RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 DUOX1Q9NRD9 1551 aa23.93■■□□□ 1.42
TMED3-204ENST00000543455 DDX58O95786 925 aaKnown RBP23.93■■□□□ 1.42
TMED3-204ENST00000543455 IGKV5-2P06315 115 aa23.93■■□□□ 1.42
TMED3-204ENST00000543455 SP8Q8IXZ3 490 aa23.93■■□□□ 1.42
TMED3-204ENST00000543455 L3MBTL3Q96JM7 780 aaPredicted RBP23.93■■□□□ 1.42
TMED3-204ENST00000543455 STK31Q9BXU1 1019 aa23.93■■□□□ 1.42
TMED3-204ENST00000543455 SCN4AP35499 1836 aa23.93■■□□□ 1.42
TMED3-204ENST00000543455 SLC4A2P04920 1241 aa23.92■■□□□ 1.42
TMED3-204ENST00000543455 JARID2Q92833 1246 aaPredicted RBP23.92■■□□□ 1.42
TMED3-204ENST00000543455 CELF1Q92879 486 aaKnown RBP23.92■■□□□ 1.42
TMED3-204ENST00000543455 PCCAP05165 728 aaPredicted RBP23.91■■□□□ 1.42
TMED3-204ENST00000543455 RTFDC1Q9BY42 306 aaPredicted RBP23.91■■□□□ 1.42
TMED3-204ENST00000543455 POTEIP0CG38 1075 aa23.9■■□□□ 1.42
TMED3-204ENST00000543455 POTEJP0CG39 1038 aa23.9■■□□□ 1.42
TMED3-204ENST00000543455 SMC1BQ8NDV3 1235 aa23.9■■□□□ 1.42
TMED3-204ENST00000543455 CWC25Q9NXE8 425 aaPredicted RBP23.9■■□□□ 1.42
TMED3-204ENST00000543455 LTBP1Q14766 1721 aa23.9■■□□□ 1.42
TMED3-204ENST00000543455 APLP1P51693 650 aa23.88■■□□□ 1.41
TMED3-204ENST00000543455 FLIIQ13045 1269 aa23.88■■□□□ 1.41
TMED3-204ENST00000543455 AOC3Q16853 763 aa23.87■■□□□ 1.41
TMED3-204ENST00000543455 CWF19L2Q2TBE0 894 aaKnown RBP23.87■■□□□ 1.41
TMED3-204ENST00000543455 LARGE2Q8N3Y3 721 aa23.87■■□□□ 1.41
TMED3-204ENST00000543455 MPNDQ8N594 471 aa23.87■■□□□ 1.41
TMED3-204ENST00000543455 JDP2Q8WYK2 163 aa23.87■■□□□ 1.41
TMED3-204ENST00000543455 ADAMTSL1Q8N6G6 1762 aa23.86■■□□□ 1.41
TMED3-204ENST00000543455 PPIP5K2O43314 1243 aa23.86■■□□□ 1.41
TMED3-204ENST00000543455 HTRA3P83110 453 aa23.86■■□□□ 1.41
TMED3-204ENST00000543455 DPP8Q6V1X1 898 aaPredicted RBP23.86■■□□□ 1.41
TMED3-204ENST00000543455 TAF1DQ9H5J8 278 aaPredicted RBP23.86■■□□□ 1.41
TMED3-204ENST00000543455 SEC31BQ9NQW1 1179 aa23.86■■□□□ 1.41
TMED3-204ENST00000543455 MYH3P11055 1940 aa23.86■■□□□ 1.41
TMED3-204ENST00000543455 CDHR2Q9BYE9 1310 aa23.86■■□□□ 1.41
TMED3-204ENST00000543455 NEURL1BA8MQ27 555 aa23.85■■□□□ 1.41
TMED3-204ENST00000543455 TMC4Q7Z404 712 aa23.85■■□□□ 1.41
TMED3-204ENST00000543455 GPC2Q8N158 579 aa23.85■■□□□ 1.41
TMED3-204ENST00000543455 MYH16Q9H6N6 1097 aa23.85■■□□□ 1.41
TMED3-204ENST00000543455 PDE8AO60658 829 aa23.84■■□□□ 1.41
TMED3-204ENST00000543455 DNAJC5GQ8N7S2 189 aa23.84■■□□□ 1.41
TMED3-204ENST00000543455 TMX4Q9H1E5 349 aaPredicted RBP23.84■■□□□ 1.41
TMED3-204ENST00000543455 VPS33BQ9H267 617 aa23.84■■□□□ 1.41
TMED3-204ENST00000543455 IQCA1LA6NCM1 817 aa23.82■■□□□ 1.4
TMED3-204ENST00000543455 EIF6P56537 245 aaKnown RBP23.82■■□□□ 1.4
TMED3-204ENST00000543455 KIAA2012Q0VF49 1180 aa23.82■■□□□ 1.4
TMED3-204ENST00000543455 NIM1KQ8IY84 436 aa23.82■■□□□ 1.4
TMED3-204ENST00000543455 SUPT20HQ8NEM7 779 aa23.82■■□□□ 1.4
TMED3-204ENST00000543455 RPS8P62241 208 aaKnown RBP23.81■■□□□ 1.4
TMED3-204ENST00000543455 GPSM2P81274 684 aa23.81■■□□□ 1.4
TMED3-204ENST00000543455 NEXNQ0ZGT2 675 aa23.81■■□□□ 1.4
TMED3-204ENST00000543455 FKBP5Q13451 457 aaPredicted RBP23.81■■□□□ 1.4
TMED3-204ENST00000543455 CCDC85AQ96PX6 553 aaPredicted RBP23.81■■□□□ 1.4
TMED3-204ENST00000543455 HACL1Q9UJ83 578 aa23.81■■□□□ 1.4
TMED3-204ENST00000543455 H7C1W4 665 aa23.81■■□□□ 1.4
TMED3-204ENST00000543455 DNAAF4Q8WXU2 420 aa23.81■■□□□ 1.4
TMED3-204ENST00000543455 SCNN1DP51172 638 aa23.8■■□□□ 1.4
TMED3-204ENST00000543455 CASP7P55210 303 aa23.8■■□□□ 1.4
TMED3-204ENST00000543455 CCDC152Q4G0S7 254 aa23.8■■□□□ 1.4
TMED3-204ENST00000543455 CHADLQ6NUI6 762 aa23.8■■□□□ 1.4
TMED3-204ENST00000543455 POLLQ9UGP5 575 aa23.8■■□□□ 1.4
TMED3-204ENST00000543455 GJA3Q9Y6H8 435 aa23.8■■□□□ 1.4
TMED3-204ENST00000543455 HSP90B1P14625 803 aaKnown RBP23.79■■□□□ 1.4
TMED3-204ENST00000543455 EPHX2P34913 555 aa23.79■■□□□ 1.4
TMED3-204ENST00000543455 CTSWP56202 376 aa23.79■■□□□ 1.4
TMED3-204ENST00000543455 GCKRQ14397 625 aa23.79■■□□□ 1.4
TMED3-204ENST00000543455 SPEF2Q9C093 1822 aa23.79■■□□□ 1.4
TMED3-204ENST00000543455 YDJCA8MPS7 323 aa23.78■■□□□ 1.4
TMED3-204ENST00000543455 F6X3S4 739 aa23.78■■□□□ 1.4
TMED3-204ENST00000543455 CXCL9Q07325 125 aa23.78■■□□□ 1.4
TMED3-204ENST00000543455 UBE3BQ7Z3V4 1068 aa23.78■■□□□ 1.4
TMED3-204ENST00000543455 TTLL11Q8NHH1 800 aa23.78■■□□□ 1.4
TMED3-204ENST00000543455 ZNRF3Q9ULT6 936 aa23.78■■□□□ 1.4
TMED3-204ENST00000543455 NSFL1CQ9UNZ2 370 aaKnown RBP23.78■■□□□ 1.4
TMED3-204ENST00000543455 CCER2I3L3R5 266 aa23.77■■□□□ 1.4
TMED3-204ENST00000543455 LDHDQ86WU2 507 aa23.77■■□□□ 1.4
TMED3-204ENST00000543455 EPS15P42566 896 aa23.76■■□□□ 1.39
TMED3-204ENST00000543455 LINS1Q8NG48 757 aa23.76■■□□□ 1.39
TMED3-204ENST00000543455 GPR101Q96P66 508 aaPredicted RBP23.76■■□□□ 1.39
TMED3-204ENST00000543455 EAPPQ56P03 285 aaPredicted RBP23.75■■□□□ 1.39
TMED3-204ENST00000543455 GREM2Q9H772 168 aa23.75■■□□□ 1.39
TMED3-204ENST00000543455 BEND3Q5T5X7 828 aa23.75■■□□□ 1.39
TMED3-204ENST00000543455 TBC1D16Q8TBP0 767 aa23.75■■□□□ 1.39
TMED3-204ENST00000543455 PLA2G12BQ9BX93 195 aa23.75■■□□□ 1.39
TMED3-204ENST00000543455 PODXL2Q9NZ53 605 aa23.75■■□□□ 1.39
TMED3-204ENST00000543455 RTL9Q8NET4 1388 aa23.74■■□□□ 1.39
TMED3-204ENST00000543455 SCN9AQ15858 1988 aa23.74■■□□□ 1.39
TMED3-204ENST00000543455 SLFN5Q08AF3 891 aa23.74■■□□□ 1.39
TMED3-204ENST00000543455 PASKQ96RG2 1323 aa23.73■■□□□ 1.39
TMED3-204ENST00000543455 WASHC4Q2M389 1173 aa23.73■■□□□ 1.39
TMED3-204ENST00000543455 CDCA7LQ96GN5 454 aa23.73■■□□□ 1.39
TMED3-204ENST00000543455 E9PSI1 815 aa23.72■■□□□ 1.39
TMED3-204ENST00000543455 C6orf229H3BNL8 230 aa23.72■■□□□ 1.39
TMED3-204ENST00000543455 RIMBP2O15034 1052 aa23.72■■□□□ 1.39
TMED3-204ENST00000543455 RAD17O75943 681 aa23.72■■□□□ 1.39
TMED3-204ENST00000543455 ITGBL1O95965 494 aaPredicted RBP23.72■■□□□ 1.39
TMED3-204ENST00000543455 MIER1Q8N108 512 aa23.72■■□□□ 1.39
TMED3-204ENST00000543455 CIAPIN1Q6FI81 312 aa23.71■■□□□ 1.39
TMED3-204ENST00000543455 PNMA8AQ86V59 439 aaPredicted RBP23.71■■□□□ 1.39
TMED3-204ENST00000543455 ANKRD18AQ8IVF6 992 aa23.71■■□□□ 1.39
TMED3-204ENST00000543455 KLRG1Q96E93 195 aa23.71■■□□□ 1.39
TMED3-204ENST00000543455 DBNDD1Q9H9R9 158 aa23.71■■□□□ 1.39
TMED3-204ENST00000543455 WTIPA6NIX2 430 aaPredicted RBP23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms