RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 UTP14AQ9BVJ6 771 aaKnown RBP13.49□□□□□ -0.25
SCG3-202ENST00000542355 C22orf23Q9BZE7 217 aa13.49□□□□□ -0.25
SCG3-202ENST00000542355 MAP4K4O95819 1239 aaPredicted RBP13.48□□□□□ -0.25
SCG3-202ENST00000542355 CASC1Q6TDU7 716 aa13.48□□□□□ -0.25
SCG3-202ENST00000542355 LRRC4BQ9NT99 713 aa13.48□□□□□ -0.25
SCG3-202ENST00000542355 ECHDC1Q9NTX5 307 aa13.48□□□□□ -0.25
SCG3-202ENST00000542355 RTCBQ9Y3I0 505 aaKnown RBP13.48□□□□□ -0.25
SCG3-202ENST00000542355 BTAF1O14981 1849 aa13.48□□□□□ -0.25
SCG3-202ENST00000542355 MYH14Q7Z406 1995 aaKnown RBP13.48□□□□□ -0.25
SCG3-202ENST00000542355 MSH5O43196 834 aa13.48□□□□□ -0.25
SCG3-202ENST00000542355 RXRBP28702 533 aa13.48□□□□□ -0.25
SCG3-202ENST00000542355 IFIT5Q13325 482 aaKnown RBP13.48□□□□□ -0.25
SCG3-202ENST00000542355 LRRC24Q50LG9 513 aa13.48□□□□□ -0.25
SCG3-202ENST00000542355 PARP10Q53GL7 1025 aa13.48□□□□□ -0.25
SCG3-202ENST00000542355 CLEC4GQ6UXB4 293 aa13.48□□□□□ -0.25
SCG3-202ENST00000542355 TTLL11Q8NHH1 800 aa13.48□□□□□ -0.25
SCG3-202ENST00000542355 GPATCH3Q96I76 525 aa13.48□□□□□ -0.25
SCG3-202ENST00000542355 CICQ96RK0 1608 aaPredicted RBP13.48□□□□□ -0.25
SCG3-202ENST00000542355 TTC41PQ6P2S7 1318 aa13.48□□□□□ -0.25
SCG3-202ENST00000542355 SH3TC1Q8TE82 1336 aa13.48□□□□□ -0.25
SCG3-202ENST00000542355 ERC2O15083 957 aa13.47□□□□□ -0.25
SCG3-202ENST00000542355 PDE8AO60658 829 aa13.47□□□□□ -0.25
SCG3-202ENST00000542355 CTSWP56202 376 aa13.47□□□□□ -0.25
SCG3-202ENST00000542355 TAF7LQ5H9L4 462 aa13.47□□□□□ -0.25
SCG3-202ENST00000542355 ATG9AQ7Z3C6 839 aa13.47□□□□□ -0.25
SCG3-202ENST00000542355 TLR7Q9NYK1 1049 aaKnown RBP13.47□□□□□ -0.25
SCG3-202ENST00000542355 USP42Q9H9J4 1324 aaKnown RBP13.47□□□□□ -0.25
SCG3-202ENST00000542355 EYA2O00167 538 aa13.47□□□□□ -0.25
SCG3-202ENST00000542355 GLRX3O76003 335 aaKnown RBP13.47□□□□□ -0.25
SCG3-202ENST00000542355 HCLS1P14317 486 aaPredicted RBP13.47□□□□□ -0.25
SCG3-202ENST00000542355 IL15P40933 162 aaPredicted RBP13.47□□□□□ -0.25
SCG3-202ENST00000542355 TNNI3KQ59H18 835 aa13.47□□□□□ -0.25
SCG3-202ENST00000542355 USPL1Q5W0Q7 1092 aa13.47□□□□□ -0.25
SCG3-202ENST00000542355 AMIGO3Q86WK7 504 aa13.47□□□□□ -0.25
SCG3-202ENST00000542355 DDRGK1Q96HY6 314 aa13.47□□□□□ -0.25
SCG3-202ENST00000542355 PUS3Q9BZE2 481 aaKnown RBP13.47□□□□□ -0.25
SCG3-202ENST00000542355 GREM2Q9H772 168 aa13.47□□□□□ -0.25
SCG3-202ENST00000542355 FPGT-TNNI3KV9GXZ4 949 aa13.47□□□□□ -0.25
SCG3-202ENST00000542355 ZPR1O75312 459 aa13.46□□□□□ -0.25
SCG3-202ENST00000542355 ITGA6P23229 1130 aa13.46□□□□□ -0.25
SCG3-202ENST00000542355 BICDL1Q6ZP65 573 aa13.46□□□□□ -0.25
SCG3-202ENST00000542355 ARHGEF1Q92888 912 aaKnown RBP13.46□□□□□ -0.25
SCG3-202ENST00000542355 SRP68Q9UHB9 627 aaKnown RBP13.46□□□□□ -0.25
SCG3-202ENST00000542355 ZNF831Q5JPB2 1677 aa13.46□□□□□ -0.26
SCG3-202ENST00000542355 RREB1Q92766 1687 aa13.46□□□□□ -0.26
SCG3-202ENST00000542355 PHF14O94880 888 aa13.45□□□□□ -0.26
SCG3-202ENST00000542355 AK7Q96M32 723 aa13.45□□□□□ -0.26
SCG3-202ENST00000542355 NARFQ9UHQ1 456 aa13.45□□□□□ -0.26
SCG3-202ENST00000542355 EP400Q96L91 3159 aa13.45□□□□□ -0.26
SCG3-202ENST00000542355 COL5A3P25940 1745 aaPredicted RBP13.45□□□□□ -0.26
SCG3-202ENST00000542355 CIAO1O76071 339 aa13.45□□□□□ -0.26
SCG3-202ENST00000542355 NTSR2O95665 410 aa13.45□□□□□ -0.26
SCG3-202ENST00000542355 TRAPPC3LQ5T215 181 aa13.45□□□□□ -0.26
SCG3-202ENST00000542355 BCL2L12Q9HB09 334 aa13.45□□□□□ -0.26
SCG3-202ENST00000542355 ANKRD18BA2A2Z9 1011 aa13.44□□□□□ -0.26
SCG3-202ENST00000542355 TBC1D9BQ66K14 1250 aa13.44□□□□□ -0.26
SCG3-202ENST00000542355 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.44□□□□□ -0.26
SCG3-202ENST00000542355 CNTROBQ8N137 903 aa13.44□□□□□ -0.26
SCG3-202ENST00000542355 NUP98P52948 1817 aa13.44□□□□□ -0.26
SCG3-202ENST00000542355 HOXD11P31277 338 aaPredicted RBP13.44□□□□□ -0.26
SCG3-202ENST00000542355 TIMM10P62072 90 aa13.44□□□□□ -0.26
SCG3-202ENST00000542355 NEUROD6Q96NK8 337 aa13.44□□□□□ -0.26
SCG3-202ENST00000542355 BOLA2Q9H3K6 86 aa13.44□□□□□ -0.26
SCG3-202ENST00000542355 DBNLQ9UJU6 430 aaKnown RBP13.44□□□□□ -0.26
SCG3-202ENST00000542355 IGSF3O75054 1194 aa13.43□□□□□ -0.26
SCG3-202ENST00000542355 CHMLP26374 656 aa13.43□□□□□ -0.26
SCG3-202ENST00000542355 RFC4P35249 363 aa13.43□□□□□ -0.26
SCG3-202ENST00000542355 SLC27A3Q5K4L6 730 aa13.43□□□□□ -0.26
SCG3-202ENST00000542355 LDHAL6AQ6ZMR3 332 aa13.43□□□□□ -0.26
SCG3-202ENST00000542355 DBNDD2Q9BQY9 259 aa13.43□□□□□ -0.26
SCG3-202ENST00000542355 CEP126Q9P2H0 1117 aa13.43□□□□□ -0.26
SCG3-202ENST00000542355 RGS17Q9UGC6 210 aaPredicted RBP13.43□□□□□ -0.26
SCG3-202ENST00000542355 SBF2Q86WG5 1849 aa13.43□□□□□ -0.26
SCG3-202ENST00000542355 RBM25P49756 843 aaKnown RBP13.42□□□□□ -0.26
SCG3-202ENST00000542355 FBXO41Q8TF61 875 aa13.42□□□□□ -0.26
SCG3-202ENST00000542355 SETDB2Q96T68 719 aa13.42□□□□□ -0.26
SCG3-202ENST00000542355 GTF2E1P29083 439 aaPredicted RBP13.42□□□□□ -0.26
SCG3-202ENST00000542355 GPR108Q9NPR9 543 aa13.42□□□□□ -0.26
SCG3-202ENST00000542355 HSP90B1P14625 803 aaKnown RBP13.41□□□□□ -0.26
SCG3-202ENST00000542355 SLC4A3P48751 1232 aa13.41□□□□□ -0.26
SCG3-202ENST00000542355 TXNRD1Q16881 649 aa13.41□□□□□ -0.26
SCG3-202ENST00000542355 ERFEQ4G0M1 354 aa13.41□□□□□ -0.26
SCG3-202ENST00000542355 CNNM1Q9NRU3 951 aa13.41□□□□□ -0.26
SCG3-202ENST00000542355 RIPOR2Q9Y4F9 1068 aa13.41□□□□□ -0.26
SCG3-202ENST00000542355 BRWD3Q6RI45 1802 aa13.41□□□□□ -0.26
SCG3-202ENST00000542355 A0A1B0GUL7 405 aa13.41□□□□□ -0.26
SCG3-202ENST00000542355 REC8O95072 547 aa13.41□□□□□ -0.26
SCG3-202ENST00000542355 POTEAQ6S8J7 498 aa13.41□□□□□ -0.26
SCG3-202ENST00000542355 ESYT1Q9BSJ8 1104 aa13.41□□□□□ -0.26
SCG3-202ENST00000542355 USP26Q9BXU7 913 aa13.41□□□□□ -0.26
SCG3-202ENST00000542355 ANKRD36CQ5JPF3 1778 aa13.4□□□□□ -0.26
SCG3-202ENST00000542355 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.4□□□□□ -0.26
SCG3-202ENST00000542355 APBA3O96018 575 aa13.4□□□□□ -0.26
SCG3-202ENST00000542355 ATP5JP18859 108 aa13.4□□□□□ -0.26
SCG3-202ENST00000542355 CCDC152Q4G0S7 254 aa13.4□□□□□ -0.26
SCG3-202ENST00000542355 METTL24Q5JXM2 366 aa13.4□□□□□ -0.26
SCG3-202ENST00000542355 EVI5LQ96CN4 794 aa13.4□□□□□ -0.26
SCG3-202ENST00000542355 SEC31BQ9NQW1 1179 aa13.4□□□□□ -0.26
SCG3-202ENST00000542355 LY75O60449 1722 aa13.4□□□□□ -0.26
SCG3-202ENST00000542355 NBPF5PQ86XG9 351 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms