RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 MAP3K15Q6ZN16 1313 aa15.47■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 ZBTB7BO15156 539 aaPredicted RBP15.47■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 RPS6KA4O75676 772 aa15.47■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 BEGAINQ9BUH8 593 aa15.47■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 HDAC5Q9UQL6 1122 aa15.47■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 NUP98P52948 1817 aa15.46■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 GNAI3P08754 354 aa15.46■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 RFC4P35249 363 aa15.46■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 PIP4K2AP48426 406 aaPredicted RBP15.46■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 DGKZQ13574 1117 aa15.46■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 ZBTB40Q9NUA8 1239 aa15.46■□□□□ 0.07
CACNA1C-IT3-201ENST00000542680 NRXN2Q9P2S2 1712 aa15.46■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 SOX10P56693 466 aa15.45■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 TTLL7Q6ZT98 887 aa15.45■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 DZIP3Q86Y13 1208 aaKnown RBP15.45■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 A0A0C4DFX4 3053 aa15.45■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 DDNO94850 711 aaPredicted RBP15.44■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 TRIM28Q13263 835 aaKnown RBP15.44■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 ERFEQ4G0M1 354 aa15.44■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 GIGYF2Q6Y7W6 1299 aaKnown RBP15.44■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 TAF1DQ9H5J8 278 aaPredicted RBP15.44■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 UTYO14607 1347 aa15.43■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 CLEC4GQ6UXB4 293 aa15.43■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 CAPNS2Q96L46 248 aa15.43■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 ZNF652Q9Y2D9 606 aa15.43■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 ZNF330Q9Y3S2 320 aaPredicted RBP15.43■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 IQCA1LA6NCM1 817 aa15.42■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 NEURL1BA8MQ27 555 aa15.42■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 TCIRG1Q13488 830 aa15.42■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 CCDC191Q8NCU4 936 aa15.42■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 GCC1Q96CN9 775 aa15.42■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 MYD88Q99836 296 aa15.42■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 ZBTB3Q9H5J0 574 aa15.42■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 ABT1Q9ULW3 272 aaKnown RBP15.42■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 POLRMTO00411 1230 aaKnown RBP15.41■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 CAMTA2O94983 1202 aa15.41■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 IGKV5-2P06315 115 aa15.41■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 TTLL6Q8N841 843 aa15.41■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 L3MBTL3Q96JM7 780 aaPredicted RBP15.41■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 CCDC136Q96JN2 1154 aa15.41■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 GPR101Q96P66 508 aaPredicted RBP15.41■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 MEIS3Q99687 375 aa15.41■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 ISCA1Q9BUE6 129 aa15.41■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 USP44Q9H0E7 712 aa15.41■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 TRPM7Q96QT4 1865 aa15.41■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 GRM8O00222 908 aa15.4■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 GNAI2P04899 355 aa15.4■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 UBTFL1P0CB47 393 aaPredicted RBP15.4■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 GCKRQ14397 625 aa15.4■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 HABP4Q5JVS0 413 aaKnown RBP15.4■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 CWC25Q9NXE8 425 aaPredicted RBP15.4■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 SRP68Q9UHB9 627 aaKnown RBP15.4■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 NARFQ9UHQ1 456 aa15.4■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 USP42Q9H9J4 1324 aaKnown RBP15.4■□□□□ 0.06
CACNA1C-IT3-201ENST00000542680 CA12O43570 354 aa15.39■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 ECE1P42892 770 aa15.39■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 CWF19L2Q2TBE0 894 aaKnown RBP15.39■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 RPAP2Q8IXW5 612 aaPredicted RBP15.39■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 C9orf78Q9NZ63 289 aaPredicted RBP15.39■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 ZNF219Q9P2Y4 722 aaPredicted RBP15.39■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 SZT2Q5T011 3432 aa15.39■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 TM4SF1P30408 202 aa15.38■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 HDAC1Q13547 482 aaPredicted RBP15.38■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 PARP10Q53GL7 1025 aa15.38■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 CYP4F22Q6NT55 531 aa15.38■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 TBC1D2BQ9UPU7 963 aa15.38■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 ZPR1O75312 459 aa15.37■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 ZNF34Q8IZ26 560 aa15.37■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 CNTROBQ8N137 903 aa15.37■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 MAP2K2P36507 400 aa15.36■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 HLFQ16534 295 aa15.36■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 EAPPQ56P03 285 aaPredicted RBP15.36■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 CENPQQ7L2Z9 268 aaPredicted RBP15.36■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 ANKRD44Q8N8A2 993 aa15.36■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 RWDD1Q9H446 243 aaPredicted RBP15.36■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 PCDHB15Q9Y5E8 787 aa15.36■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 MKI67P46013 3256 aaKnown RBP15.36■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 LTBP3Q9NS15 1303 aa15.36■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 LAMB2P55268 1798 aa15.36■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 COL11A2P13942 1736 aaPredicted RBP15.35■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 ATP5J2-PTCD1G3V325 749 aa15.35■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 H7C1W4 665 aa15.35■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 AOC2O75106 756 aa15.35■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 HMMRO75330 724 aa15.35■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 PCCAP05165 728 aaPredicted RBP15.35■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 NBPF7P0C2Y1 421 aaPredicted RBP15.35■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 MTX1Q13505 466 aa15.35■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 MAP1SQ66K74 1059 aaPredicted RBP15.35■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 NLRP10Q86W26 655 aa15.35■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 CDHR2Q9BYE9 1310 aa15.35■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 ANKRD31Q8N7Z5 1873 aa15.35■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 HSP90B1P14625 803 aaKnown RBP15.34■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 GRM1Q13255 1194 aa15.34■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 B4GALNT3Q6L9W6 998 aa15.34■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 CEP85Q6P2H3 762 aa15.34■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 PAXIP1Q6ZW49 1069 aaPredicted RBP15.34■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 ZBTB38Q8NAP3 1195 aaPredicted RBP15.34■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 CLEC11AQ9Y240 323 aa15.34■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 CACNA1SQ13698 1873 aa15.33■□□□□ 0.05
CACNA1C-IT3-201ENST00000542680 MYH3P11055 1940 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms