4 722 aaPredicted RBP12.45□□□□□ -0.42
VEGFB-204ENST00000543462 ANKRD18BA2A2Z9 1011 aa12.44□□□□□ -0.42
VEGFB-204ENST00000543462 DCAF8L1A6NGE4 600 aa12.44□□□□□ -0.42
VEGFB-204ENST00000543462 LMNB1P20700 586 aa12.44□□□□□ -0.42
VEGFB-204ENST00000543462 GPSM2P81274 684 aa12.44□□□□□ -0.42
VEGFB-204ENST00000543462 IFIT5Q13325 482 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms