RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 OS9Q13438 667 aaPredicted RBP16.39■□□□□ 0.21
CHFR-221ENST00000542714 C8orf34Q49A92 452 aa16.39■□□□□ 0.21
CHFR-221ENST00000542714 NUTM1Q86Y26 1132 aa16.39■□□□□ 0.21
CHFR-221ENST00000542714 ERC1Q8IUD2 1116 aa16.39■□□□□ 0.21
CHFR-221ENST00000542714 BCL11AQ9H165 835 aa16.39■□□□□ 0.21
CHFR-221ENST00000542714 TAF1P21675 1872 aa16.38■□□□□ 0.21
CHFR-221ENST00000542714 GYS1P13807 737 aa16.38■□□□□ 0.21
CHFR-221ENST00000542714 NFIXQ14938 502 aa16.38■□□□□ 0.21
CHFR-221ENST00000542714 ERFEQ4G0M1 354 aa16.38■□□□□ 0.21
CHFR-221ENST00000542714 ATG9AQ7Z3C6 839 aa16.38■□□□□ 0.21
CHFR-221ENST00000542714 ZNF594Q96JF6 807 aaPredicted RBP16.38■□□□□ 0.21
CHFR-221ENST00000542714 CCDC85AQ96PX6 553 aaPredicted RBP16.38■□□□□ 0.21
CHFR-221ENST00000542714 GREM2Q9H772 168 aa16.38■□□□□ 0.21
CHFR-221ENST00000542714 A0A1B0GUL6 1792 aa16.38■□□□□ 0.21
CHFR-221ENST00000542714 SETDB2Q96T68 719 aa16.37■□□□□ 0.21
CHFR-221ENST00000542714 BACH2Q9BYV9 841 aa16.37■□□□□ 0.21
CHFR-221ENST00000542714 ANO8Q9HCE9 1232 aaPredicted RBP16.37■□□□□ 0.21
CHFR-221ENST00000542714 CARMIL3Q8ND23 1372 aa16.37■□□□□ 0.21
CHFR-221ENST00000542714 NRXN2Q9P2S2 1712 aa16.36■□□□□ 0.21
CHFR-221ENST00000542714 GSPT1P15170 499 aaKnown RBP16.36■□□□□ 0.21
CHFR-221ENST00000542714 PDE1AP54750 535 aa16.36■□□□□ 0.21
CHFR-221ENST00000542714 TTC22Q5TAA0 569 aa16.36■□□□□ 0.21
CHFR-221ENST00000542714 C3orf67Q6ZVT6 689 aa16.36■□□□□ 0.21
CHFR-221ENST00000542714 COL23A1Q86Y22 540 aaPredicted RBP16.36■□□□□ 0.21
CHFR-221ENST00000542714 PUS3Q9BZE2 481 aaKnown RBP16.36■□□□□ 0.21
CHFR-221ENST00000542714 OSBPL3Q9H4L5 887 aa16.36■□□□□ 0.21
CHFR-221ENST00000542714 TFCP2L1Q9NZI6 479 aa16.36■□□□□ 0.21
CHFR-221ENST00000542714 STAP2Q9UGK3 403 aa16.36■□□□□ 0.21
CHFR-221ENST00000542714 AK9Q5TCS8 1911 aa16.36■□□□□ 0.21
CHFR-221ENST00000542714 PNPLA7Q6ZV29 1317 aa16.36■□□□□ 0.21
CHFR-221ENST00000542714 RTL9Q8NET4 1388 aa16.36■□□□□ 0.21
CHFR-221ENST00000542714 RIC1Q4ADV7 1423 aa16.36■□□□□ 0.21
CHFR-221ENST00000542714 EYA2O00167 538 aa16.35■□□□□ 0.21
CHFR-221ENST00000542714 CIAO1O76071 339 aa16.35■□□□□ 0.21
CHFR-221ENST00000542714 MX1P20591 662 aa16.35■□□□□ 0.21
CHFR-221ENST00000542714 ITGA6P23229 1130 aa16.35■□□□□ 0.21
CHFR-221ENST00000542714 IFIT5Q13325 482 aaKnown RBP16.35■□□□□ 0.21
CHFR-221ENST00000542714 CCDC57Q2TAC2 916 aa16.35■□□□□ 0.21
CHFR-221ENST00000542714 LRRC24Q50LG9 513 aa16.35■□□□□ 0.21
CHFR-221ENST00000542714 BMP2KLQ5H9B9 411 aa16.35■□□□□ 0.21
CHFR-221ENST00000542714 SLC10A5Q5PT55 438 aa16.35■□□□□ 0.21
CHFR-221ENST00000542714 NYXQ9GZU5 481 aa16.35■□□□□ 0.21
CHFR-221ENST00000542714 TM4SF1P30408 202 aa16.34■□□□□ 0.21
CHFR-221ENST00000542714 TFCP2Q12800 502 aa16.34■□□□□ 0.21
CHFR-221ENST00000542714 TSHZ3Q63HK5 1081 aa16.34■□□□□ 0.21
CHFR-221ENST00000542714 NBPF5PQ86XG9 351 aaPredicted RBP16.34■□□□□ 0.21
CHFR-221ENST00000542714 ANKRD31Q8N7Z5 1873 aa16.33■□□□□ 0.21
CHFR-221ENST00000542714 ANKRD18BA2A2Z9 1011 aa16.33■□□□□ 0.2
CHFR-221ENST00000542714 BAG6P46379 1132 aa16.33■□□□□ 0.2
CHFR-221ENST00000542714 DEFB132Q7Z7B7 95 aa16.33■□□□□ 0.2
CHFR-221ENST00000542714 EAF2Q96CJ1 260 aaPredicted RBP16.33■□□□□ 0.2
CHFR-221ENST00000542714 AOX1Q06278 1338 aa16.33■□□□□ 0.2
CHFR-221ENST00000542714 ZNF609O15014 1411 aa16.33■□□□□ 0.2
CHFR-221ENST00000542714 ARAP2Q8WZ64 1704 aa16.33■□□□□ 0.2
CHFR-221ENST00000542714 HSP90B1P14625 803 aaKnown RBP16.32■□□□□ 0.2
CHFR-221ENST00000542714 IL15P40933 162 aaPredicted RBP16.32■□□□□ 0.2
CHFR-221ENST00000542714 DDR1Q08345 913 aa16.32■□□□□ 0.2
CHFR-221ENST00000542714 SF3B3Q15393 1217 aaKnown RBP16.32■□□□□ 0.2
CHFR-221ENST00000542714 AACSQ86V21 672 aa16.32■□□□□ 0.2
CHFR-221ENST00000542714 CLASRPQ8N2M8 674 aaKnown RBP16.32■□□□□ 0.2
CHFR-221ENST00000542714 CCDC24Q8N4L8 307 aa16.32■□□□□ 0.2
CHFR-221ENST00000542714 FLAD1Q8NFF5 587 aa16.32■□□□□ 0.2
CHFR-221ENST00000542714 TLR7Q9NYK1 1049 aaKnown RBP16.32■□□□□ 0.2
CHFR-221ENST00000542714 FBXO3Q9UK99 471 aa16.32■□□□□ 0.2
CHFR-221ENST00000542714 SF3B2Q13435 895 aaKnown RBP16.31■□□□□ 0.2
CHFR-221ENST00000542714 CCDC152Q4G0S7 254 aa16.31■□□□□ 0.2
CHFR-221ENST00000542714 PI4K2BQ8TCG2 481 aa16.31■□□□□ 0.2
CHFR-221ENST00000542714 SEC31BQ9NQW1 1179 aa16.31■□□□□ 0.2
CHFR-221ENST00000542714 RIPOR2Q9Y4F9 1068 aa16.31■□□□□ 0.2
CHFR-221ENST00000542714 POLRMTO00411 1230 aaKnown RBP16.3■□□□□ 0.2
CHFR-221ENST00000542714 SLC15A2Q16348 729 aa16.3■□□□□ 0.2
CHFR-221ENST00000542714 TNNI3KQ59H18 835 aa16.3■□□□□ 0.2
CHFR-221ENST00000542714 TAF7LQ5H9L4 462 aa16.3■□□□□ 0.2
CHFR-221ENST00000542714 PRR5LQ6MZQ0 368 aa16.3■□□□□ 0.2
CHFR-221ENST00000542714 TPTE2Q6XPS3 522 aa16.3■□□□□ 0.2
CHFR-221ENST00000542714 CCDC8Q9H0W5 538 aaPredicted RBP16.3■□□□□ 0.2
CHFR-221ENST00000542714 GPR108Q9NPR9 543 aa16.3■□□□□ 0.2
CHFR-221ENST00000542714 FPGT-TNNI3KV9GXZ4 949 aa16.3■□□□□ 0.2
CHFR-221ENST00000542714 SERPINB2P05120 415 aa16.29■□□□□ 0.2
CHFR-221ENST00000542714 IFIT2P09913 472 aaKnown RBP16.29■□□□□ 0.2
CHFR-221ENST00000542714 GTF2E1P29083 439 aaPredicted RBP16.29■□□□□ 0.2
CHFR-221ENST00000542714 CNBD1Q8NA66 436 aa16.29■□□□□ 0.2
CHFR-221ENST00000542714 STK32BQ9NY57 414 aa16.29■□□□□ 0.2
CHFR-221ENST00000542714 TTC41PQ6P2S7 1318 aa16.28■□□□□ 0.2
CHFR-221ENST00000542714 SDSP20132 328 aa16.28■□□□□ 0.2
CHFR-221ENST00000542714 DBNLQ9UJU6 430 aaKnown RBP16.28■□□□□ 0.2
CHFR-221ENST00000542714 MSH5O43196 834 aa16.27■□□□□ 0.2
CHFR-221ENST00000542714 SEC24BO95487 1268 aa16.27■□□□□ 0.2
CHFR-221ENST00000542714 LDHAL6AQ6ZMR3 332 aa16.27■□□□□ 0.2
CHFR-221ENST00000542714 VGLL2Q8N8G2 317 aa16.27■□□□□ 0.2
CHFR-221ENST00000542714 ECHDC1Q9NTX5 307 aa16.27■□□□□ 0.2
CHFR-221ENST00000542714 COL11A2P13942 1736 aaPredicted RBP16.26■□□□□ 0.19
CHFR-221ENST00000542714 CCDC125Q86Z20 511 aa16.26■□□□□ 0.19
CHFR-221ENST00000542714 NLGN1Q8N2Q7 840 aa16.26■□□□□ 0.19
CHFR-221ENST00000542714 DBNDD2Q9BQY9 259 aa16.26■□□□□ 0.19
CHFR-221ENST00000542714 CNNM1Q9NRU3 951 aa16.26■□□□□ 0.19
CHFR-221ENST00000542714 CEP126Q9P2H0 1117 aa16.26■□□□□ 0.19
CHFR-221ENST00000542714 RBM19Q9Y4C8 960 aaKnown RBP16.26■□□□□ 0.19
CHFR-221ENST00000542714 METTL24Q5JXM2 366 aa16.25■□□□□ 0.19
CHFR-221ENST00000542714 NLRP3Q96P20 1036 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms