RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 POLRMTO00411 1230 aaKnown RBP13.23□□□□□ -0.29
DDB1-221ENST00000543162 RAB11FIP3O75154 756 aa13.23□□□□□ -0.29
DDB1-221ENST00000543162 MMP10P09238 476 aa13.23□□□□□ -0.29
DDB1-221ENST00000543162 RFX5P48382 616 aaPredicted RBP13.23□□□□□ -0.29
DDB1-221ENST00000543162 ST5P78524 1137 aa13.23□□□□□ -0.29
DDB1-221ENST00000543162 NUCB1Q02818 461 aa13.23□□□□□ -0.29
DDB1-221ENST00000543162 IFIT5Q13325 482 aaKnown RBP13.23□□□□□ -0.29
DDB1-221ENST00000543162 OS9Q13438 667 aaPredicted RBP13.23□□□□□ -0.29
DDB1-221ENST00000543162 FAM161AQ3B820 660 aa13.23□□□□□ -0.29
DDB1-221ENST00000543162 CCDC152Q4G0S7 254 aa13.23□□□□□ -0.29
DDB1-221ENST00000543162 CCDC85AQ96PX6 553 aaPredicted RBP13.23□□□□□ -0.29
DDB1-221ENST00000543162 PA2G4Q9UQ80 394 aaKnown RBP13.23□□□□□ -0.29
DDB1-221ENST00000543162 NOP58Q9Y2X3 529 aaKnown RBP13.23□□□□□ -0.29
DDB1-221ENST00000543162 PTPN12Q05209 780 aaKnown RBP13.22□□□□□ -0.29
DDB1-221ENST00000543162 G3BP1Q13283 466 aaKnown RBP eCLIP13.22□□□□□ -0.296e-9■■■□□ 16.5
DDB1-221ENST00000543162 TAF7LQ5H9L4 462 aa13.22□□□□□ -0.29
DDB1-221ENST00000543162 PRR5LQ6MZQ0 368 aa13.22□□□□□ -0.29
DDB1-221ENST00000543162 CHD1LQ86WJ1 897 aa13.22□□□□□ -0.29
DDB1-221ENST00000543162 CCDC24Q8N4L8 307 aa13.22□□□□□ -0.29
DDB1-221ENST00000543162 KLHDC4Q8TBB5 520 aa13.22□□□□□ -0.29
DDB1-221ENST00000543162 SLC16A10Q8TF71 515 aa13.22□□□□□ -0.29
DDB1-221ENST00000543162 NLRP3Q96P20 1036 aa13.22□□□□□ -0.29
DDB1-221ENST00000543162 GREM2Q9H772 168 aa13.22□□□□□ -0.29
DDB1-221ENST00000543162 COPRSQ9NQ92 184 aa13.22□□□□□ -0.29
DDB1-221ENST00000543162 PARP3Q9Y6F1 533 aa13.22□□□□□ -0.29
DDB1-221ENST00000543162 ANKRD18BA2A2Z9 1011 aa13.21□□□□□ -0.29
DDB1-221ENST00000543162 ITGA6P23229 1130 aa13.21□□□□□ -0.29
DDB1-221ENST00000543162 SF3B3Q15393 1217 aaKnown RBP13.21□□□□□ -0.29
DDB1-221ENST00000543162 ERC1Q8IUD2 1116 aa13.21□□□□□ -0.29
DDB1-221ENST00000543162 LRRCC1Q9C099 1032 aa13.21□□□□□ -0.29
DDB1-221ENST00000543162 PDGFDQ9GZP0 370 aaPredicted RBP13.21□□□□□ -0.29
DDB1-221ENST00000543162 SIL1Q9H173 461 aa13.21□□□□□ -0.29
DDB1-221ENST00000543162 RTL9Q8NET4 1388 aa13.2□□□□□ -0.3
DDB1-221ENST00000543162 C3orf67Q6ZVT6 689 aa13.2□□□□□ -0.3
DDB1-221ENST00000543162 KIF1BPQ96EK5 621 aa13.2□□□□□ -0.3
DDB1-221ENST00000543162 ZNF594Q96JF6 807 aaPredicted RBP13.2□□□□□ -0.3
DDB1-221ENST00000543162 LNPKQ9C0E8 428 aa13.2□□□□□ -0.3
DDB1-221ENST00000543162 RIC1Q4ADV7 1423 aa13.2□□□□□ -0.3
DDB1-221ENST00000543162 SMARCA5O60264 1052 aaPredicted RBP13.19□□□□□ -0.3
DDB1-221ENST00000543162 R3HDM1Q15032 1099 aaKnown RBP13.19□□□□□ -0.3
DDB1-221ENST00000543162 SKAP1Q86WV1 359 aa13.19□□□□□ -0.3
DDB1-221ENST00000543162 RHPN1Q8TCX5 695 aa13.19□□□□□ -0.3
DDB1-221ENST00000543162 BCL11AQ9H165 835 aa13.19□□□□□ -0.3
DDB1-221ENST00000543162 NRXN2Q9P2S2 1712 aa13.19□□□□□ -0.3
DDB1-221ENST00000543162 EYA2O00167 538 aa13.18□□□□□ -0.3
DDB1-221ENST00000543162 CIAO1O76071 339 aa13.18□□□□□ -0.3
DDB1-221ENST00000543162 CDC5LQ99459 802 aaKnown RBP13.18□□□□□ -0.3
DDB1-221ENST00000543162 SEC31BQ9NQW1 1179 aa13.18□□□□□ -0.3
DDB1-221ENST00000543162 FBXO3Q9UK99 471 aa13.18□□□□□ -0.3
DDB1-221ENST00000543162 TNRC6CQ9HCJ0 1690 aaKnown RBP13.18□□□□□ -0.3
DDB1-221ENST00000543162 CASZ1Q86V15 1759 aa13.17□□□□□ -0.3
DDB1-221ENST00000543162 IL15P40933 162 aaPredicted RBP13.17□□□□□ -0.3
DDB1-221ENST00000543162 RGS3P49796 1198 aa13.17□□□□□ -0.3
DDB1-221ENST00000543162 LDHAL6AQ6ZMR3 332 aa13.17□□□□□ -0.3
DDB1-221ENST00000543162 BRIP1Q9BX63 1249 aa13.17□□□□□ -0.3
DDB1-221ENST00000543162 IL1RAPL2Q9NP60 686 aa13.17□□□□□ -0.3
DDB1-221ENST00000543162 SASH1O94885 1247 aa13.16□□□□□ -0.3
DDB1-221ENST00000543162 PDE4AP27815 886 aa13.16□□□□□ -0.3
DDB1-221ENST00000543162 IGHMBP2P38935 993 aaKnown RBP13.16□□□□□ -0.3
DDB1-221ENST00000543162 LRRC24Q50LG9 513 aa13.16□□□□□ -0.3
DDB1-221ENST00000543162 DDX46Q7L014 1031 aaKnown RBP13.16□□□□□ -0.3
DDB1-221ENST00000543162 ATG9AQ7Z3C6 839 aa13.16□□□□□ -0.3
DDB1-221ENST00000543162 RPGRQ92834 1020 aaKnown RBP13.16□□□□□ -0.3
DDB1-221ENST00000543162 MPHOSPH8Q99549 860 aa13.16□□□□□ -0.3
DDB1-221ENST00000543162 PUS3Q9BZE2 481 aaKnown RBP13.16□□□□□ -0.3
DDB1-221ENST00000543162 CNNM1Q9NRU3 951 aa13.16□□□□□ -0.3
DDB1-221ENST00000543162 PSDA5PKW4 1024 aaPredicted RBP13.15□□□□□ -0.3
DDB1-221ENST00000543162 ZBTB7AO95365 584 aa13.15□□□□□ -0.3
DDB1-221ENST00000543162 TFCP2Q12800 502 aa13.15□□□□□ -0.3
DDB1-221ENST00000543162 CRY2Q49AN0 593 aa13.15□□□□□ -0.3
DDB1-221ENST00000543162 ANKRD18AQ8IVF6 992 aa13.15□□□□□ -0.3
DDB1-221ENST00000543162 PELP1Q8IZL8 1130 aaKnown RBP13.15□□□□□ -0.3
DDB1-221ENST00000543162 CLASRPQ8N2M8 674 aaKnown RBP13.15□□□□□ -0.3
DDB1-221ENST00000543162 MTFR1LQ9H019 292 aa13.15□□□□□ -0.3
DDB1-221ENST00000543162 LRP5O75197 1615 aa13.14□□□□□ -0.31
DDB1-221ENST00000543162 KLRG2A4D1S0 409 aaPredicted RBP13.14□□□□□ -0.31
DDB1-221ENST00000543162 PDE6BP35913 854 aa13.14□□□□□ -0.31
DDB1-221ENST00000543162 C16orf71Q8IYS4 520 aaPredicted RBP13.14□□□□□ -0.31
DDB1-221ENST00000543162 RBM17Q96I25 401 aaKnown RBP13.14□□□□□ -0.31
DDB1-221ENST00000543162 CEP126Q9P2H0 1117 aa13.14□□□□□ -0.31
DDB1-221ENST00000543162 RIPOR2Q9Y4F9 1068 aa13.14□□□□□ -0.31
DDB1-221ENST00000543162 ANKRD31Q8N7Z5 1873 aa13.14□□□□□ -0.31
DDB1-221ENST00000543162 POLD1P28340 1107 aa13.13□□□□□ -0.31
DDB1-221ENST00000543162 RPS8P62241 208 aaKnown RBP13.13□□□□□ -0.31
DDB1-221ENST00000543162 METTL24Q5JXM2 366 aa13.13□□□□□ -0.31
DDB1-221ENST00000543162 AACSQ86V21 672 aa13.13□□□□□ -0.31
DDB1-221ENST00000543162 CELF1Q92879 486 aaKnown RBP13.13□□□□□ -0.31
DDB1-221ENST00000543162 ATF5Q9Y2D1 282 aaPredicted RBP13.13□□□□□ -0.31
DDB1-221ENST00000543162 SPEF2Q9C093 1822 aa13.13□□□□□ -0.31
DDB1-221ENST00000543162 MROH5Q6ZUA9 1318 aa13.13□□□□□ -0.31
DDB1-221ENST00000543162 TAF1P21675 1872 aa13.12□□□□□ -0.31
DDB1-221ENST00000543162 IFIT2P09913 472 aaKnown RBP13.12□□□□□ -0.31
DDB1-221ENST00000543162 HOXA10P31260 410 aaPredicted RBP13.12□□□□□ -0.31
DDB1-221ENST00000543162 GRAPQ13588 217 aa13.12□□□□□ -0.31
DDB1-221ENST00000543162 TNNI3KQ59H18 835 aa13.12□□□□□ -0.31
DDB1-221ENST00000543162 PLEKHM2Q8IWE5 1019 aa13.12□□□□□ -0.31
DDB1-221ENST00000543162 GRAPLQ8TC17 118 aaPredicted RBP13.12□□□□□ -0.31
DDB1-221ENST00000543162 OTUD7AQ8TE49 926 aaPredicted RBP13.12□□□□□ -0.31
DDB1-221ENST00000543162 GPR108Q9NPR9 543 aa13.12□□□□□ -0.31
DDB1-221ENST00000543162 BSDC1Q9NW68 430 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms