RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 ABCC4O15439 1325 aa17.94■□□□□ 0.46
DDX11-221ENST00000542661 GRM8O00222 908 aa17.93■□□□□ 0.46
DDX11-221ENST00000542661 PPEF1O14829 653 aaPredicted RBP17.93■□□□□ 0.46
DDX11-221ENST00000542661 GRAPQ13588 217 aa17.93■□□□□ 0.46
DDX11-221ENST00000542661 GRAPLQ8TC17 118 aaPredicted RBP17.93■□□□□ 0.46
DDX11-221ENST00000542661 PLA2G12BQ9BX93 195 aa17.93■□□□□ 0.46
DDX11-221ENST00000542661 CCT4P50991 539 aaKnown RBP17.92■□□□□ 0.46
DDX11-221ENST00000542661 CASP7P55210 303 aa17.92■□□□□ 0.46
DDX11-221ENST00000542661 CTSWP56202 376 aa17.92■□□□□ 0.46
DDX11-221ENST00000542661 LTBP3Q9NS15 1303 aa17.92■□□□□ 0.46
DDX11-221ENST00000542661 NFKBIEO00221 500 aa17.91■□□□□ 0.46
DDX11-221ENST00000542661 BCAR3O75815 825 aa17.91■□□□□ 0.46
DDX11-221ENST00000542661 TAOK3Q9H2K8 898 aa17.91■□□□□ 0.46
DDX11-221ENST00000542661 ATP6V0A2Q9Y487 856 aa17.91■□□□□ 0.46
DDX11-221ENST00000542661 MYH3P11055 1940 aa17.91■□□□□ 0.46
DDX11-221ENST00000542661 FER1L6Q2WGJ9 1857 aa17.9■□□□□ 0.46
DDX11-221ENST00000542661 LMNB1P20700 586 aa17.9■□□□□ 0.46
DDX11-221ENST00000542661 TTLL11Q8NHH1 800 aa17.9■□□□□ 0.46
DDX11-221ENST00000542661 RTL9Q8NET4 1388 aa17.9■□□□□ 0.46
DDX11-221ENST00000542661 RPS8P62241 208 aaKnown RBP17.89■□□□□ 0.45
DDX11-221ENST00000542661 C9orf131Q5VYM1 1079 aa17.89■□□□□ 0.45
DDX11-221ENST00000542661 SP8Q8IXZ3 490 aa17.89■□□□□ 0.45
DDX11-221ENST00000542661 FRAT1Q92837 279 aaPredicted RBP17.89■□□□□ 0.45
DDX11-221ENST00000542661 UTYO14607 1347 aa17.89■□□□□ 0.45
DDX11-221ENST00000542661 FKBP4Q02790 459 aaKnown RBP eCLIP17.88■□□□□ 0.45
DDX11-221ENST00000542661 RASSF7Q02833 373 aa17.88■□□□□ 0.45
DDX11-221ENST00000542661 ATF7IPQ6VMQ6 1270 aa17.88■□□□□ 0.45
DDX11-221ENST00000542661 ZNF784Q8NCA9 323 aaPredicted RBP17.88■□□□□ 0.45
DDX11-221ENST00000542661 CDC5LQ99459 802 aaKnown RBP17.88■□□□□ 0.45
DDX11-221ENST00000542661 PSMD1Q99460 953 aa17.88■□□□□ 0.45
DDX11-221ENST00000542661 SBF1O95248 1867 aa17.88■□□□□ 0.45
DDX11-221ENST00000542661 CSF1RP07333 972 aa17.87■□□□□ 0.45
DDX11-221ENST00000542661 ZKSCAN2Q63HK3 967 aa17.87■□□□□ 0.45
DDX11-221ENST00000542661 OLFM4Q6UX06 510 aa17.87■□□□□ 0.45
DDX11-221ENST00000542661 CELF1Q92879 486 aaKnown RBP17.87■□□□□ 0.45
DDX11-221ENST00000542661 RNF181Q9P0P0 153 aa17.87■□□□□ 0.45
DDX11-221ENST00000542661 TAF1P21675 1872 aa17.86■□□□□ 0.45
DDX11-221ENST00000542661 TRIM27P14373 513 aa17.86■□□□□ 0.45
DDX11-221ENST00000542661 INTS3Q68E01 1043 aaKnown RBP17.86■□□□□ 0.45
DDX11-221ENST00000542661 ANKRD18AQ8IVF6 992 aa17.86■□□□□ 0.45
DDX11-221ENST00000542661 YTHDC1Q96MU7 727 aaKnown RBP17.86■□□□□ 0.45
DDX11-221ENST00000542661 CCDC85AQ96PX6 553 aaPredicted RBP17.86■□□□□ 0.45
DDX11-221ENST00000542661 GREM2Q9H772 168 aa17.86■□□□□ 0.45
DDX11-221ENST00000542661 SEC31BQ9NQW1 1179 aa17.86■□□□□ 0.45
DDX11-221ENST00000542661 HDAC5Q9UQL6 1122 aa17.86■□□□□ 0.45
DDX11-221ENST00000542661 ZC3H4Q9UPT8 1303 aaKnown RBP17.86■□□□□ 0.45
DDX11-221ENST00000542661 NBPF7P0C2Y1 421 aaPredicted RBP17.85■□□□□ 0.45
DDX11-221ENST00000542661 FOXO4P98177 505 aa17.85■□□□□ 0.45
DDX11-221ENST00000542661 SNED1Q8TER0 1413 aa17.85■□□□□ 0.45
DDX11-221ENST00000542661 USP44Q9H0E7 712 aa17.85■□□□□ 0.45
DDX11-221ENST00000542661 DPP8Q6V1X1 898 aaPredicted RBP17.84■□□□□ 0.45
DDX11-221ENST00000542661 MPNDQ8N594 471 aa17.84■□□□□ 0.45
DDX11-221ENST00000542661 SUPT20HQ8NEM7 779 aa17.84■□□□□ 0.45
DDX11-221ENST00000542661 RCAN3Q9UKA8 241 aa17.84■□□□□ 0.45
DDX11-221ENST00000542661 CCDC88AQ3V6T2 1871 aa17.84■□□□□ 0.45
DDX11-221ENST00000542661 ANKRD18BA2A2Z9 1011 aa17.83■□□□□ 0.44
DDX11-221ENST00000542661 ITGA6P23229 1130 aa17.83■□□□□ 0.44
DDX11-221ENST00000542661 IFIT5Q13325 482 aaKnown RBP17.83■□□□□ 0.44
DDX11-221ENST00000542661 FAM161AQ3B820 660 aa17.83■□□□□ 0.44
DDX11-221ENST00000542661 LMBR1LQ6UX01 489 aa17.83■□□□□ 0.44
DDX11-221ENST00000542661 VPS33BQ9H267 617 aa17.83■□□□□ 0.44
DDX11-221ENST00000542661 LRRC37AA6NMS7 1700 aa17.83■□□□□ 0.44
DDX11-221ENST00000542661 UBTFL1P0CB47 393 aaPredicted RBP17.82■□□□□ 0.44
DDX11-221ENST00000542661 MS4A1P11836 297 aa17.82■□□□□ 0.44
DDX11-221ENST00000542661 IGHMBP2P38935 993 aaKnown RBP17.82■□□□□ 0.44
DDX11-221ENST00000542661 PRELPP51888 382 aa17.82■□□□□ 0.44
DDX11-221ENST00000542661 CCDC57Q2TAC2 916 aa17.82■□□□□ 0.44
DDX11-221ENST00000542661 FTSJ3Q8IY81 847 aaKnown RBP17.82■□□□□ 0.44
DDX11-221ENST00000542661 SUCLG2Q96I99 432 aa17.82■□□□□ 0.44
DDX11-221ENST00000542661 RTFDC1Q9BY42 306 aaPredicted RBP17.82■□□□□ 0.44
DDX11-221ENST00000542661 ZNF277Q9NRM2 450 aaPredicted RBP17.82■□□□□ 0.44
DDX11-221ENST00000542661 BSDC1Q9NW68 430 aaPredicted RBP17.82■□□□□ 0.44
DDX11-221ENST00000542661 CHMP3Q9Y3E7 222 aa17.82■□□□□ 0.44
DDX11-221ENST00000542661 DICER1Q9UPY3 1922 aaKnown RBP17.82■□□□□ 0.44
DDX11-221ENST00000542661 GNAI3P08754 354 aa17.81■□□□□ 0.44
DDX11-221ENST00000542661 IARSP41252 1262 aaKnown RBP17.81■□□□□ 0.44
DDX11-221ENST00000542661 EPHA10Q5JZY3 1008 aa17.81■□□□□ 0.44
DDX11-221ENST00000542661 CLUAP1Q96AJ1 413 aa17.81■□□□□ 0.44
DDX11-221ENST00000542661 MPHOSPH8Q99549 860 aa17.81■□□□□ 0.44
DDX11-221ENST00000542661 NSFL1CQ9UNZ2 370 aaKnown RBP17.81■□□□□ 0.44
DDX11-221ENST00000542661 RABL6Q3YEC7 729 aaPredicted RBP17.8■□□□□ 0.44
DDX11-221ENST00000542661 DZIP1LQ8IYY4 767 aaKnown RBP17.8■□□□□ 0.44
DDX11-221ENST00000542661 KAZALD1Q96I82 304 aa17.8■□□□□ 0.44
DDX11-221ENST00000542661 BICC1Q9H694 974 aaKnown RBP17.8■□□□□ 0.44
DDX11-221ENST00000542661 TAF7LQ5H9L4 462 aa17.79■□□□□ 0.44
DDX11-221ENST00000542661 JDP2Q8WYK2 163 aa17.79■□□□□ 0.44
DDX11-221ENST00000542661 PODXL2Q9NZ53 605 aa17.79■□□□□ 0.44
DDX11-221ENST00000542661 ANKIB1Q9P2G1 1089 aa17.79■□□□□ 0.44
DDX11-221ENST00000542661 COL4A1P02462 1669 aa17.79■□□□□ 0.44
DDX11-221ENST00000542661 XDHP47989 1333 aa17.78■□□□□ 0.44
DDX11-221ENST00000542661 GPSM2P81274 684 aa17.78■□□□□ 0.44
DDX11-221ENST00000542661 SLC51AQ86UW1 340 aa17.78■□□□□ 0.44
DDX11-221ENST00000542661 LARGE2Q8N3Y3 721 aa17.78■□□□□ 0.44
DDX11-221ENST00000542661 TIAM2Q8IVF5 1701 aa17.78■□□□□ 0.44
DDX11-221ENST00000542661 KDM2BQ8NHM5 1336 aa17.77■□□□□ 0.44
DDX11-221ENST00000542661 PPIP5K2O43314 1243 aa17.77■□□□□ 0.44
DDX11-221ENST00000542661 DPY19L2Q6NUT2 758 aa17.77■□□□□ 0.44
DDX11-221ENST00000542661 TMEM57Q8N5G2 664 aa17.77■□□□□ 0.44
DDX11-221ENST00000542661 ANKRD44Q8N8A2 993 aa17.77■□□□□ 0.44
DDX11-221ENST00000542661 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms