RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 RTL5Q5HYW3 569 aaPredicted RBP26.04■■□□□ 1.76
DDB1-220ENST00000542337 PNMA8AQ86V59 439 aaPredicted RBP26.04■■□□□ 1.76
DDB1-220ENST00000542337 MYD88Q99836 296 aa26.04■■□□□ 1.76
DDB1-220ENST00000542337 CLEC11AQ9Y240 323 aa26.04■■□□□ 1.76
DDB1-220ENST00000542337 LMOD1P29536 600 aaPredicted RBP26.03■■□□□ 1.76
DDB1-220ENST00000542337 EPHX2P34913 555 aa26.03■■□□□ 1.76
DDB1-220ENST00000542337 TSPYL6Q8N831 410 aa26.03■■□□□ 1.76
DDB1-220ENST00000542337 ZBTB38Q8NAP3 1195 aaPredicted RBP26.03■■□□□ 1.76
DDB1-220ENST00000542337 CCDC191Q8NCU4 936 aa26.03■■□□□ 1.76
DDB1-220ENST00000542337 RTFDC1Q9BY42 306 aaPredicted RBP26.03■■□□□ 1.76
DDB1-220ENST00000542337 AOC3Q16853 763 aa26.01■■□□□ 1.75
DDB1-220ENST00000542337 TWISTNBQ3B726 338 aaPredicted RBP26.01■■□□□ 1.75
DDB1-220ENST00000542337 METTL22Q9BUU2 404 aaPredicted RBP26.01■■□□□ 1.75
DDB1-220ENST00000542337 CWC25Q9NXE8 425 aaPredicted RBP26.01■■□□□ 1.75
DDB1-220ENST00000542337 POTEIP0CG38 1075 aa26■■□□□ 1.75
DDB1-220ENST00000542337 POTEJP0CG39 1038 aa26■■□□□ 1.75
DDB1-220ENST00000542337 SLC51AQ86UW1 340 aa26■■□□□ 1.75
DDB1-220ENST00000542337 SALL2Q9Y467 1007 aaPredicted RBP26■■□□□ 1.75
DDB1-220ENST00000542337 WDR63Q8IWG1 891 aa25.99■■□□□ 1.75
DDB1-220ENST00000542337 ZNRF3Q9ULT6 936 aa25.99■■□□□ 1.75
DDB1-220ENST00000542337 MAP3K2Q9Y2U5 619 aa25.99■■□□□ 1.75
DDB1-220ENST00000542337 SCN4AP35499 1836 aa25.98■■□□□ 1.75
DDB1-220ENST00000542337 NEXNQ0ZGT2 675 aa25.98■■□□□ 1.75
DDB1-220ENST00000542337 KSR2Q6VAB6 950 aa25.98■■□□□ 1.75
DDB1-220ENST00000542337 PCCAP05165 728 aaPredicted RBP25.97■■□□□ 1.75
DDB1-220ENST00000542337 KIAA2012Q0VF49 1180 aa25.96■■□□□ 1.75
DDB1-220ENST00000542337 CELF1Q92879 486 aaKnown RBP25.96■■□□□ 1.75
DDB1-220ENST00000542337 NSFL1CQ9UNZ2 370 aaKnown RBP25.96■■□□□ 1.75
DDB1-220ENST00000542337 PI4KAP2A4QPH2 592 aa25.95■■□□□ 1.74
DDB1-220ENST00000542337 SLC4A2P04920 1241 aa25.95■■□□□ 1.74
DDB1-220ENST00000542337 RPS8P62241 208 aaKnown RBP25.95■■□□□ 1.74
DDB1-220ENST00000542337 CCDC152Q4G0S7 254 aa25.95■■□□□ 1.74
DDB1-220ENST00000542337 FAM9BQ8IZU0 186 aa25.95■■□□□ 1.74
DDB1-220ENST00000542337 PI4KAP1Q8N8J0 262 aa25.95■■□□□ 1.74
DDB1-220ENST00000542337 CREBZFQ9NS37 354 aa25.95■■□□□ 1.74
DDB1-220ENST00000542337 PDE8AO60658 829 aa25.94■■□□□ 1.74
DDB1-220ENST00000542337 JMYQ8N9B5 988 aa25.94■■□□□ 1.74
DDB1-220ENST00000542337 TNIP1Q15025 636 aa25.93■■□□□ 1.74
DDB1-220ENST00000542337 COL4A5P29400 1685 aa25.93■■□□□ 1.74
DDB1-220ENST00000542337 C6orf229H3BNL8 230 aa25.92■■□□□ 1.74
DDB1-220ENST00000542337 CXCL9Q07325 125 aa25.92■■□□□ 1.74
DDB1-220ENST00000542337 WASHC4Q2M389 1173 aa25.92■■□□□ 1.74
DDB1-220ENST00000542337 CIAPIN1Q6FI81 312 aa25.92■■□□□ 1.74
DDB1-220ENST00000542337 LAMB2P55268 1798 aa25.92■■□□□ 1.74
DDB1-220ENST00000542337 FANCIQ9NVI1 1328 aa25.91■■□□□ 1.74
DDB1-220ENST00000542337 SCNN1DP51172 638 aa25.91■■□□□ 1.74
DDB1-220ENST00000542337 CNTROBQ8N137 903 aa25.91■■□□□ 1.74
DDB1-220ENST00000542337 EYA3Q99504 573 aa25.91■■□□□ 1.74
DDB1-220ENST00000542337 EPS15P42566 896 aa25.9■■□□□ 1.74
DDB1-220ENST00000542337 USP50Q70EL3 339 aaPredicted RBP25.9■■□□□ 1.74
DDB1-220ENST00000542337 JARID2Q92833 1246 aaPredicted RBP25.9■■□□□ 1.74
DDB1-220ENST00000542337 BCL2L13Q9BXK5 485 aa25.9■■□□□ 1.74
DDB1-220ENST00000542337 PASKQ96RG2 1323 aa25.89■■□□□ 1.74
DDB1-220ENST00000542337 ITGBL1O95965 494 aaPredicted RBP25.89■■□□□ 1.74
DDB1-220ENST00000542337 MAP1SQ66K74 1059 aaPredicted RBP25.89■■□□□ 1.74
DDB1-220ENST00000542337 MYH16Q9H6N6 1097 aa25.89■■□□□ 1.74
DDB1-220ENST00000542337 CDHR2Q9BYE9 1310 aa25.88■■□□□ 1.73
DDB1-220ENST00000542337 DDX60Q8IY21 1712 aaKnown RBP25.88■■□□□ 1.73
DDB1-220ENST00000542337 TMEM88BA6NKF7 163 aa25.88■■□□□ 1.73
DDB1-220ENST00000542337 RAD17O75943 681 aa25.88■■□□□ 1.73
DDB1-220ENST00000542337 GPSM2P81274 684 aa25.88■■□□□ 1.73
DDB1-220ENST00000542337 SEC31BQ9NQW1 1179 aa25.88■■□□□ 1.73
DDB1-220ENST00000542337 ADARB2Q9NS39 739 aaKnown RBP25.88■■□□□ 1.73
DDB1-220ENST00000542337 GPRC5DQ9NZD1 345 aa25.88■■□□□ 1.73
DDB1-220ENST00000542337 IGKV5-2P06315 115 aa25.87■■□□□ 1.73
DDB1-220ENST00000542337 EXOSC9Q06265 439 aaKnown RBP25.87■■□□□ 1.73
DDB1-220ENST00000542337 FLIIQ13045 1269 aa25.87■■□□□ 1.73
DDB1-220ENST00000542337 FKBP5Q13451 457 aaPredicted RBP25.87■■□□□ 1.73
DDB1-220ENST00000542337 G2E3Q7L622 706 aa25.87■■□□□ 1.73
DDB1-220ENST00000542337 ANKIB1Q9P2G1 1089 aa25.87■■□□□ 1.73
DDB1-220ENST00000542337 G3V3G9 751 aa25.86■■□□□ 1.73
DDB1-220ENST00000542337 RIMBP2O15034 1052 aa25.86■■□□□ 1.73
DDB1-220ENST00000542337 VAMP4O75379 141 aa25.86■■□□□ 1.73
DDB1-220ENST00000542337 GMPSP49915 693 aaPredicted RBP25.86■■□□□ 1.73
DDB1-220ENST00000542337 DCAF8Q5TAQ9 597 aa25.86■■□□□ 1.73
DDB1-220ENST00000542337 ANKRD18AQ8IVF6 992 aa25.86■■□□□ 1.73
DDB1-220ENST00000542337 CCDC85AQ96PX6 553 aaPredicted RBP25.86■■□□□ 1.73
DDB1-220ENST00000542337 ZC3H12CQ9C0D7 883 aaKnown RBP25.86■■□□□ 1.73
DDB1-220ENST00000542337 POLLQ9UGP5 575 aa25.86■■□□□ 1.73
DDB1-220ENST00000542337 NEURL1BA8MQ27 555 aa25.85■■□□□ 1.73
DDB1-220ENST00000542337 CDC5LQ99459 802 aaKnown RBP25.85■■□□□ 1.73
DDB1-220ENST00000542337 MKRN1Q9UHC7 482 aaKnown RBP25.85■■□□□ 1.73
DDB1-220ENST00000542337 CTSWP56202 376 aa25.84■■□□□ 1.73
DDB1-220ENST00000542337 CWF19L2Q2TBE0 894 aaKnown RBP25.84■■□□□ 1.73
DDB1-220ENST00000542337 TBC1D16Q8TBP0 767 aa25.84■■□□□ 1.73
DDB1-220ENST00000542337 GGA1Q9UJY5 639 aa25.84■■□□□ 1.73
DDB1-220ENST00000542337 DBNDD1Q9H9R9 158 aa25.83■■□□□ 1.73
DDB1-220ENST00000542337 PODXL2Q9NZ53 605 aa25.83■■□□□ 1.73
DDB1-220ENST00000542337 H7C1D1 291 aa25.82■■□□□ 1.72
DDB1-220ENST00000542337 UFL1O94874 794 aa25.82■■□□□ 1.72
DDB1-220ENST00000542337 DNAAF4Q8WXU2 420 aa25.82■■□□□ 1.72
DDB1-220ENST00000542337 TAF1P21675 1872 aa25.81■■□□□ 1.72
DDB1-220ENST00000542337 YDJCA8MPS7 323 aa25.81■■□□□ 1.72
DDB1-220ENST00000542337 H7C1W4 665 aa25.81■■□□□ 1.72
DDB1-220ENST00000542337 UBE3BQ7Z3V4 1068 aa25.81■■□□□ 1.72
DDB1-220ENST00000542337 ECE2O60344 883 aa25.8■■□□□ 1.72
DDB1-220ENST00000542337 GCKRQ14397 625 aa25.8■■□□□ 1.72
DDB1-220ENST00000542337 DOK7Q18PE1 504 aa25.8■■□□□ 1.72
DDB1-220ENST00000542337 TTLL11Q8NHH1 800 aa25.8■■□□□ 1.72
DDB1-220ENST00000542337 CNOT7Q9UIV1 285 aaKnown RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms